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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0362600 |
| Transcript ID | LotjaGi5g1v0362600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 2-isopropylmalate synthase; TAIR: AT1G74040.1 2-isopropylmalate synthase 1; Swiss-Prot: sp|Q9C550|LEU12_ARATH 2-isopropylmalate synthase 2, chloroplastic; TrEMBL-Plants: tr|I1NJA5|I1NJA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0362600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67689182..67695464) extracted from Lotus japonicus Gifu genome v1.2.
GCGGCCAACGCGATACGCACCCCCGTCGTCTCTCCTTCCACCTCCACCTGCTTTCCCTCTTCCCCCAACCACCGCGTCCT CCTCCGCCTCCACTTCCCCCAATCCTCTAAACAACACCGCTATTGCTCCTCCTCTTCTTATCCCAAATTCACCGTTTCCT GCTCCCAATTCCAACCTGAAACCACTCGCCGGCGTCCTCCTTACATCCCGAACCACATCCCTGACCCTTCCTATGTTCGC ATCTTCGACACCACCCTCCGCGACGGCGAGCAGTCCCCCGGCGCCTCCATGACCTCCAAGGAGAAGCTCGACATTGCCCG CCAGCTTGCCAAGCTCGGCGTTGACATCATCGAGGCCGGCTTCCCTGCCGCCTCCAAGGACGACTTCGAGGCAGTCAAAA TGATCGCGCAGGAGGTTGGAAACGCCGTCGATGACGAAGGCTACGTTCCCGTCATCTGTGGCCTCTCCAGGTGTAATGAG AAGGATATTCGAACCGCTTGGGATGCCGTTAAGCACGCGAAGAGGCCCAGGATTCATACCTTCATTGCTACCAGTGGCAT TCACATGGAGTACAAGCTCAGAATGTCTAAAGAACAGGTCATTGACAAAGCCCGCAGTATGGTCAAGTTCGCCCGCAGTT TGGGCTGCAATGACGTCGAGTTCAGTCCTGAAGATGCTGGCAGGTCAATTGCTCTGTGACTCTTTGATTTTGATCAATTC ACTCAGTGTTTAGATTTATTAAGCTCAAGTTGAACCACATTTTCATCATACTGAACTAAAATGTAGAAAATGGTAATCAT ATTTGCATTTTGTATAAAAGCAAAAACAAACACACACTCAACTTTGTCATTGGAAGGAACTAGTAGTTAACTATAAGTAT TGTTTTGTTTTGTTTGTCTTTATGGTAGCAGATCGGAGAGGGAGTTTCTTTATGAAATTCTAGCAGAAGTTATCAAGGCT GGGGCCACAACCCTTAATATACCGGACACTGTTGGCATAACGATGCCGAGTGAGTTTGGGAAACTGATTGCTGATATCAA AGCTAATACCCCTGGAGCAGAAAATGTTGTTATTTCCACCCATTGTCAGAATGATCTTGGGCTTTCTACCGCAAACACTA TAGAGGTAGGTGTTCTATTCCCATGCCTTTGCCCATTGGTACGGTGCGAGCAATCAAAATATGTTCTGAATTTGTATGCT CTTCTCTTGACAGGGTGCACATGCTGGTGCAAGGCAACTGGAAGTAACAATTAATGGGATCGGTGAAAGGGCTGGAAATG CCTCATTAGAAGAGGTGAGGAGGCCCCATCTTCTATTCTCTAGTTGATGCAATCACCATTGCTGGAGCAGAAGCTTAATC ATCGAATATTTTGTTGAATGCCTATATATATTTTTCCGTCAATAACTGTGTAATGGAGGGTTCTATTAATCTATTTTTAA GTTTTTGGAAATTCACTTTCTGTTTGTTGTTTCAAGGTTGTGATGGCCCTAAAATGCGGAGGACATGTCTTTGGCAATCT GTACACTGGCGTTAATGCAAAGCACATCTACCTGACAAGCAGGATGGTTTTATATCTGAACTGATCTTTCTGTTGTTTCT TTTCCCTTTTAAAGACCTTCATTGATTGTTTGGTGTGTCATAATCTTTTGCTGTAGGTCGAAGAGTACTCTGGTTTGCAG TTACAACCGCACAAGGCCCTTGTAGGAGCTAATGCCTTCGCTCATGAAAGTGGCATTCATCAGGTTGGTTATGATAATCA GAATTAGTGGTATGAAAGAGTGAGCCTCGGTACAAGGTTGCGGCCTTGTGGCTTGGTGATCACTGGTTCTAATTTTGAAA