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LotjaGi5g1v0362800.11

Overview

Field Value
Gene ID LotjaGi5g1v0362800
Transcript ID LotjaGi5g1v0362800.11
Related isoforms 11
Lotus japonicus genome version Gifu v1.2
Description Protein kinase-like protein; TAIR: AT3G59350.6 Protein kinase superfamily protein; Swiss-Prot: sp|B9DFG5|PTI13_ARATH PTI1-like tyrosine-protein kinase 3; TrEMBL-Plants: tr|C6ZRT7|C6ZRT7_SOYBN Serine/threonine protein kinase; Found in the gene: LotjaGi5g1v0362800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:67709269..67712475) extracted from Lotus japonicus Gifu genome v1.2.

AACAACACTGGTATATGTATATATTGGTTTTCTTTTGAACAATCTTTAGTTCAAATTTTTGCGGTCCTTCATAATGTATC AGATGGTTGGCTCCTTTCCTGGTAAAGATTTTCTATGTCTCAAATTTTATTTTCAATAGGCAACTCAAAAGGCTCAAAGG CTTCAGCTCCTGTCAAGCATGAAACACAAAAAGCACCACCACCTATCGAAGTTCCTGCATTATCCTTAGATGAGCTCAAG GAGAAGACTGACAACTTTGGATCAAAGGCATTGATTGGTGAAGGATCATATGGAAGGGTGTATTACGCAACCTTAAATGA TGGAAACGCTGTGGCTGTGAAGAAGCTTGATGTTTCTTCTGAACCCGAAACAAATAATGAATTTTTGACTCAGGCATGTC GCTGCTATCAACTAAACAAACTATTCGAAATTATACACTGGAAATATGTTGGTTTCTGTATGGTTATTGTCTGGATATTA GCCTTCTCATTAAATTTTCCTACTTCAGGTTTCCATGGTCTCAAGATTGAAGAATGACAATTTTGTTGAGTTGCACGGTT ATTGTGTTGAAGGAAATCTTCGAGTTCTTGCATATGAGTTTGCTACTATGGGCTCTCTTCATGACATATTGCATGGTATT TAGCTTCATATCCCGTCCTAACTTATGTTTCATATCTTAAGAAGTTCATCTGATGATTTTTGTTGTCTTTCCATTACAGG TAGAAAGGGAGTTCAAGGGGCACAGCCAGGTCCAACTCTTGATTGGATACAGCGTGTTAGAATTGCAGTTGACGCTGCAA GGGGACTAGAATATTTGCACGAGAAAGTTCAACCGGCTATTATTCACAGAGATATCAGATCAAGTAACGTGCTTATCTTT GAAGATTACAAGGCTAAGATAGCTGATTTCAACCTTTCTAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCTACTCG AGTGTTGGGAACTTTTGGGTATCATGCTCCAGAGTAAGCTTCCTGGACCTGCTTACTTATAATTTATTTATCTATATTAT CCTCGTTGCCATACATAGATCTGTGTGTCTGCTATCTTTTATTTATGAAGAAAGATTGTTTTTAGTGCTGCCTGAGTTAT CTTTTTACATACCAGTGTTGTCAATCCGGGAATGTGGCCCACCCCATAGTGGTATAGCGTATAGCGGGATGGCCGCTACA TTGTTTTTTTTATATAATTTATACTATCTGCATATAAATGATAAAAGTACTCAAAATTAATGACATTCATAATTAATAAT AAAATTCATGAGATTTTTACTCTTTTAAACAAAGTATACCAGTGAAACAATGAAAGATAAAATAAATGAATAGAAACAAA ACAGAGGAAGCTGTTGGGAAAGATAAATACAAAACCATGAAATAAGAGAAAGGGGAGATGGAGGACGAAGGGAGATGAGT GTGGCCGGAGCCTGGCCGCAAGTTGCGGGAGTGAGGAAGAAGATAGATCGAAGGTTTGGAGGTTAGGCAGAAGGGAGAAG AAGCGGGAGAGTGTATACCCAATTTTTCAGAACTGAACCCCATTTTACTCTTAAAGTTATAACCTAATGGCGTCTTTTTA AGGGTAAAATAGGGATTAAAACCCTAAAAACTGTTGCGCAGCTATAGCGCCTGCGGCACTCGATTCAGGCTGCGATGCTG AAGCGCTACAGCACTCCACTACAGCACTCCTGTCGCTGACGGCGGCCGCTTCGCTGTTATAGAGCTCTATTGATGTCCCT GTTACACACTGACACCGCTGCAATTCATGATTTATTGCTGAGGACTATAAATTAATATTTGACCTCGAATAATTTATATT CTGGTCTTCTTGTCATCTGATTCATTTTTGATTTTCAGATGTCTTTAATGGATAGCTGCTGTGTCCATGTTTCCTTTTCC AGTTCTCTTTGATTTAATACATGTAAATTCAATTCAAATGTGAAATCTTTTAGTTATACTTGATGATAAGTAGTAACTCT TGACTGGTAAATTCAATTCAAATGTGAAATCTTTTAGTTATACTTGATGATAAGTAGTAACTCTTGACTGGTAAGTTATG GTCCATAGACGCATATGATACTACTCGTGGTAGTATCATTACTGGCTTCTGATGTGGTTGTGGTCTTGCTATTTTTTCCA CGTAGTCCCCAATGATTGGCTTGAACTTTACTGTTAGTGAATTTGATGAACAAGAAATACAGTACAGACCCTCTTATATC