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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0002200 |
| Transcript ID | LotjaGi6g1v0002200.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein family; TAIR: AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775, mitochondrial; TrEMBL-Plants: tr|A0A1J7GLU8|A0A1J7GLU8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0002200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:580048..589342) extracted from Lotus japonicus Gifu genome v1.2.
GGGATCTCGGGCTACATTCCAAAAACATCAATTCAATATTTCAAGTTCATAGCACTTTCAGACTGTGAAGCAGAATGGAA CAAGGGAACCAACCACATCAAAGAAGAAGGTAAAAGCAATTCTCTTATGTACGAAGTTGCTTTTCTTTGTTGATGTCTCA CACACACACACACACACACACACACACACACACATAGCTAATCTCTCTGGTGCAGAGTTTTTGAGCATTAGATTCATCCT ACAGTTCACAATCATCAACCAGCTAAGGAAACCTTGCCTCACTCAGTGCACCGTTGGATGAATCTAACGATCAGAAACTG AAACCCAAAACCCCTTTCACGATTGTGGCGCCCTATAAGTATAAACCCAAACCCAAAACCCCTTTCTTTCTACATCAACA TCTACATCTACATCTACATCTACATCTACATCTCTCTCGCAGCAACACTGCTTCTCTGGACTCAAAGCTCAAACTCGTTC TCATCTGCAATCTCATTTCACTTCAGTACGTACGTCATTCAATCTCATCTATTTTGTCTTTTCTCCTTCAAACTTGTTTT CATGTTGAATTGAATCTCTTGCACAATACAGAACACCAAACCAAAATGCTTCTAATCTGTTTCATTTCATACTAGCTTTT TGTATTCAATCTCCTGTCTAATTTTACTGCTTTATTCATTCTTATAAATAGCTAGCTTAAGGGACACAAAGCTGGATTTA GTGAGTCTTCTTTTTCACATGTTATATGTAACAAGGAATGCAATCCCCAAACTTCCTCGCATTCTTATGCCGTCCTCTTC CTTCCTTCCATATGCTCAACAGACCAGCCACCGTCTTCATTCAAACTCCTCATTGCCACCGCAAAATTCCTACTATTGAT GATGCTGTGGCTTTGTTTCGTCGCATGCTCCATATGCATCCCCCACCATCGGTTGTGGAATTCACCAAAATCCTAGGAGC AATTGTAAATATGAAAGACTATGCCATACCTATCTATCTTTATACTCAAATGGAATCTAGGGGCATCCTGCCATATACAG TTACTTTAAACATCTTGATGAATTGTTACTGCCATCTGGGTCAGCTGGGTTTTGCTTTCTCTGTACTGGGTAAGATTCTT AAGTTGGGTTACCAACCAAGTGTTGTATCTTTGACTACACTAATGAAGGGCTTGTGCATTACTGGTAAGGTGTTGGATGC ATGTACAATTCATGACAATATAGTCTCAAAAGGGTTCCACTCAGATGAAGTTATGTATGGAACCTTAATGAGTGGTCTGT GTAAGAGTAAAGGATCAGGAAATGCCATTGAAACACTTCAAGAATTGGAGGCCTTACAATTGGTTAAGCCGAATTTTGTA ATCTACAATACAGTCATTCATGGTTTGTGCAAAGATGGACTTGTAAACAAGGCACAGAAATTGTGTTCTGAAATGATTCA