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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0358800 |
| Transcript ID | LotjaGi5g1v0358800.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein phosphatase 2c, putative; TAIR: AT1G43900.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q8VZN9|P2C11_ARATH Probable protein phosphatase 2C 11; TrEMBL-Plants: tr|I3T109|I3T109_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0358800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67330437..67334157) extracted from Lotus japonicus Gifu genome v1.2.
ATGATCTCAGACACAGAACCTGAAGAACACGCCAACGCGGCCACCGTTGCCGGAAAATCCTCTGCCGGTTTTTCCTTTGA TGATCATCTCGCACCGCCGGCAGCTCCAAACATTGTCATGTCCTCCAAGGATCACGATTCTCTCTTCAGTGGTGGCGGTA TCAGGTTGCTATTTGGATTGCTTGATTCTGAGCTATTCTTTCTCTTGATTCTCTTTTCTATTCATTTCTGGATGTTTGAA TTCATTGAATTGATCATAGAAATGAACGGTGTCGTTTGTTCTTAAGATGGTTAGGAAATTAAGATAGCTGATTCCTGAAA TTGGTTTCTGAATTGCATTGTAAATTTTCAATGTCATCGTTTAGACTATATATAATTATGTGTTATGATACGACTATGTA TACTTTGATATTTTTATGAATTATATACTTATATGTTATGACTATCTCATACTAGTTTTTGAATGATTGGCATTTGGTCT GCTCCTTCTTGCTATTGAAAAATGTTGAGAATGAATGACATTTTAATTTCTATATGTATGTTGCAGTTAGTTAGGTATTA CCTTTTATGGCTTTACCATGCATCTTTCCTTTTATAAAGTAGGGTTGTCATAGCGCGCTAAAGCAGCGCTTTATGTAGCG GTGCCAGTGATTACTCCTAGTCGTTGTGTAGCGGGGCAGTTTAGTGTAGCACGATCTTTGCGGCCGCTTAAGTGGAGGAA ATTACGGGCAGCGCTATTTGGCGGGATTGATGAAAACCCAAAATATGCCCTCACAAAGTTAATGTTTTGGCATTTTTGGG AAGTGTTCACTCAGTTGAATGATTATTTGATATATACAGCATAATCTTTTCGGAACAGGGAAAATATCATGGAAAAGTGT GATGATGACATAACTGTTTGCTTACTATTAACTGTCAATAATAGGAATCTTTTTATTAAATTTCTGTGAAGAAAAACCTG GGACTTGTGAAATTTTGTTGCTGGACCGAGTGTAGTAACTTGGTAAAAACAATGGCTAATGGCAAGAATTTGTGCCAGAC CTAGCTTGAGAGGCTGCACCAATTATAGGTGTCATAGGCTGGGGTGTTGAGCATAGTGAATCCTTGAGGTGAATTAAGCT GAACCCCCCCAACCCCCGAAGTGCGTTGTTGTCCCTTTTGTGTTATATAACAGCCTTCCAACTTTCAAATATTTAAAAAT TTGAAAATGAGTAACTTGCATTTATTTCTGTTTAGCCTTCTGTCTGGAAGTCGAAATGGAAGGTTCAGCTATGGATATTC CAGTTTCAAGGGTAAAAGATCTTCAATGGAGGATTTTTTTGAGACCAGAATATCAGAAGTTGATGGTCAGATGGTTGCCT TTTTCGGTGTTTTTGACGGTAAGTTTTAGGTTTTTATTTTGCATCCCTTAAAATTAATCCTTTAGCCTCCCCGCTCCCCA ATTTTGTTTGATGGGCTTGATGATTCTGTTTCCCTTTTGGTTTTCTGCCATCTTTATTGTCTTTGCTATTGGGTTTATTC TATTGGTGCGATTCTTTCTGTCATAGGATCATTTGTGACTATAAGACTCTCTAAAGTAAACAAGGGTGTATTCCCAATTT AGATAATTTTATGTGTATAATTATGTTAACACACTAAATTTTGTGGGTTGATATGCCCTTGTTCATGTAATAGATAAACT CACTTTAAAAGTCATTTTCAATATGTTATGGGTTTATGGTGGCTATTGTGTAGGTTTTGAATTTGTTGAGGGAGGGGTTT AAGGTTCCGTGATTAGGTTAGAAATTTAGAAGTGACAGAATAGCAGAAATAGGCATGATAGATGATCGCCCGTTGGAATT ATTAGACAGAAGCAGAAATAGGACTTGTAGATTGAGGAAAAGGAATTTATATAGCGGCTGATGATATGGCTTATGGTTCC TGATTAGACAAGCATTCCTATAAAATTGGGAGAAGAAAATCAAATTACTCATAACAATGATTGTATCCAATCATTTTATG ATCAGAAAATGAAAGAAAGTCGCCAATGCTCAATACAGCAAAGATGGAGCTGTAATACCCAAACCTTTTTGGGGTTGATT TTCAATTCCGTAATAAAATTGGAAAGCATGTAGGTTATTTCATATTGGCATGTCCGTTTCGTGCATATCTTTGACGTTAT TTATTTATTTTAATCTTTTTAGGTCACGGAGGTTCTCGGACTGCAGAATACCTGAAAAACAATTTGTTTAAGAATTTGAG TAGCCATCCCGATTTTATCAAAGACACCAAGACCGCAATTGGTAGGAGCTTCATTTATCTAAAATTATATATGTAGTGAA ATTCTCATATAACATTATAGTTGTGTGGTTTGTTACCTGGATGGTCTAAATATGAACATATGTTTGTTCTAATTGTTTGT CTTGTTACAGTTGAAGCATTTAAACAGACAGATGTTGATTACCTCAATGAGGAAAAAGGACATCAAAGGGATGCTGGGTC