Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0002200 |
| Transcript ID | LotjaGi6g1v0002200.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein family; TAIR: AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775, mitochondrial; TrEMBL-Plants: tr|A0A1J7GLU8|A0A1J7GLU8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0002200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:579982..589361) extracted from Lotus japonicus Gifu genome v1.2.
TCGCTAAGGAACACAACTCTAGAAGCTTTTGGGAGCAAGTTGATTGTGGATGCTGGACAAAAAAGGGGGATCTCGGGCTA CATTCCAAAAACATCAATTCAATATTTCAAGTTCATAGCACTTTCAGACTGTGAAGCAGAATGGAACAAGGGAACCAACC ACATCAAAGAAGAAGGTAAAAGCAATTCTCTTATGTACGAAGTTGCTTTTCTTTGTTGATGTCTCACACACACACACACA CACACACACACACACACACATAGCTAATCTCTCTGGTGCAGAGTTTTTGAGCATTAGATTCATCCTACAGTTCACAATCA TCAACCAGCTAAGGAAACCTTGCCTCACTCAGTGCACCGTTGGATGAATCTAACGATCAGAAACTGAAACCCAAAACCCC TTTCACGATTGTGGCGCCCTATAAGTATAAACCCAAACCCAAAACCCCTTTCTTTCTACATCAACATCTACATCTACATC TACATCTACATCTACATCTCTCTCGCAGCAACACTGCTTCTCTGGACTCAAAGCTCAAACTCGTTCTCATCTGCAATCTC ATTTCACTTCAGTACGTACGTCATTCAATCTCATCTATTTTGTCTTTTCTCCTTCAAACTTGTTTTCATGTTGAATTGAA TCTCTTGCACAATACAGAACACCAAACCAAAATGCTTCTAATCTGTTTCATTTCATACTAGCTTTTTGTATTCAATCTCC TGTCTAATTTTACTGCTTTATTCATTCTTATAAATAGCTAGCTTAAGGGACACAAAGCTGGATTTAGTGAGTCTTCTTTT TCACATGTTATATGTAACAAGGAATGCAATCCCCAAACTTCCTCGCATTCTTATGCCGTCCTCTTCCTTCCTTCCATATG CTCAACAGACCAGCCACCGTCTTCATTCAAACTCCTCATTGCCACCGCAAAATTCCTACTATTGATGATGCTGTGGCTTT GTTTCGTCGCATGCTCCATATGCATCCCCCACCATCGGTTGTGGAATTCACCAAAATCCTAGGAGCAATTGTAAATATGA AAGACTATGCCATACCTATCTATCTTTATACTCAAATGGAATCTAGGGGCATCCTGCCATATACAGTTACTTTAAACATC TTGATGAATTGTTACTGCCATCTGGGTCAGCTGGGTTTTGCTTTCTCTGTACTGGGTAAGATTCTTAAGTTGGGTTACCA ACCAAGTGTTGTATCTTTGACTACACTAATGAAGGGCTTGTGCATTACTGGTAAGGTGTTGGATGCATGTACAATTCATG ACAATATAGTCTCAAAAGGGTTCCACTCAGATGAAGTTATGTATGGAACCTTAATGAGTGGTCTGTGTAAGAGTAAAGGA TCAGGAAATGCCATTGAAACACTTCAAGAATTGGAGGCCTTACAATTGGTTAAGCCGAATTTTGTAATCTACAATACAGT CATTCATGGTTTGTGCAAAGATGGACTTGTAAACAAGGCACAGAAATTGTGTTCTGAAATGATTCAACGGGGAATTTTCC