ACGGGGAATTTTCCCTGATGTTGTCACTTTTAGTTCGTTAATTTATGGCTTCTGTCATGCAGGTCAGTGGAAAGATGTCA GGTTATTGCTAAATGAGAAGAGTCTAGATGTTTGTTCCTTCAACATAATAATGGATGCATTATGCAAACAAGGGCTGCTC TTAGAAGCCCATGCTGTTTGTTATGAGATGATTAAAAGAGGTGTTCAGCCTGATGTTATTTCTTACACTATTTTAATGGA TGGCTATTGTTTAAAAAGTAAAGTGGACGAGGCAAGAAAATTATTTGATATGATGATTGAAGCGGGTTTGGTGCCTGATG TTTGGAGTTATAACATCCTGATTCAAGGCTACTGCAAGATTGAAAGAGTCGATGAAGCTATGAATCTATGTGAAGATATG CTCACTAAGAATTTAGTTCCAAACACTGTCACCTACAAATATCTGTTTGATGGCTTGTGCAGATTTGGGAGACTCCCTGA TGCATGGAACTTTCTTACTCGAATGCATTATCGTGGCCATCGACCCCCTGATCTTACCCCTTACAATATCATATTAGAAA CTTTATGCGAACAGCATCTGGATAAGGCAAACAAAATTTTTAATTCCCTCATCCCTGAACCTAATGTTCAGAGTTACAAC ATCTTGATTAGTGGTTATTGCAAGAATGGAAGAGTAGATGAAGCTATGAGTATTTATCAAAATATGTGTTTGAGGAATAT AGTTCGAGATAGTGAAACCTTCAAGTTGTTGATAAATGCTTTCTGCAAACGGAAGCAATGTGACAAGGCAATTGCATTAT ATAAAAATAATCGTGACTTGTGCCCATTCAAAATACTTATGGATGGCTTGCGCAAAAATGGAATGGAGGAGGTAGCACAG AGGGTTTCCCAGCTTTATGGAGCCTGTGATCCAGATGTGGCATTAGTTCGGAATCAATTAGCTCTCTAAAGATGATTTGG CAGAATCCAGAATGACCTTGCGTTGCTCTGTGAAGATAATTTCACCATTTTCTCGTCCTCCCTGTTTTCTCCCACCGTGT CCCTCCATCCAATTTGAAGTTCAGGTGATATTTATTGCTCACTTGAAGCTTAAAGTATATACAGCTGTTATTATAAATTT CGCTTGCCTTCTATTACAATTGCTATTTGCTATCAAGTTTTCTTAGACTTGAATTTAACTTAACGCCCATGTTTCACCTT GGTAGTTGCTATTTCACTTTTCCTACATCATTTGTATTTTATATGTATGTATATTCTGGTAAAATGAAGAAGTTAAAAGA AGCAGCAATATTTCAACTTCACATCTAATGGCAGGAGGTAAATAATACCGTGGGGCCAACAGCTCAAAGAGGAGTTGCTC TGTTATTTTCTGCTCCTGCGCTTGCATTTTCAAGGTGGTGTCAAAGGAAACCACAAGAACTTCCCCTGATGTGCTGGTGA GCCTTGTCAAATTTTTACTTTGTTTGAACTCGGTATTTAGATGGAATTTGATTTTCTTACATCTATTTCCAGGTGATAAG GGTCTTAAGAGGTTCAACCTGATGTTATTTCACTATTTTAATGAATGGATATTGTTTAAAAAGTAAAGTGGATGAGGCAA GAAAATTATTTTTAAGGGAAACTGGAATGCCAAAGGCTGCACAGTTGCTGGGTCATCTCCATTTTTTCCTCCTCCCCCTT TTTTCCCTCATCACTTCCCTCCATCCAATCTGAACTCCAGGTAATATTTATGAGAAATAATTTTTAGTACGGAAAAAAAT GTTAATAATTATGTAAACCTTTGTTTTTTTTTCCTTTCAAAATTTGCAACTTTTAATCAATTTAGCTTTCCATTTTTTTT TCTGTCTAATGCAATTCTTGTGATTCTTCTAAAATCCCTTCGTCATATATAGCACTCCTCAATATTTATTGGTCACTTGA AGCTTAAAGTTTATACGACAATTTCTTAAAAGTTTCACTTGCCTTCTACTACAATTCCTATTTGTTGTCAACGTTATTTT