CCTCCCTCTCTGCTTACATGTGTATTGTTGAGTAAATGTACATCTAACCCTCCCCAAAGCACACAGGGGTTTGAGCCTCA TACACAGGCTTCCCTTCCCTTCCCCTCCTTTACTTTTTGTTTTTCAATTTCAAGCTCAGTTCAAAGATAATGTTGGATTG TTTAAGTTAAAGAATAATTGATTTGGTTTCCTTGTGAGACTCAATCCAGAGCCACATTAATGTTTTGTTTTGGTTCGTCT TACTTGTGAACAATTGATTTGGTTTCCTTGGCATAATAATAGAACCAGGTTTCAAAACTATTTTTTTATGGGTGCAGTAC ATGTCTTTTGTCTGTTTTACGAGCTAGTGCATTTTACTTTTGGGAGAATTAAAAATAACTTGTGATAGTTGATACACTAT GAAAGAAGAATAATTACTTAGTGTGGTTATTCAAACCAAATTTAACCGATATATTATGCATTATTGACCACTGTTTTGTA GGACGGAATGTTAAAACACAAAGGTACATATGAAATAATATCTCCTGAGGACATTGGCCTTGAAAGATCCAATGAAGCTG GTATTGTACTGGGAAAGCTTAGGTATGCAATTTATATATTTTAGAAACTTATATTATATCTGTGTGGATCTGGTACTGTT AGGACCCGAAAATCCTAACAGGGAAATCGGTAGAGGAAAGAGGACAAAAGGAAATATTTTTGGTATTTTATTATAAAAGA CTGGAAAATAAAGATAGATAAGAACTAAGAGGCTGGTTCCTCTTAGAACCAAGAGGCTGGTTCCTCTTCAATAGGGTTGG TTCCCTTTACAAACTCAATAATCTAATCCATGATTCTAACCTAAGGAGGGCACTCCTATTTATAATAACTAATCCTAATA TCAATAACTTAATCCCTAAGAAATACAGAAGATATACTACTAGAATAAGAGATAACATCCTAATATAAAAGATACTATAA AGATAGATTCCTAAATTAAATCCTAATATAATTAATCCTAACAATACTCCCCCCCTAAAATCAACCTTGTCCTCAAGGTT GGAAGTAGCATAGTAGATCCAATCTTCCCCTCCCGGGTCCCATTGTAGGCGGCAAACCGAGTGAAGCACCAGAACAGCAA GTGTCCAAGTGTCCATATCTGGCGGCATTGGAGGAGGTCGCTTGGACAACACATTGAGGACCCATGGTTGCATTTGCATT GAGTCCTTATCCCTCCGCATCGAGTCACCATCTTCATCCAGAAAGCCCATTATTAATTGTGTACTGAATTGGTTGGAAGC CCCTACTTTGTAAAACTTTTCATTGTGAAGCGCGTTCACATTCATTGACATTGGAGCATCTTCTATAGAGATTGTGCTTC CAAAAGACTTAATACTAGAGATGTGGGGTATAATGGCAGCATCGCTGGTGAGACCTTCCATTGGCAAAGCAGTGTCTTGC TTGGACTCATTATAAATTTCAGAAGTAAGCGCAACATGTTGATTGCTTGAGTCCTCCTTGAGTACATCTTCGCTTGAGTC CTCCTTGAGTTCGTTTTCTGCTTCCACCAAAATACTAGCAATGGTTTCCCCTTCGATGTGAGAAGGAGTAGGAAAAGAAA CTGCATCAGCCGGTGGTTGTTCTTGAGCAAGTCGGAATTCGACATCTCGTGCAAGCTCTATGGCGTGCGACGCATTGGTA GGGCGTAAAGAACGCACCCGCCAACGAATCTGTGGCTTGAGGCCATGTAGAAAATAACCCAACAACAACTGAAGTTCCGA CAAATTTGGAATTCTGGTCATCAAAGCTTTAAATTCCAGCACATACGCGTCAACACTACCTCCTTGTCTAAGAGATCGCA GCCTCATGGAAATAGTATTATAACGATCGTCACCAAAACGCCGAAGCAAGAGTATGATGAATACATTCCAAGTAAGCTTG AGATTACGAAAACAGTAACAATAAAACCAATGAGTGGCTGCTTCCCCGTCCATGCTAAGGGATGCCAACTGCAACTTATC TAGATCCCGCAAACAGTGTACCTCGAAGATTTTCTGGGCTCGAGCGATCCAGCAAACTGGATCCACCCCGTCAAACTTGG GAAACTCCTCGACAATAGTCTGCCATTCTTCCATTGAAAGGACCATGATGTCCAGAACTTCTGTAAAAAATACAATATTA GATCCTAAAATAAAAGATAGAATCCTAAATTAAAATAAATTAATCCTAACAGGTACACCGTGCTAATTCCTCCTTATGTG CTTCTCAATTTCTTTAGAATTTATCAACTCTTTCATTAAGTATTATATCTATATGTAGCTGTAGCCTCAGTGGTTACTAT