CTGATGTTGTCACTTTTAGTTCGTTAATTTATGGCTTCTGTCATGCAGGTCAGTGGAAAGATGTCAGGTTATTGCTAAAT GAGAAGAGTCTAGATGTTTGTTCCTTCAACATAATAATGGATGCATTATGCAAACAAGGGCTGCTCTTAGAAGCCCATGC TGTTTGTTATGAGATGATTAAAAGAGGTGTTCAGCCTGATGTTATTTCTTACACTATTTTAATGGATGGCTATTGTTTAA AAAGTAAAGTGGACGAGGCAAGAAAATTATTTGATATGATGATTGAAGCGGGTTTGGTGCCTGATGTTTGGAGTTATAAC ATCCTGATTCAAGGCTACTGCAAGATTGAAAGAGTCGATGAAGCTATGAATCTATGTGAAGATATGCTCACTAAGAATTT AGTTCCAAACACTGTCACCTACAAATATCTGTTTGATGGCTTGTGCAGATTTGGGAGACTCCCTGATGCATGGAACTTTC TTACTCGAATGCATTATCGTGGCCATCGACCCCCTGATCTTACCCCTTACAATATCATATTAGAAACTTTATGCGAACAG CATCTGGATAAGGCAAACAAAATTTTTAATTCCCTCATCCCTGAACCTAATGTTCAGAGTTACAACATCTTGATTAGTGG TTATTGCAAGAATGGAAGAGTAGATGAAGCTATGAGTATTTATCAAAATATGTGTTTGAGGAATATAGTTCGAGATAGTG AAACCTTCAAGTTGTTGATAAATGCTTTCTGCAAACGGAAGCAATGTGACAAGGCAATTGCATTATATAAAAATAATCGT GACTTGTGCCCATTCAAAATACTTATGGATGGCTTGCGCAAAAATGGAATGGAGGAGGTAGCACAGAGGGTTTCCCAGCT TTATGGAGCCTGTGATCCAGATGTGGCATTAGTTCGGAATCAATTAGCTCTCTAAAGATGATTTGGCAGAATCCAGAATG ACCTTGCGTTGCTCTGTGAAGATAATTTCACCATTTTCTCGTCCTCCCTGTTTTCTCCCACCGTGTCCCTCCATCCAATT TGAAGTTCAGGTGATATTTATTGCTCACTTGAAGCTTAAAGTATATACAGCTGTTATTATAAATTTCGCTTGCCTTCTAT TACAATTGCTATTTGCTATCAAGTTTTCTTAGACTTGAATTTAACTTAACGCCCATGTTTCACCTTGGTAGTTGCTATTT CACTTTTCCTACATCATTTGTATTTTATATGTATGTATATTCTGGTAAAATGAAGAAGTTAAAAGAAGCAGCAATATTTC AACTTCACATCTAATGGCAGGAGGTAAATAATACCGTGGGGCCAACAGCTCAAAGAGGAGTTGCTCTGTTATTTTCTGCT CCTGCGCTTGCATTTTCAAGGTGGTGTCAAAGGAAACCACAAGAACTTCCCCTGATGTGCTGGTGAGCCTTGTCAAATTT TTACTTTGTTTGAACTCGGTATTTAGATGGAATTTGATTTTCTTACATCTATTTCCAGGTGATAAGGGTCTTAAGAGGTT CAACCTGATGTTATTTCACTATTTTAATGAATGGATATTGTTTAAAAAGTAAAGTGGATGAGGCAAGAAAATTATTTTTA AGGGAAACTGGAATGCCAAAGGCTGCACAGTTGCTGGGTCATCTCCATTTTTTCCTCCTCCCCCTTTTTTCCCTCATCAC TTCCCTCCATCCAATCTGAACTCCAGGTAATATTTATGAGAAATAATTTTTAGTACGGAAAAAAATGTTAATAATTATGT AAACCTTTGTTTTTTTTTCCTTTCAAAATTTGCAACTTTTAATCAATTTAGCTTTCCATTTTTTTTTCTGTCTAATGCAA TTCTTGTGATTCTTCTAAAATCCCTTCGTCATATATAGCACTCCTCAATATTTATTGGTCACTTGAAGCTTAAAGTTTAT ACGACAATTTCTTAAAAGTTTCACTTGCCTTCTACTACAATTCCTATTTGTTGTCAACGTTATTTTCTAGTCTGGACTAT