CTAGTCTGGACTATGGATTTTAACTGAAAGCACATGTTGAGCTTTTTTGTTGAATAATGGATGTGGCTTATATTGGCTAC CATATTCCATGTTTTTCTTTTTCTAATTTCTTTTATTAAGTGGCTTTCATTTAGTTGTCAGGATCTGAATATGGTGCTTT CACTCAACATTTTAGGTGTACAGTCCTCTGCTAGAAAGTTGTTGATTTTCTTGCTGAGTTTTGAAGGCTAAATTCTTTAT TGACCCATTTGGAATACGAAAGTAAAGTCATGGGTCAGTTATATCATTGGTTCAGGATCTGCTTTTCCTACGTGGTGTAC ATTATTTTATATGTATACAATTTAATATCTAATGGTAGGAGGTAAATAATACAACTGCGCCAACTACTCAAAGAGGAGCT TCTCTATTATTTGCTTCGCATGTACTTGCATTTTCAAGGTGGCGTCGTCAAAGGAAACCACAGGAATTTTCCTCTGATGT GCTGGTGAGCCTCGCCAAATAGCTACATTGTTTGAACTTGGTAATTAGTTGGGATTTGATTTCCTGACATCTATTTCCAG GTGATAAGGATCCTGAAGTAACATCCTGGTGAAGCTTAAGAGGTTCTTGCCATGAGAACTGCAAGTTTCAACAGATACCT TAAGCAATAAGAATATTCTTGGAAAGGGAGGGTACAAAAGGTGCTTTGCAGAAGGTTCATTGGTACTATAATGGAAATGT TGCCCCATGCTCAAGAGGTAGATCTTTTGCAATTTTCTCCCTTTTGTCGTAGGGAAGACTGATAGAAACCAGAAAATTAG CAGTAGTTTATTGATAGAACCCTAATTCCCAATTGGGGATTAGGGGAAAGATACATGAGAGAGATACCAAACACCCTCTC TAACCCTAGAAAGAGAACCACTTCTCTCTCTAAACCCAATTCCTAACTGAATACAAAGATACCCCTAATGTTCACTCACC TCTCTTATTTATAGGCAACATGCCTTATACCTGTCTAACTAACTTCCTAACAACTAACAATTCCTAACTAACCCTGCATT CCTATCAATACTCCCCCCCTGAAAATTCACCTTGTCCTCAAGGTGAAGACAAATGACAAGCTACATCATGGAACAACTAT CTCAAGAATCCAAATGGGACAAGCACAACTTCCACCTGGATCCCATTGCAGAAAGCAAATATTCCCAGCCACATAAGAAT TGGATATCATCTTCATAGGCCAACTCAAATAACTGTTGCCAAGGTTCCCATTCTGGAAAAACAATGTGGAAAAGACCAAG CGGTTGCCAACAGGTTGAAGAAGCAAGGTAGCAGAACCTTCAAAAACTAGCCTCCCCAAACTATATAACTCAGCACTTTG AGAACCCAAGCTGTAAAAACCAGCAGCTAACTCAGCTGAATCCAAGCCCATTTCATGCACAGCTCTAATTTCCACCTCTT GAGCCCACCTTCGAACCTGGGCATGACCCATCTTTAGCATAGCATCACCCTCAACAGTAGTGAAAACCAGAATATAGGGA TCTAATGAATGCCAAATTATCAAAGGTACTCTAGTGTGATCAAGGTGGCAAAGGAGCAATATGAAATTGGAAGATTGCTT GTTCCTGTCCTTCATTTTAGTCACTGTCATTACTTTAGCCATGTCTTGGATACAAACAGCATAATCTCCCCAATTCCTTG CCATGTTGGCTGTGAAAATTGACTCATCATCATGGGTCCCTAGATTGCTGAATAGTTGATACTTGAACTCAGCAGGGAAA TAACCACGAGGCTTATAAACCTCATTATCAACTCTTTGGACCAAGAACTCAAGTTTACCCCAATATTCTATACTCCTCAA AATGACAATATAGAACAAATCACTTAAATACTTGTTCTTAGCCCCCACTGTTCTTCGACTTCCTCCCCCCATTCTCATAT TGTGTCCACCCGGATCAATTAATAACCCCAAAATACTGTCTTGCTCCTGTCCAGTACCAAGATGGCCAAAACTGTGTTGC