Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi5g1v0362800 |
Transcript ID | LotjaGi5g1v0362800.12 |
Related isoforms 11 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Protein kinase-like protein; TAIR: AT3G59350.6 Protein kinase superfamily protein; Swiss-Prot: sp|B9DFG5|PTI13_ARATH PTI1-like tyrosine-protein kinase 3; TrEMBL-Plants: tr|C6ZRT7|C6ZRT7_SOYBN Serine/threonine protein kinase; Found in the gene: LotjaGi5g1v0362800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67709404..67712475) extracted from Lotus japonicus Gifu genome v1.2.
ATAGGCAACTCAAAAGGCTCAAAGGCTTCAGCTCCTGTCAAGCATGAAACACAAAAAGCACCACCACCTATCGAAGTTCC TGCATTATCCTTAGATGAGCTCAAGGAGAAGACTGACAACTTTGGATCAAAGGCATTGATTGGTGAAGGATCATATGGAA GGGTGTATTACGCAACCTTAAATGATGGAAACGCTGTGGCTGTGAAGAAGCTTGATGTTTCTTCTGAACCCGAAACAAAT AATGAATTTTTGACTCAGGCATGTCGCTGCTATCAACTAAACAAACTATTCGAAATTATACACTGGAAATATGTTGGTTT CTGTATGGTTATTGTCTGGATATTAGCCTTCTCATTAAATTTTCCTACTTCAGGTTTCCATGGTCTCAAGATTGAAGAAT GACAATTTTGTTGAGTTGCACGGTTATTGTGTTGAAGGAAATCTTCGAGTTCTTGCATATGAGTTTGCTACTATGGGCTC TCTTCATGACATATTGCATGGTATTTAGCTTCATATCCCGTCCTAACTTATGTTTCATATCTTAAGAAGTTCATCTGATG ATTTTTGTTGTCTTTCCATTACAGGTAGAAAGGGAGTTCAAGGGGCACAGCCAGGTCCAACTCTTGATTGGATACAGCGT GTTAGAATTGCAGTTGACGCTGCAAGGGGACTAGAATATTTGCACGAGAAAGTTCAACCGGCTATTATTCACAGAGATAT CAGATCAAGTAACGTGCTTATCTTTGAAGATTACAAGGCTAAGATAGCTGATTTCAACCTTTCTAATCAGGCCCCTGACA TGGCTGCACGCCTTCATTCTACTCGAGTGTTGGGAACTTTTGGGTATCATGCTCCAGAGTAAGCTTCCTGGACCTGCTTA CTTATAATTTATTTATCTATATTATCCTCGTTGCCATACATAGATCTGTGTGTCTGCTATCTTTTATTTATGAAGAAAGA TTGTTTTTAGTGCTGCCTGAGTTATCTTTTTACATACCAGTGTTGTCAATCCGGGAATGTGGCCCACCCCATAGTGGTAT AGCGTATAGCGGGATGGCCGCTACATTGTTTTTTTTATATAATTTATACTATCTGCATATAAATGATAAAAGTACTCAAA ATTAATGACATTCATAATTAATAATAAAATTCATGAGATTTTTACTCTTTTAAACAAAGTATACCAGTGAAACAATGAAA GATAAAATAAATGAATAGAAACAAAACAGAGGAAGCTGTTGGGAAAGATAAATACAAAACCATGAAATAAGAGAAAGGGG AGATGGAGGACGAAGGGAGATGAGTGTGGCCGGAGCCTGGCCGCAAGTTGCGGGAGTGAGGAAGAAGATAGATCGAAGGT TTGGAGGTTAGGCAGAAGGGAGAAGAAGCGGGAGAGTGTATACCCAATTTTTCAGAACTGAACCCCATTTTACTCTTAAA GTTATAACCTAATGGCGTCTTTTTAAGGGTAAAATAGGGATTAAAACCCTAAAAACTGTTGCGCAGCTATAGCGCCTGCG GCACTCGATTCAGGCTGCGATGCTGAAGCGCTACAGCACTCCACTACAGCACTCCTGTCGCTGACGGCGGCCGCTTCGCT GTTATAGAGCTCTATTGATGTCCCTGTTACACACTGACACCGCTGCAATTCATGATTTATTGCTGAGGACTATAAATTAA TATTTGACCTCGAATAATTTATATTCTGGTCTTCTTGTCATCTGATTCATTTTTGATTTTCAGATGTCTTTAATGGATAG CTGCTGTGTCCATGTTTCCTTTTCCAGTTCTCTTTGATTTAATACATGTAAATTCAATTCAAATGTGAAATCTTTTAGTT ATACTTGATGATAAGTAGTAACTCTTGACTGGTAAATTCAATTCAAATGTGAAATCTTTTAGTTATACTTGATGATAAGT AGTAACTCTTGACTGGTAAGTTATGGTCCATAGACGCATATGATACTACTCGTGGTAGTATCATTACTGGCTTCTGATGT GGTTGTGGTCTTGCTATTTTTTCCACGTAGTCCCCAATGATTGGCTTGAACTTTACTGTTAGTGAATTTGATGAACAAGA AATACAGTACAGACCCTCTTATATCTAGCTTTCTTGATTCAATTTTCCATAGGAAGTAGGAAGGATCTTCTTTGCAGTCA