GGATTTTAACTGAAAGCACATGTTGAGCTTTTTTGTTGAATAATGGATGTGGCTTATATTGGCTACCATATTCCATGTTT TTCTTTTTCTAATTTCTTTTATTAAGTGGCTTTCATTTAGTTGTCAGGATCTGAATATGGTGCTTTCACTCAACATTTTA GGTGTACAGTCCTCTGCTAGAAAGTTGTTGATTTTCTTGCTGAGTTTTGAAGGCTAAATTCTTTATTGACCCATTTGGAA TACGAAAGTAAAGTCATGGGTCAGTTATATCATTGGTTCAGGATCTGCTTTTCCTACGTGGTGTACATTATTTTATATGT ATACAATTTAATATCTAATGGTAGGAGGTAAATAATACAACTGCGCCAACTACTCAAAGAGGAGCTTCTCTATTATTTGC TTCGCATGTACTTGCATTTTCAAGGTGGCGTCGTCAAAGGAAACCACAGGAATTTTCCTCTGATGTGCTGGTGAGCCTCG CCAAATAGCTACATTGTTTGAACTTGGTAATTAGTTGGGATTTGATTTCCTGACATCTATTTCCAGGTGATAAGGATCCT GAAGTAACATCCTGGTGAAGCTTAAGAGGTTCTTGCCATGAGAACTGCAAGTTTCAACAGATACCTTAAGCAATAAGAAT ATTCTTGGAAAGGGAGGGTACAAAAGGTGCTTTGCAGAAGGTTCATTGGTACTATAATGGAAATGTTGCCCCATGCTCAA GAGGTAGATCTTTTGCAATTTTCTCCCTTTTGTCGTAGGGAAGACTGATAGAAACCAGAAAATTAGCAGTAGTTTATTGA TAGAACCCTAATTCCCAATTGGGGATTAGGGGAAAGATACATGAGAGAGATACCAAACACCCTCTCTAACCCTAGAAAGA GAACCACTTCTCTCTCTAAACCCAATTCCTAACTGAATACAAAGATACCCCTAATGTTCACTCACCTCTCTTATTTATAG GCAACATGCCTTATACCTGTCTAACTAACTTCCTAACAACTAACAATTCCTAACTAACCCTGCATTCCTATCAATACTCC CCCCCTGAAAATTCACCTTGTCCTCAAGGTGAAGACAAATGACAAGCTACATCATGGAACAACTATCTCAAGAATCCAAA TGGGACAAGCACAACTTCCACCTGGATCCCATTGCAGAAAGCAAATATTCCCAGCCACATAAGAATTGGATATCATCTTC ATAGGCCAACTCAAATAACTGTTGCCAAGGTTCCCATTCTGGAAAAACAATGTGGAAAAGACCAAGCGGTTGCCAACAGG TTGAAGAAGCAAGGTAGCAGAACCTTCAAAAACTAGCCTCCCCAAACTATATAACTCAGCACTTTGAGAACCCAAGCTGT AAAAACCAGCAGCTAACTCAGCTGAATCCAAGCCCATTTCATGCACAGCTCTAATTTCCACCTCTTGAGCCCACCTTCGA ACCTGGGCATGACCCATCTTTAGCATAGCATCACCCTCAACAGTAGTGAAAACCAGAATATAGGGATCTAATGAATGCCA AATTATCAAAGGTACTCTAGTGTGATCAAGGTGGCAAAGGAGCAATATGAAATTGGAAGATTGCTTGTTCCTGTCCTTCA TTTTAGTCACTGTCATTACTTTAGCCATGTCTTGGATACAAACAGCATAATCTCCCCAATTCCTTGCCATGTTGGCTGTG AAAATTGACTCATCATCATGGGTCCCTAGATTGCTGAATAGTTGATACTTGAACTCAGCAGGGAAATAACCACGAGGCTT ATAAACCTCATTATCAACTCTTTGGACCAAGAACTCAAGTTTACCCCAATATTCTATACTCCTCAAAATGACAATATAGA ACAAATCACTTAAATACTTGTTCTTAGCCCCCACTGTTCTTCGACTTCCTCCCCCCATTCTCATATTGTGTCCACCCGGA