TAGCTTTCTTGATTCAATTTTCCATAGGAAGTAGGAAGGATCTTCTTTGCAGTCAGATGTTTTAACTTGTATGTTTGTTC ATATGATGTTCCCAAGCAATATATGCTGCTATGTTGAAGTATGATGAATGTCTCAGCAATTGAACTCAACAGGGCTGGAC AATAATTTATTGTCTATAGTTGCTGTTAGTCTCTTTGGTTCATGTCATTCTAGCAATTTGTCTACGTTCCCGTTATGGGG GCATGCAGATTCATTAGGAATTTTCTGAGAACACATTAGTCTATGCCCTTCTTAGTTTTGTATTTTAATTTTTAATTTAT TTTGCTTCTCATCTTAACTCTTTGCCTCCTTTGAGATTTTTTTTGTTAATTGGTTCTTAGCTTCTGTTTTGTTGCCAAAC TTTACAGATATGCCATGACTGGCCAGTTGACACAAAAAAGTGATGTCTACAGTTTTGGTGTTGTTCTTCTTGAGCTTCTT ACAGGAAGAAAACCTGTTGATCACACCATGCCCCGAGGACAGCAAAGTCTTGTCACATGGGTCAGTTTACCTGCTTAAAC TCACACCTCATCTGTGCTTCATTTCAATTATTTATAACAATGGTGGTCTTTCATAGATATTTTATTGAGAGTTGTTTCTG TACAGGCTACCCCACGATTGAGTGAGGATAAAGTGAAACAATGCGTGGACCCAAAACTGAAGGGTGAATATCCCCCAAAA GGAGTTGCTAAGGTATCTTTTCTTCTTTCTCTTCCCCCCTGCATGAATAAAGCCATGGTGCTTGAGTCTTTCATTTTGAA GTTGATGCTAACAGTGTATATTGTTGACCATGCAGCTGGCAGCTGTTGCAGCACTGTGTGTGCAGTATGAAGCTGAGTTT AGGCCAAATATGAGCATTGTTGTTAAAGCACTGCAACCACTTCTGAAGACCCCCGCTGCTGCTGCTGCTCCTGCACCAGA AAGTTGA
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0362800.11) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTCTCAAGATTGAAGAATGACAATTTTGTTGAGTTGCACGGTTATTGTGTTGAAGGAAATCTTCGAGTTCTTGCATA TGAGTTTGCTACTATGGGCTCTCTTCATGACATATTGCATGGTAGAAAGGGAGTTCAAGGGGCACAGCCAGGTCCAACTC TTGATTGGATACAGCGTGTTAGAATTGCAGTTGACGCTGCAAGGGGACTAGAATATTTGCACGAGAAAGTTCAACCGGCT ATTATTCACAGAGATATCAGATCAAGTAACGTGCTTATCTTTGAAGATTACAAGGCTAAGATAGCTGATTTCAACCTTTC TAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCTACTCGAGTGTTGGGAACTTTTGGGTATCATGCTCCAGAATATG CCATGACTGGCCAGTTGACACAAAAAAGTGATGTCTACAGTTTTGGTGTTGTTCTTCTTGAGCTTCTTACAGGAAGAAAA CCTGTTGATCACACCATGCCCCGAGGACAGCAAAGTCTTGTCACATGGGCTACCCCACGATTGAGTGAGGATAAAGTGAA ACAATGCGTGGACCCAAAACTGAAGGGTGAATATCCCCCAAAAGGAGTTGCTAAGCTGGCAGCTGTTGCAGCACTGTGTG TGCAGTATGAAGCTGAGTTTAGGCCAAATATGAGCATTGTTGTTAAAGCACTGCAACCACTTCTGAAGACCCCCGCTGCT GCTGCTGCTCCTGCACCAGAAAGTTGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0362800.11) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVSRLKNDNFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPA IIHRDIRSSNVLIFEDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRK PVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKTPAA AAAPAPES
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF000654
1 242 242 6.4E-26 –
ProSiteProfiles
PS50011
1 235 235 29.842
IPR000719
SMART
SM00219
1 231 231 1.0E-11
IPR020635
PANTHER
PTHR27001
2 239 238 1.7E-115 –
PANTHER
PTHR27001:SF804
2 239 238 1.7E-115 –
Pfam
PF07714
2 231 230 1.1E-35
IPR001245
SUPERFAMILY
SSF56112
2 235 234 8.09E-58
IPR011009
Gene3D
G3DSA:1.10.510.10
31 243 213 2.1E-60 –
ProSitePatterns
PS00109
81 93 13 -
IPR008266

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004713
Molecular function Protein tyrosine kinase activity Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0362800.11, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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