AACTCACAATCAAAGCTGAAGTATAATTTTGACACAGCAATCCCATCCTCTTCAATGTCTACACTTGTAGTCAGCAGCAT AGTTCTCTGTAACTCTTTGAAATGAGTTCTGGTTCCCTGCTTCAAGTACATGGGCAAATTGGGTTTTGACCCAAAAGCTG ATAAGTTGGCCCAATCTATTCATTTGACTCCCCTATTCTGTTGTAAGGCCCAATTCCCCCTTTTAGTGTTTTGGGATTGT CCCATTCGCTTAGAAAAAATGTTCAACTCAGACCCAATCCTTGCTGGCCTCGTCTCTGTTTTGAGATCATTCCAGAAACT GTACCACTCACGCATGGTTACAGTGATCAGTTTAGCTTGTCTCTTATCTTCCACTTTCCCTTTGTTCACCACACAAATAG TTGATTTCGATGAATTTAGTGGCAGAAACTGTACCTGCATGCTTGCTGCCTTCATCTCCTTCGCTTGTGGAATTGCTCTC GTCGACACCTCTCTTGCCGTTTGCGAAGTAGCGAACTTTGCAGGAGTACTGTGCTCTGACGGATCCAATGATGGAGGCAG ATCCTCCTTGCGACATTGGAGAAGACTCATCTTCAATCTGTCATCTCTCTTCAGTCTTCCCCATTGGTGCACGACTTGCG ACGATAAACTCCGCCGACGTCGACGCCCCCGCCCACAAAGCCCCAATATTAGGCGGTTTCGCCGGTGGACGATTTATCAT CTCCGGCATGCAAACAAGCGTGTTTGGTGGTTTCACCAGCGAACGTTTTGTCTTCTCCGGCCCACCAACAAATGTGTGTG ATCGCTTCCATGGTGGCTGCATGGTGGTTTCCGTCAAGGTGGCCTCCGCAGCAACTCGAAACATCGTGCCCAACACATCA CCATTTTGGACATGCAGGATCTTGCCACTCTTCATCTCCAATTGCGGCATTGCTACCTCTGATGCAAGATTGAAGCCCTT CATCGCAAAAGTTAGGTTTTTCTCCACATCTGAAGCGAACTTTGATTCCTTTCGCATTGCCTCCGCCGCTACTCGATCTT CCTCCGCCGCTTCAACATTGGGTTCCAGCGTCTCCTCAGAAGTCAAATCTTCCTCTACTTCTGATGGTTGCTCACCCACC ATAGCGTATCTTTCTTCTTCCGCCATCGTCTTCGTTCCTCTCAACAACGTCGTCGCTGCCGCTGTTCGCCCCGCTTCGAT TGCAGCCTCTGATTCTCTCTGCGCAGCCTCTGCTTCTCTCCTTTCTTGTTCCCTCTGTTTTCTCCTCTCTTCAAGATCTC GCAATTTGTTCTCCAATCTTGAGATTTCTTTCTCAAGATCAGGATTTGTAACTAGTCGCACCCCCATTTTCTTCGCCACC GCCGCTAGGTCGAACTCGTTCTTCCCGGTGATAGCCTCCACTGACTCCATCCTCGCTCTCAATTCTTGGTTTTCCTGAAC AACTTCTGAACTTGCCATTCTTCTCCTTTCCTCTTGCGCAGCCTAGGATTGTCGTGGTTCAGGCACCAGGATGGTGCTCT GATACCAATGATAGAAACCAGAAAATTAGCAGTAGTTTATTGATAGAACCCTAATTCCCAATTGGGGATTAGGGGAAAGA TACATGAGAGAGATACCAAACACCCTCTCTAACCCTAGAAAGAGAACCACTTCTCTCTCTAAACCCAATTCCTAACTGAA TACAAAGATACCCCTAATGTTCACTCACCTCTCTTATTTATAGGCAACATGCCTTATACCTGTCTAACTAACTTCCTAAC AACTAACAATTCCTAACTAACCCTGCATTCCTATCAAAGACCCATAGCCCTGTAAACAACAACAATCATGTTTATAGCAC CTAGTCTGATTCTTTGCTGTGGAATGACATTGATTTGGGTTTTTAAGGAGATGCATACCAGTTTATGTGTAGGTTAGGAA ACTCGTTCGAAAATCACGGTGAACTCTAAATCATGGTGGATATAAGCAATTTCCCTTAGGTTTTGCTCTTGTCCACGATA