TCAATTAATAACCCCAAAATACTGTCTTGCTCCTGTCCAGTACCAAGATGGCCAAAACTGTGTTGCAACTCACAATCAAA GCTGAAGTATAATTTTGACACAGCAATCCCATCCTCTTCAATGTCTACACTTGTAGTCAGCAGCATAGTTCTCTGTAACT CTTTGAAATGAGTTCTGGTTCCCTGCTTCAAGTACATGGGCAAATTGGGTTTTGACCCAAAAGCTGATAAGTTGGCCCAA TCTATTCATTTGACTCCCCTATTCTGTTGTAAGGCCCAATTCCCCCTTTTAGTGTTTTGGGATTGTCCCATTCGCTTAGA AAAAATGTTCAACTCAGACCCAATCCTTGCTGGCCTCGTCTCTGTTTTGAGATCATTCCAGAAACTGTACCACTCACGCA TGGTTACAGTGATCAGTTTAGCTTGTCTCTTATCTTCCACTTTCCCTTTGTTCACCACACAAATAGTTGATTTCGATGAA TTTAGTGGCAGAAACTGTACCTGCATGCTTGCTGCCTTCATCTCCTTCGCTTGTGGAATTGCTCTCGTCGACACCTCTCT TGCCGTTTGCGAAGTAGCGAACTTTGCAGGAGTACTGTGCTCTGACGGATCCAATGATGGAGGCAGATCCTCCTTGCGAC ATTGGAGAAGACTCATCTTCAATCTGTCATCTCTCTTCAGTCTTCCCCATTGGTGCACGACTTGCGACGATAAACTCCGC CGACGTCGACGCCCCCGCCCACAAAGCCCCAATATTAGGCGGTTTCGCCGGTGGACGATTTATCATCTCCGGCATGCAAA CAAGCGTGTTTGGTGGTTTCACCAGCGAACGTTTTGTCTTCTCCGGCCCACCAACAAATGTGTGTGATCGCTTCCATGGT GGCTGCATGGTGGTTTCCGTCAAGGTGGCCTCCGCAGCAACTCGAAACATCGTGCCCAACACATCACCATTTTGGACATG CAGGATCTTGCCACTCTTCATCTCCAATTGCGGCATTGCTACCTCTGATGCAAGATTGAAGCCCTTCATCGCAAAAGTTA GGTTTTTCTCCACATCTGAAGCGAACTTTGATTCCTTTCGCATTGCCTCCGCCGCTACTCGATCTTCCTCCGCCGCTTCA ACATTGGGTTCCAGCGTCTCCTCAGAAGTCAAATCTTCCTCTACTTCTGATGGTTGCTCACCCACCATAGCGTATCTTTC TTCTTCCGCCATCGTCTTCGTTCCTCTCAACAACGTCGTCGCTGCCGCTGTTCGCCCCGCTTCGATTGCAGCCTCTGATT CTCTCTGCGCAGCCTCTGCTTCTCTCCTTTCTTGTTCCCTCTGTTTTCTCCTCTCTTCAAGATCTCGCAATTTGTTCTCC AATCTTGAGATTTCTTTCTCAAGATCAGGATTTGTAACTAGTCGCACCCCCATTTTCTTCGCCACCGCCGCTAGGTCGAA CTCGTTCTTCCCGGTGATAGCCTCCACTGACTCCATCCTCGCTCTCAATTCTTGGTTTTCCTGAACAACTTCTGAACTTG CCATTCTTCTCCTTTCCTCTTGCGCAGCCTAGGATTGTCGTGGTTCAGGCACCAGGATGGTGCTCTGATACCAATGATAG AAACCAGAAAATTAGCAGTAGTTTATTGATAGAACCCTAATTCCCAATTGGGGATTAGGGGAAAGATACATGAGAGAGAT ACCAAACACCCTCTCTAACCCTAGAAAGAGAACCACTTCTCTCTCTAAACCCAATTCCTAACTGAATACAAAGATACCCC TAATGTTCACTCACCTCTCTTATTTATAGGCAACATGCCTTATACCTGTCTAACTAACTTCCTAACAACTAACAATTCCT AACTAACCCTGCATTCCTATCAAAGACCCATAGCCCTGTAAACAACAACAATCATGTTTATAGCACCTAGTCTGATTCTT TGCTGTGGAATGACATTGATTTGGGTTTTTAAGGAGATGCATACCAGTTTATGTGTAGGTTAGGAAACTCGTTCGAAAAT