GATGTTTTAACTTGTATGTTTGTTCATATGATGTTCCCAAGCAATATATGCTGCTATGTTGAAGTATGATGAATGTCTCA GCAATTGAACTCAACAGGGCTGGACAATAATTTATTGTCTATAGTTGCTGTTAGTCTCTTTGGTTCATGTCATTCTAGCA ATTTGTCTACGTTCCCGTTATGGGGGCATGCAGATTCATTAGGAATTTTCTGAGAACACATTAGTCTATGCCCTTCTTAG TTTTGTATTTTAATTTTTAATTTATTTTGCTTCTCATCTTAACTCTTTGCCTCCTTTGAGATTTTTTTTGTTAATTGGTT CTTAGCTTCTGTTTTGTTGCCAAACTTTACAGATATGCCATGACTGGCCAGTTGACACAAAAAAGTGATGTCTACAGTTT TGGTGTTGTTCTTCTTGAGCTTCTTACAGGAAGAAAACCTGTTGATCACACCATGCCCCGAGGACAGCAAAGTCTTGTCA CATGGGTCAGTTTACCTGCTTAAACTCACACCTCATCTGTGCTTCATTTCAATTATTTATAACAATGGTGGTCTTTCATA GATATTTTATTGAGAGTTGTTTCTGTACAGGCTACCCCACGATTGAGTGAGGATAAAGTGAAACAATGCGTGGACCCAAA ACTGAAGGGTGAATATCCCCCAAAAGGAGTTGCTAAGGTATCTTTTCTTCTTTCTCTTCCCCCCTGCATGAATAAAGCCA TGGTGCTTGAGTCTTTCATTTTGAAGTTGATGCTAACAGTGTATATTGTTGACCATGCAGCTGGCAGCTGTTGCAGCACT GTGTGTGCAGTATGAAGCTGAGTTTAGGCCAAATATGAGCATTGTTGTTAAAGCACTGCAACCACTTCTGAAGACCCCCG CTGCTGCTGCTGCTCCTGCACCAGAAAGTTGA
CDS sequence (LotjaGi5g1v0362800.12) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCTCAAGATTGAAGAATGACAATTTTGTTGAGTTGCACGGTTATTGTGTTGAAGGAAATCTTCGAGTTCTTGCATA TGAGTTTGCTACTATGGGCTCTCTTCATGACATATTGCATGGTAGAAAGGGAGTTCAAGGGGCACAGCCAGGTCCAACTC TTGATTGGATACAGCGTGTTAGAATTGCAGTTGACGCTGCAAGGGGACTAGAATATTTGCACGAGAAAGTTCAACCGGCT ATTATTCACAGAGATATCAGATCAAGTAACGTGCTTATCTTTGAAGATTACAAGGCTAAGATAGCTGATTTCAACCTTTC TAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCTACTCGAGTGTTGGGAACTTTTGGGTATCATGCTCCAGAATATG CCATGACTGGCCAGTTGACACAAAAAAGTGATGTCTACAGTTTTGGTGTTGTTCTTCTTGAGCTTCTTACAGGAAGAAAA CCTGTTGATCACACCATGCCCCGAGGACAGCAAAGTCTTGTCACATGGGCTACCCCACGATTGAGTGAGGATAAAGTGAA ACAATGCGTGGACCCAAAACTGAAGGGTGAATATCCCCCAAAAGGAGTTGCTAAGCTGGCAGCTGTTGCAGCACTGTGTG TGCAGTATGAAGCTGAGTTTAGGCCAAATATGAGCATTGTTGTTAAAGCACTGCAACCACTTCTGAAGACCCCCGCTGCT GCTGCTGCTCCTGCACCAGAAAGTTGA
Protein sequence (LotjaGi5g1v0362800.12) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSRLKNDNFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPA IIHRDIRSSNVLIFEDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRK PVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKTPAA AAAPAPES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PIRSF | 1 | 242 | 242 | 6.4E-26 | – | |
ProSiteProfiles | 1 | 235 | 235 | 29.842 | ||
SMART | 1 | 231 | 231 | 1.0E-11 | ||
PANTHER | 2 | 239 | 238 | 1.7E-115 | – | |
PANTHER | 2 | 239 | 238 | 1.7E-115 | – | |
Pfam | 2 | 231 | 230 | 1.1E-35 | ||
SUPERFAMILY | 2 | 235 | 234 | 8.09E-58 | ||
Gene3D | 31 | 243 | 213 | 2.1E-60 | – | |
ProSitePatterns | 81 | 93 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | Protein tyrosine kinase activity | Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0362800.12, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…