ATTTTGTCCACCGCGAGTTTTCAAACATGCACATATCTCACATTTTTGGCTTCTCACTTTTTCTCCTTATTTTGCACCCG TTGTTGCTCCACTCAGTTGTTTATAGCCCACTAATATCATAGTGTTTCATTATTAGGGGTGTGCAAAACCCACTTATGAA CGACAACCAAATCTTGAACCGAGCCAAATCAAACCATAACATAACCAAACTGGTAAAACATTTTAATACCTGAATATATT TTTGTTAAAATTTAGTTCAGTAATTCAAACTGCATATAACCAATTCAGTGAACTGCGTTACGCGTATACCCAAATTTCAA AACACAGAATCAAAATTTATATATAGGAGCCCCAAATCAGTTCATTTCTTCCCGAAAGAAGTCATTGGAAGATATGATAC ACTTTTATCTTAGATGTCAGGAAATTATATGATTCTACCAAAATGTCATCTTGTGTCACAACCATTTAAATTTGGCATGA CTATGGCTATAGCTTTTGAAAATTTATAGTAGTGTCTTCCAGAAACATGTAGTGAATGAGCTTCAAATTTATAGATATTT CCTTCATTGTAACTTTCTATTTTACTTTTTAATGAGATAAAAAGGCTGTCGTGGCTAAATATCTATTGCAACAAATCAAC CATTTTAAATCTTGCTGCCACTGGTTTTAAGATCCTCTGAGGTGCATGGTGCCATTTAAAAAGCAAAATGCAGCATTGAT AACCATCGATTTAAAATGCATGGTCTGTAGGATTGTGTTGGGGATCGTTTCGGTGCAGCATTGCTTGCGGTTTAGAGGCT TGGATACGGAAGGTTTGTGTCCTCTCTGTGATTGTGAAGCTGAAACTATTGATCATGCTTTTTTGTCATGCAATCATGTT CAGATGCTTTTGATTGGATCTCTACTTGGCTTACGGTACATGTCTTATTCTGCCACCTCTTTTATGCTTACTTACTGCAT TTCATGGCAGATGCGGATGATGATGTTGCTTTATTCTTCAGTTTACTATATTGCATCTAGGAGCATTGAAACAATGTCAT TTTTAAGGAGTTGCAGCTTGATGAGTCGCCGTCTCTTCAACGATCTTCACACTGCATGCTCTTCCTGATTTGTGTTTTGT TTCGTCCATGGCTGCCCCTTTGACGGTTACATGGCAGCAAACCAGCAACCTTCGGGTGGGAAAATCAAAATTAATTTTGA TGTGTCAGTTGTTGAGCATTTGGTTGTGGGGTTTGGTCTCCTTGCCGGTGATCATGAGGGTGAGGTTCTCGCTGCAACTA GCGCTTTCCCCCTCTCGGTGTTGTCTCCTTTGATAGCCGAGGCGTTTTGTTGGGCTCTTTCTTCATATATGACTTCATGT TTTGGATCATTTTGCTTTGAGATAGGCTATTTACAGCTCTATGAGACTTGGATGAAGACTTAGCCCGGGTCTTCGTATGT TTGCACTTTAGTGAATGATTGTCGTTTACTTGCTTGTTATTTTGATTTTATTGAACCCTCTTTTGTTTGTCCAAGCTGCA ATAGTTCTGCGGTTTTTTTTTTTGTGTGGCTGATAAGACATTTTCTTTTCAGAACTTGGTTTGGATTGAGGAGGTCCGCC TTGATCCTCTTACTAGGCATGATGTATTAACCTCTAAACGTGTTTCTCCGATTTAATTAATGAAATTCAGTTAAAAATTA AAAAAAAGAAAAATAGAAGTCAACGGTTATAGTTTACAATTTCTTGTGTACTCAGACTTTGCTCTTACGTAATACATCCC GCGATCCAAATCCCTACCATCAACATTCATTGCTTTACAATTTATGAAACACATTGTCAAACTAATGCGAATAAATATAA TTATTTGTATTATTT