CACGGTGAACTCTAAATCATGGTGGATATAAGCAATTTCCCTTAGGTTTTGCTCTTGTCCACGATAATTTTGTCCACCGC GAGTTTTCAAACATGCACATATCTCACATTTTTGGCTTCTCACTTTTTCTCCTTATTTTGCACCCGTTGTTGCTCCACTC AGTTGTTTATAGCCCACTAATATCATAGTGTTTCATTATTAGGGGTGTGCAAAACCCACTTATGAACGACAACCAAATCT TGAACCGAGCCAAATCAAACCATAACATAACCAAACTGGTAAAACATTTTAATACCTGAATATATTTTTGTTAAAATTTA GTTCAGTAATTCAAACTGCATATAACCAATTCAGTGAACTGCGTTACGCGTATACCCAAATTTCAAAACACAGAATCAAA ATTTATATATAGGAGCCCCAAATCAGTTCATTTCTTCCCGAAAGAAGTCATTGGAAGATATGATACACTTTTATCTTAGA TGTCAGGAAATTATATGATTCTACCAAAATGTCATCTTGTGTCACAACCATTTAAATTTGGCATGACTATGGCTATAGCT TTTGAAAATTTATAGTAGTGTCTTCCAGAAACATGTAGTGAATGAGCTTCAAATTTATAGATATTTCCTTCATTGTAACT TTCTATTTTACTTTTTAATGAGATAAAAAGGCTGTCGTGGCTAAATATCTATTGCAACAAATCAACCATTTTAAATCTTG CTGCCACTGGTTTTAAGATCCTCTGAGGTGCATGGTGCCATTTAAAAAGCAAAATGCAGCATTGATAACCATCGATTTAA AATGCATGGTCTGTAGGATTGTGTTGGGGATCGTTTCGGTGCAGCATTGCTTGCGGTTTAGAGGCTTGGATACGGAAGGT TTGTGTCCTCTCTGTGATTGTGAAGCTGAAACTATTGATCATGCTTTTTTGTCATGCAATCATGTTCAGATGCTTTTGAT TGGATCTCTACTTGGCTTACGGTACATGTCTTATTCTGCCACCTCTTTTATGCTTACTTACTGCATTTCATGGCAGATGC GGATGATGATGTTGCTTTATTCTTCAGTTTACTATATTGCATCTAGGAGCATTGAAACAATGTCATTTTTAAGGAGTTGC AGCTTGATGAGTCGCCGTCTCTTCAACGATCTTCACACTGCATGCTCTTCCTGATTTGTGTTTTGTTTCGTCCATGGCTG CCCCTTTGACGGTTACATGGCAGCAAACCAGCAACCTTCGGGTGGGAAAATCAAAATTAATTTTGATGTGTCAGTTGTTG AGCATTTGGTTGTGGGGTTTGGTCTCCTTGCCGGTGATCATGAGGGTGAGGTTCTCGCTGCAACTAGCGCTTTCCCCCTC TCGGTGTTGTCTCCTTTGATAGCCGAGGCGTTTTGTTGGGCTCTTTCTTCATATATGACTTCATGTTTTGGATCATTTTG CTTTGAGATAGGCTATTTACAGCTCTATGAGACTTGGATGAAGACTTAGCCCGGGTCTTCGTATGTTTGCACTTTAGTGA ATGATTGTCGTTTACTTGCTTGTTATTTTGATTTTATTGAACCCTCTTTTGTTTGTCCAAGCTGCAATAGTTCTGCGGTT TTTTTTTTTGTGTGGCTGATAAGACATTTTCTTTTCAGAACTTGGTTTGGATTGAGGAGGTCCGCCTTGATCCTCTTACT AGGCATGATGTATTAACCTCTAAACGTGTTTCTCCGATTTAATTAATGAAATTCAGTTAAAAATTAAAAAAAAGAAAAAT AGAAGTCAACGGTTATAGTTTACAATTTCTTGTGTACTCAGACTTTGCTCTTACGTAATACATCCCGCGATCCAAATCCC TACCATCAACATTCATTGCTTTACAATTTATGAAACACATTGTCAAACTAATGCGAATAAATATAATTATTTGTATTATT TTAATTATCCTATTCAAAAT