CAACAGACTTAATGAAACAAATTGTAATAATTTTTAATCTGTCCTTCTTTACATACACTCTAAGTGATTGTTAAGTATTA GGCATGATTTGTGTTATTTATCCATTGTTTGTTTGTCACTAGTTGTAGTATTTGATGTTCTATTATGCATTGGCTAGAGT ATTTAGCATTTTATTGTGGAGATTTGTATGTACTTATATAAGTACTGTATCACTAGTATATTTTCAGCAGCATTTTGACT GGTGTTTCTCTTTATTTGTTATTGTTGTCATGTTAATGGTTGTTTCATGTCTCTTACTTCCTCTGGCGGCGTGTCCAATT AAATTGTCTGTTATTTTATTTCATCCTTCTAACATACACTTATACTCCTATTGATATAGTGGACGGCATGCTTTGAGAAA GCGACTTCAAGAGGTATTCAAATATTTGATATAGTGGAATGCATGCTTTGATATAGTGGACGACATCCTTCTAAAGGCTT TTTGAATGTTTTCTTCTGATATATGAGTTATTCTCTATTGTTTCAGCTTGGTTATGAACTTAAAGATGACCAAGTTGAGA GTTTATTTTGGCGTTTCAAAGCAGTTGCTGAGCAAAAAAAGGTATTTTTGAACTAGTGATTTTCTGTTAATTCTTTTGCT TTCAAGTGCTTCTGATTATAATGTGCAAGTCACTATATCTAGCACTTGGTCAGCACTCGGTCATGCATTTAATATGGTCA GTTATAAATGGAGGTAGTAGTATCTCTTTTCTGTACAGAAGCATAGTTGGACTGTAAAATAATAAGACATCTGCTGGTTA ACTTTCTGTTATTTTGAATCAGAGGGTTACTGATGCTGACCTCAGAGCATTGGTATCAGATGAAGTCTTTCAGGCAGAGC CTGTTTGGAAACTTGGTGATTTGCAGGTGAATTGAAATATTCTCTGAAATTTCAATATTTATAGTGGCTTGACAAATGAT AGAATAGAACAAACATAAGCTAATCAAATATTTACCCAGTGCAGGTGACTTGTGGAACTCTTGGTCTTTCAACTGCAACT GTTAAACTTGTTAGTGATGATGGTAGCACGCATGTTGCTTGTGCCATTGGTACAGGACCAGTGGATTCGGCTTACAAGGC TGTTGATCTAATAGTAAAGGTTTGTATCGCTTCCTACTCTTTGTGCAAGTATTTTTCTCTCCCATTTCCTTTGATTCAGT GCAAGGCATTTTATGGTATTCTTTTGGTCCAAATACTCACATTTTAATGGTTAAAGTTGTTGTGGTCTTTTACCTTGTCC TGAGATTGAGGCTTTCATATGAAAAAAAAATTAAAATAATTTTATTTTTCAAGTTTAAGTCATAAAACTACTACTTGACA TCATCAGTAGTGCAATTAGGAGTATTAACTGGATTTGGTTCATATTGCTTTGTCTCAAGTTATGACTTATGAGAGAGAAA GGCCAGAAACAAGATTAATGCACAAACAGTGGATTTGGTATTGTAGCTGTTTCTGTGTCTTTCATAACATGAGAGAAACA TGAAAGGATCAAATTCTGTATCAAGTTAGGGTATTGCAACACATTACATCCTATAAATAATATCTTCAATTTATTTTTGT TAACCATCTTTCTCTTTTCTTCTTCCATAACCATAATTCTATAAGTCAGACTGTAACTCCTTATATGTTTCTTGATCTCC TTGATTTGCGTATTTATTTAATTATGCTGGAATTGTGAGCACTATGAGTATGATAGAGGATTTTTTTTTATCTTTTATGC AGGAACCAATAACCCTTCTTGAGTACTCAATGAACGCAGTCACCGAAGGCATTGATGCAATTGCCACTACAAGAGTTGTA ATTCGCGGGGAAACAGATCATACATCTACTCATGCCTTGACTGGAGAAACTGTGCATCGAACATTTGGGTAGGGTGAATT CTTCAGCGGATTACTTTAGTTCTTTCTAATGATCCAGGGACATTATGTTTTTTATTTTATTTTTTAATAGTGGGAGCGGA GCAGGAATGGATGTTGTTGTTTCCAGTGTCAAGGCCTACGTTGCTGCAATAAACAAGATGCTAGGTTTCAAGGATACATC TCCATCTACTGAAAAAATCCCAGTTTCTGCATCAAAGGTTTGA