CACTGCATCAACAGCTGTATTGTTGGGTGACCGCATTCTTGTTGCAAATGTTGGCGATTCCCGAGTAGTTGCGAGTAGAG CTGGTTCAGGTTGGTGCCATGTGAATTAGGGGTGAAAGAATTAGATTTACATTGGGCAGGATATGCATTTTTAATTGGGT GGTGAATGGAGGGATATGCAACATATTTCCTTTCCCTGTAGTACACTGTCAAACATGGTTTTTGGTTATGTCAGTTTTGC TAAGTTACGGGCTTCATGCTTTTGCAACATACACTAAAATTTCAAATTGCTTTTAGTAGTTTTTTTGTTGAGATCCTACA TCGACTAGAAATATGACTGAAGTATATCTTAGCTAGGACATTGGGTCTATGGGTTTCTAATCTTTTATCTAGCTCATTGC TAACCAATGTGGGCTTCAAGCTCACACTTGAGTTCCCAACACAGCTCAAGAAGCAATATAATTTCCTATATCCGTCCCTC CTTTCCCCCTATTATCTGATATAAATGTTTGTGTTTCACTGCAGCTGTTCCTTTGTCCGTTGATCACAAACCTGATAGAT CTGATGAGCGTCAAAGGATTGAGCAGGCTGGGGGATTCATAATTTGGGCAGGTAAATGTCCATCCTTTATGGGTGTTTCC TATTTTTTATGGTTCATAGTAAATTACTTTCTCTATTGCTGGTTAATCCAGGAACCTGGAGGGTTGGTGGTGTTCTTGCT GTTTCTCGTGCATTTGGAGATAAACTTCTTAAGCCATATGTTGTTGCTGACCCAGAAATTCAGGTTGCCTAAGATCTTAA GTTTTGTCACCCTTTGCCATACCTGTGTTGTTATAGATCTTCTATCCGCTAACTTATCCCCCTTTTTGGCACTGGTTTGG CCCAGGAGGAAGAGATTGATGGTGTAGATTTTATAATAATAGCTAGTGATGGTCTTTGGAATGTCATATCAAACAAGGTG AGGCTGGAAGTGTTTATTTTGAAATTTAAATTTGTGTTCTCGATTTTATTAGTTATTTTTTAGGCCTATGAATGTTAACA TTTTAAAGTAATTTGGGAAAAAATTCTTCAATGGAACCTAAGCATCTGATTATGCCATCCCTGCCTTTTCAGGAAGCGGT GTCTTTGGTACAAAATATCACAGATGCGGAAGTGGCATCCAGAGAACTAATTAAAGAAGCATATTCACGAGGAAGCTCAG ACAACATCACTTGTGTTGTTGTTCGATTCGATCTATCCTGA
CDS sequence (LotjaGi5g1v0358800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCATCTCGCACCGCCGGCAGCTCCAAACATTGTCATGTCCTCCAAGGATCACGATTCTCTCTTCAGTGGTGGCGGT ATCAGGTTGCTATTTGGATTGTCACGGAGGTTCTCGGACTGCAGAATACCTGAAAAACAATTTGTTTAAGAATTTGAGTA GCCATCCCGATTTTATCAAAGACACCAAGACCGCAATTGTTGAAGCATTTAAACAGACAGATGTTGATTACCTCAATGAG GAAAAAGGACATCAAAGGGATGCTGGGTCCACTGCATCAACAGCTGTATTGTTGGGTGACCGCATTCTTGTTGCAAATGT TGGCGATTCCCGAGTAGTTGCGAGTAGAGCTGGTTCAGCTGTTCCTTTGTCCGTTGATCACAAACCTGATAGATCTGATG AGCGTCAAAGGATTGAGCAGGCTGGGGGATTCATAATTTGGGCAGGAACCTGGAGGGTTGGTGGTGTTCTTGCTGTTTCT CGTGCATTTGGAGATAAACTTCTTAAGCCATATGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAGATTGATGGTGTAGA TTTTATAATAATAGCTAGTGATGGTCTTTGGAATGTCATATCAAACAAGGAAGCGGTGTCTTTGGTACAAAATATCACAG ATGCGGAAGTGGCATCCAGAGAACTAATTAAAGAAGCATATTCACGAGGAAGCTCAGACAACATCACTTGTGTTGTTGTT CGATTCGATCTATCCTGA
Protein sequence (LotjaGi5g1v0358800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIISHRRQLQTLSCPPRITILSSVVAVSGCYLDCHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNE EKGHQRDAGSTASTAVLLGDRILVANVGDSRVVASRAGSAVPLSVDHKPDRSDERQRIEQAGGFIIWAGTWRVGGVLAVS RAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYSRGSSDNITCVVV RFDLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 30 | 30 | 6.0 | – | |
| SMART | 2 | 240 | 239 | 1.9E-72 | ||
| ProSiteProfiles | 18 | 242 | 225 | 44.592 | ||
| PANTHER | 23 | 243 | 221 | 6.7E-129 | – | |
| PANTHER | 23 | 243 | 221 | 6.7E-129 | ||
| Gene3D | 25 | 244 | 220 | 2.8E-75 | ||
| Pfam | 30 | 235 | 206 | 1.9E-57 | ||
| CDD | 33 | 242 | 210 | 2.78456E-79 | ||
| SUPERFAMILY | 33 | 243 | 211 | 2.49E-65 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi5g1v0358800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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