CDS sequence (LotjaGi6g1v0002200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAATCCCCAAACTTCCTCGCATTCTTATGCCGTCCTCTTCCTTCCTTCCATATGCTCAACAGACCAGCCACCGTCTT CATTCAAACTCCTCATTGCCACCGCAAAATTCCTACTATTGATGATGCTGTGGCTTTGTTTCGTCGCATGCTCCATATGC ATCCCCCACCATCGGTTGTGGAATTCACCAAAATCCTAGGAGCAATTGTAAATATGAAAGACTATGCCATACCTATCTAT CTTTATACTCAAATGGAATCTAGGGGCATCCTGCCATATACAGTTACTTTAAACATCTTGATGAATTGTTACTGCCATCT GGGTCAGCTGGGTTTTGCTTTCTCTGTACTGGGTAAGATTCTTAAGTTGGGTTACCAACCAAGTGTTGTATCTTTGACTA CACTAATGAAGGGCTTGTGCATTACTGGTAAGGTGTTGGATGCATGTACAATTCATGACAATATAGTCTCAAAAGGGTTC CACTCAGATGAAGTTATGTATGGAACCTTAATGAGTGGTCTGTGTAAGAGTAAAGGATCAGGAAATGCCATTGAAACACT TCAAGAATTGGAGGCCTTACAATTGGTTAAGCCGAATTTTGTAATCTACAATACAGTCATTCATGGTTTGTGCAAAGATG GACTTGTAAACAAGGCACAGAAATTGTGTTCTGAAATGATTCAACGGGGAATTTTCCCTGATGTTGTCACTTTTAGTTCG TTAATTTATGGCTTCTGTCATGCAGGTCAGTGGAAAGATGTCAGGTTATTGCTAAATGAGAAGAGTCTAGATGTTTGTTC CTTCAACATAATAATGGATGCATTATGCAAACAAGGGCTGCTCTTAGAAGCCCATGCTGTTTGTTATGAGATGATTAAAA GAGGTGTTCAGCCTGATGTTATTTCTTACACTATTTTAATGGATGGCTATTGTTTAAAAAGTAAAGTGGACGAGGCAAGA AAATTATTTGATATGATGATTGAAGCGGGTTTGGTGCCTGATGTTTGGAGTTATAACATCCTGATTCAAGGCTACTGCAA GATTGAAAGAGTCGATGAAGCTATGAATCTATGTGAAGATATGCTCACTAAGAATTTAGTTCCAAACACTGTCACCTACA AATATCTGTTTGATGGCTTGTGCAGATTTGGGAGACTCCCTGATGCATGGAACTTTCTTACTCGAATGCATTATCGTGGC CATCGACCCCCTGATCTTACCCCTTACAATATCATATTAGAAACTTTATGCGAACAGCATCTGGATAAGGCAAACAAAAT TTTTAATTCCCTCATCCCTGAACCTAATGTTCAGAGTTACAACATCTTGATTAGTGGTTATTGCAAGAATGGAAGAGTAG ATGAAGCTATGAGTATTTATCAAAATATGTGTTTGAGGAATATAGTTCGAGATAGTGAAACCTTCAAGTTGTTGATAAAT GCTTTCTGCAAACGGAAGCAATGTGACAAGGCAATTGCATTATATAAAAATAATCGTGACTTGTGCCCATTCAAAATACT TATGGATGGCTTGCGCAAAAATGGAATGGAGGAGGTAGCACAGAGGGTTTCCCAGCTTTATGGAGCCTGTGATCCAGATG TGGCATTAGTTCGGAATCAATTAGCTCTCTAA
Protein sequence (LotjaGi6g1v0002200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQSPNFLAFLCRPLPSFHMLNRPATVFIQTPHCHRKIPTIDDAVALFRRMLHMHPPPSVVEFTKILGAIVNMKDYAIPIY LYTQMESRGILPYTVTLNILMNCYCHLGQLGFAFSVLGKILKLGYQPSVVSLTTLMKGLCITGKVLDACTIHDNIVSKGF HSDEVMYGTLMSGLCKSKGSGNAIETLQELEALQLVKPNFVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSS LIYGFCHAGQWKDVRLLLNEKSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKSKVDEAR KLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNTVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG HRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN AFCKRKQCDKAIALYKNNRDLCPFKILMDGLRKNGMEEVAQRVSQLYGACDPDVALVRNQLAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 24 | 145 | 122 | 5.1E-19 | ||
| PANTHER | 40 | 254 | 215 | 1.1E-102 | – | |
| ProSiteProfiles | 58 | 92 | 35 | 6.993 | ||
| ProSiteProfiles | 93 | 127 | 35 | 9.613 | ||
| Pfam | 94 | 140 | 47 | 1.5E-8 | ||
| TIGRFAM | 95 | 128 | 34 | 2.7E-5 | ||
| ProSiteProfiles | 128 | 162 | 35 | 8.331 | ||
| Gene3D | 146 | 261 | 116 | 2.5E-29 | ||
| ProSiteProfiles | 163 | 197 | 35 | 7.914 | ||
| Pfam | 165 | 191 | 27 | 0.46 | ||
| Pfam | 198 | 247 | 50 | 3.1E-17 | ||
| ProSiteProfiles | 199 | 233 | 35 | 12.342 | ||
| TIGRFAM | 201 | 235 | 35 | 2.5E-8 | ||
| ProSiteProfiles | 234 | 260 | 27 | 6.884 | ||
| TIGRFAM | 236 | 260 | 25 | 0.0028 | ||
| Gene3D | 262 | 328 | 67 | 5.9E-19 | ||
| PANTHER | 263 | 401 | 139 | 1.1E-102 | – | |
| ProSiteProfiles | 264 | 298 | 35 | 11.696 | ||
| Pfam | 264 | 311 | 48 | 9.2E-15 | ||
| TIGRFAM | 267 | 300 | 34 | 1.9E-8 | ||
| ProSiteProfiles | 299 | 333 | 35 | 13.088 | ||
| TIGRFAM | 301 | 335 | 35 | 2.3E-10 | ||
| SUPERFAMILY | 303 | 504 | 202 | 4.18E-7 | – | |
| Gene3D | 329 | 419 | 91 | 1.5E-24 | ||
| Pfam | 333 | 382 | 50 | 9.5E-17 | ||
| ProSiteProfiles | 334 | 368 | 35 | 12.627 | ||
| TIGRFAM | 337 | 370 | 34 | 2.3E-8 | ||
| ProSiteProfiles | 369 | 403 | 35 | 11.082 | ||
| PANTHER | 395 | 523 | 129 | 1.1E-102 | – | |
| Gene3D | 420 | 531 | 112 | 2.9E-24 | ||
| Pfam | 435 | 484 | 50 | 6.5E-15 | ||
| ProSiteProfiles | 436 | 470 | 35 | 12.529 | ||
| TIGRFAM | 439 | 471 | 33 | 8.5E-11 | ||
| ProSiteProfiles | 471 | 501 | 31 | 7.75 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0002200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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