CDS sequence (LotjaGi6g1v0002200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAATCCCCAAACTTCCTCGCATTCTTATGCCGTCCTCTTCCTTCCTTCCATATGCTCAACAGACCAGCCACCGTCTT CATTCAAACTCCTCATTGCCACCGCAAAATTCCTACTATTGATGATGCTGTGGCTTTGTTTCGTCGCATGCTCCATATGC ATCCCCCACCATCGGTTGTGGAATTCACCAAAATCCTAGGAGCAATTGTAAATATGAAAGACTATGCCATACCTATCTAT CTTTATACTCAAATGGAATCTAGGGGCATCCTGCCATATACAGTTACTTTAAACATCTTGATGAATTGTTACTGCCATCT GGGTCAGCTGGGTTTTGCTTTCTCTGTACTGGGTAAGATTCTTAAGTTGGGTTACCAACCAAGTGTTGTATCTTTGACTA CACTAATGAAGGGCTTGTGCATTACTGGTAAGGTGTTGGATGCATGTACAATTCATGACAATATAGTCTCAAAAGGGTTC CACTCAGATGAAGTTATGTATGGAACCTTAATGAGTGGTCTGTGTAAGAGTAAAGGATCAGGAAATGCCATTGAAACACT TCAAGAATTGGAGGCCTTACAATTGGTTAAGCCGAATTTTGTAATCTACAATACAGTCATTCATGGTTTGTGCAAAGATG GACTTGTAAACAAGGCACAGAAATTGTGTTCTGAAATGATTCAACGGGGAATTTTCCCTGATGTTGTCACTTTTAGTTCG TTAATTTATGGCTTCTGTCATGCAGGTCAGTGGAAAGATGTCAGGTTATTGCTAAATGAGAAGAGTCTAGATGTTTGTTC CTTCAACATAATAATGGATGCATTATGCAAACAAGGGCTGCTCTTAGAAGCCCATGCTGTTTGTTATGAGATGATTAAAA GAGGTGTTCAGCCTGATGTTATTTCTTACACTATTTTAATGGATGGCTATTGTTTAAAAAGTAAAGTGGACGAGGCAAGA AAATTATTTGATATGATGATTGAAGCGGGTTTGGTGCCTGATGTTTGGAGTTATAACATCCTGATTCAAGGCTACTGCAA GATTGAAAGAGTCGATGAAGCTATGAATCTATGTGAAGATATGCTCACTAAGAATTTAGTTCCAAACACTGTCACCTACA AATATCTGTTTGATGGCTTGTGCAGATTTGGGAGACTCCCTGATGCATGGAACTTTCTTACTCGAATGCATTATCGTGGC CATCGACCCCCTGATCTTACCCCTTACAATATCATATTAGAAACTTTATGCGAACAGCATCTGGATAAGGCAAACAAAAT TTTTAATTCCCTCATCCCTGAACCTAATGTTCAGAGTTACAACATCTTGATTAGTGGTTATTGCAAGAATGGAAGAGTAG ATGAAGCTATGAGTATTTATCAAAATATGTGTTTGAGGAATATAGTTCGAGATAGTGAAACCTTCAAGTTGTTGATAAAT GCTTTCTGCAAACGGAAGCAATGTGACAAGGCAATTGCATTATATAAAAATAATCGTGACTTGTGCCCATTCAAAATACT TATGGATGGCTTGCGCAAAAATGGAATGGAGGAGGTAGCACAGAGGGTTTCCCAGCTTTATGGAGCCTGTGATCCAGATG TGGCATTAGTTCGGAATCAATTAGCTCTCTAA
Protein sequence (LotjaGi6g1v0002200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQSPNFLAFLCRPLPSFHMLNRPATVFIQTPHCHRKIPTIDDAVALFRRMLHMHPPPSVVEFTKILGAIVNMKDYAIPIY LYTQMESRGILPYTVTLNILMNCYCHLGQLGFAFSVLGKILKLGYQPSVVSLTTLMKGLCITGKVLDACTIHDNIVSKGF HSDEVMYGTLMSGLCKSKGSGNAIETLQELEALQLVKPNFVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSS LIYGFCHAGQWKDVRLLLNEKSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKSKVDEAR KLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNTVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG HRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN AFCKRKQCDKAIALYKNNRDLCPFKILMDGLRKNGMEEVAQRVSQLYGACDPDVALVRNQLAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 24 | 145 | 122 | 5.1E-19 | ||
| PANTHER | 40 | 254 | 215 | 1.1E-102 | – | |
| ProSiteProfiles | 58 | 92 | 35 | 6.993 | ||
| ProSiteProfiles | 93 | 127 | 35 | 9.613 | ||
| Pfam | 94 | 140 | 47 | 1.5E-8 | ||
| TIGRFAM | 95 | 128 | 34 | 2.7E-5 | ||
| ProSiteProfiles | 128 | 162 | 35 | 8.331 | ||
| Gene3D | 146 | 261 | 116 | 2.5E-29 | ||
| ProSiteProfiles | 163 | 197 | 35 | 7.914 | ||
| Pfam | 165 | 191 | 27 | 0.46 | ||
| Pfam | 198 | 247 | 50 | 3.1E-17 | ||
| ProSiteProfiles | 199 | 233 | 35 | 12.342 | ||
| TIGRFAM | 201 | 235 | 35 | 2.5E-8 | ||
| ProSiteProfiles | 234 | 260 | 27 | 6.884 | ||
| TIGRFAM | 236 | 260 | 25 | 0.0028 | ||
| Gene3D | 262 | 328 | 67 | 5.9E-19 | ||
| PANTHER | 263 | 401 | 139 | 1.1E-102 | – | |
| ProSiteProfiles | 264 | 298 | 35 | 11.696 | ||
| Pfam | 264 | 311 | 48 | 9.2E-15 | ||
| TIGRFAM | 267 | 300 | 34 | 1.9E-8 | ||
| ProSiteProfiles | 299 | 333 | 35 | 13.088 | ||
| TIGRFAM | 301 | 335 | 35 | 2.3E-10 | ||
| SUPERFAMILY | 303 | 504 | 202 | 4.18E-7 | – | |
| Gene3D | 329 | 419 | 91 | 1.5E-24 | ||
| Pfam | 333 | 382 | 50 | 9.5E-17 | ||
| ProSiteProfiles | 334 | 368 | 35 | 12.627 | ||
| TIGRFAM | 337 | 370 | 34 | 2.3E-8 | ||
| ProSiteProfiles | 369 | 403 | 35 | 11.082 | ||
| PANTHER | 395 | 523 | 129 | 1.1E-102 | – | |
| Gene3D | 420 | 531 | 112 | 2.9E-24 | ||
| Pfam | 435 | 484 | 50 | 6.5E-15 | ||
| ProSiteProfiles | 436 | 470 | 35 | 12.529 | ||
| TIGRFAM | 439 | 471 | 33 | 8.5E-11 | ||
| ProSiteProfiles | 471 | 501 | 31 | 7.75 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0002200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…