CDS sequence (LotjaGi5g1v0362600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGAGTGAGTTTGGGAAACTGATTGCTGATATCAAAGCTAATACCCCTGGAGCAGAAAATGTTGTTATTTCCACCCA TTGTCAGAATGATCTTGGGCTTTCTACCGCAAACACTATAGAGGGTGCACATGCTGGTGCAAGGCAACTGGAAGTAACAA TTAATGGGATCGGTGAAAGGGCTGGAAATGCCTCATTAGAAGAGGTTGTGATGGCCCTAAAATGCGGAGGACATGTCTTT GGCAATCTGTACACTGGCGTTAATGCAAAGCACATCTACCTGACAAGCAGGATGGTCGAAGAGTACTCTGGTTTGCAGTT ACAACCGCACAAGGCCCTTGTAGGAGCTAATGCCTTCGCTCATGAAAGTGGCATTCATCAGGACGGAATGTTAAAACACA AAGGTACATATGAAATAATATCTCCTGAGGACATTGGCCTTGAAAGATCCAATGAAGCTGGTATTGTACTGGGAAAGCTT AGTGGACGGCATGCTTTGAGAAAGCGACTTCAAGAGCTTGGTTATGAACTTAAAGATGACCAAGTTGAGAGTTTATTTTG GCGTTTCAAAGCAGTTGCTGAGCAAAAAAAGAGGGTTACTGATGCTGACCTCAGAGCATTGGTATCAGATGAAGTCTTTC AGGCAGAGCCTGTTTGGAAACTTGGTGATTTGCAGGTGACTTGTGGAACTCTTGGTCTTTCAACTGCAACTGTTAAACTT GTTAGTGATGATGGTAGCACGCATGTTGCTTGTGCCATTGGTACAGGACCAGTGGATTCGGCTTACAAGGCTGTTGATCT AATAGTAAAGGAACCAATAACCCTTCTTGAGTACTCAATGAACGCAGTCACCGAAGGCATTGATGCAATTGCCACTACAA GAGTTGTAATTCGCGGGGAAACAGATCATACATCTACTCATGCCTTGACTGGAGAAACTGTGCATCGAACATTTGGTGGG AGCGGAGCAGGAATGGATGTTGTTGTTTCCAGTGTCAAGGCCTACGTTGCTGCAATAAACAAGATGCTAGGTTTCAAGGA TACATCTCCATCTACTGAAAAAATCCCAGTTTCTGCATCAAAGGTTTGA
Protein sequence (LotjaGi5g1v0362600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSEFGKLIADIKANTPGAENVVISTHCQNDLGLSTANTIEGAHAGARQLEVTINGIGERAGNASLEEVVMALKCGGHVF GNLYTGVNAKHIYLTSRMVEEYSGLQLQPHKALVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGLERSNEAGIVLGKL SGRHALRKRLQELGYELKDDQVESLFWRFKAVAEQKKRVTDADLRALVSDEVFQAEPVWKLGDLQVTCGTLGLSTATVKL VSDDGSTHVACAIGTGPVDSAYKAVDLIVKEPITLLEYSMNAVTEGIDAIATTRVVIRGETDHTSTHALTGETVHRTFGG SGAGMDVVVSSVKAYVAAINKMLGFKDTSPSTEKIPVSASKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 93 | 93 | 26.126 | ||
| PANTHER | 1 | 353 | 353 | 2.8E-192 | – | |
| PANTHER | 1 | 353 | 353 | 2.8E-192 | – | |
| SUPERFAMILY | 1 | 117 | 117 | 8.61E-30 | – | |
| Gene3D | 1 | 105 | 105 | 6.5E-32 | ||
| Pfam | 2 | 99 | 98 | 3.8E-25 | ||
| Gene3D | 106 | 221 | 116 | 5.0E-38 | – | |
| SMART | 198 | 343 | 146 | 1.6E-27 | ||
| Pfam | 199 | 343 | 145 | 1.8E-38 | ||
| Gene3D | 228 | 343 | 116 | 1.7E-6 | ||
| SUPERFAMILY | 229 | 342 | 114 | 8.63E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | 2-isopropylmalate synthase activity | Catalysis of the reaction: 3-methyl-2-oxobutanoate + acetyl-CoA + H(2)O = (2S)-2-isopropylmalate + CoA + H(+). | ||
| Biological process | Leucine biosynthetic process | The chemical reactions and pathways resulting in the formation of leucine, 2-amino-4-methylpentanoic acid. |
Expression pattern of LotjaGi5g1v0362600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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