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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0004100 |
| Transcript ID | LotjaGi6g1v0004100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1; TrEMBL-Plants: tr|A0A072VHI8|A0A072VHI8_MEDTR Disease resistance protein (CC-NBS-LRR class) family protein; Found in the gene: LotjaGi6g1v0004100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:834591..838251) extracted from Lotus japonicus Gifu genome v1.2.
TCTGTCGGTTTCTTTGAATTCGCTTCCTTCTAATCTTACATCTACAAAGACACCAAACCATGGCTCTGGAACTTGTTGCT GGACCTCTAATGGAAGCTGTTTTCAGTGTGTTGCTTGAAAGGATAGCTTCTTCTGAAATTTTCAACTTCTTTAAGAAGAA CAAAAGTGACAAGTTCCTCAAAAGGATGAAGATCATCTTGTTGTCAGTCCATGCTGTGCTCAATGATGCTGAAGAAAAGA AAATTAGAAATGAAGCAGTGAAGGAGTGGCTTGAGGAGCTTAAAGATGTAGCCTTTGATGCTGATGACTTACTTGATGAG ATCTACACTGTTGAGAAAGTCAAGGAAAAAGAGGTAAATACAATCCACCCCACTACTTCAAATTTATGTGGTAAGGATCT TGAACAAAAGTTACAAGATATTGTTGAAAGATTAGAGTTTATTATAAACCAGAAAGAAGTACTTGATCTGAAGGTGGGTA AGGAAGTGAAAATGGCACACAAGACACCAACCTCATCATTGGTAGAAGAATGTGATGTGTATGGAAGGGATAATGATAAA GAAATCTTAGTTAACTTGCTATTGACAAATGATGCTAATGATGAAAAATTAGGTGTCATTCCCATTGTTGGGATGGGGGG AATTGGGAAAACCACCTTAGCTCAAGTAGTATACAATGATCATAGAATACAGAAGGAATTTGATCTCGAAGCATGGATTT ATGTCTCTGAAGAATTTGATATCTGCAAGATCACAAAGAACCTTTTGGAGGTTGTCACATCATGTAAATGTGATATTGAA GATTTAAATTCACTCCAGAGGAATCTCAAAATGCACTTGTTGAAGAAAAAGTTTTTATTTGTGTTGGATGATGTTTGGAA TGAAAATTATGATAATTGGGACAAATTCAGGACTCCATTTAAACATGCAGGAGCTCATGGAAGTAAGATTATTGTAACTA CACGAAGCGGGCATGTTGCATCCATCATGCAAACTCTTCCACCTTATTATCTCAGTGAATTGTCCTATGAATACTGTTGG GATTTGTTTTCAAAGCATGCTTTTGATTATGGGGATTCAAATGTCCATCAAAGTGTGGAAAAAGTTGGAAGAGAAATAGT TAGGAAGTGCAATGGATTGCCTTTGGCTGTGAAGACACTTGCAGGACTTTTGAGGTCAAAAAGTGAAAGGCAAGAGTGGC ATAAAGTGTTGAACAGTGAGATATGGGATCTGCAAGATCATGAGAGCAGTATCCTTCCAGCTTTGAGATTAAGTTACCAT TATCTCCCTTCTCATTTAAAGCGATGTTTTGCTTATTGCGCGATTTTCCCAAAAGACTACGAATTCGCAAAGGAGAACCT AATTTTGCTGTGGATGGCAGAAGGTTTGCTCCAACAATCAAAAAGACATGGAAGAATTGAAGAAGCTGGGAACGAGTATT TCTGTGAATTAGTATCAAGATCATTTTTCCAGCAATCAAGACGCGACAAGTCATGTTACCTAATGCATCATCTTGTAAAT GACTTGGCTCAATATGTGTCTGGGGCATTTTCTGTCCGAATAGAAGGTAACAATTCTAATCAAGTTGAAGAAAGAACTCG CCATTTGTCTCATGTTATTTCACATAGTTCCTCATATGTAAACCTGAAAGATGTTTCCAAAGCAAATCGACTCCACACCT TTCTGCAAATAAGAACAATAGGTACTTCTATCGACATGTTCAACGACATGCCAAATGATCTGTTGACAAAGTTAAGGTGC TTAAGGGAGTTATCTTTGGTAGGTGCATATTTTTATAGTTTACCTGATTCAATAGGTGAACTTAAACATCTGCGCTATCT CGAAGTTTCTGACACTGAGATCATGAGGTTACCTGAATCAATCTGCAGCTTGCACAATTTACAAACTCTGAAGTTAGTTG GATGTTACAAGCTCAGCGAACTGCCAACAGACATTCACAAGCTTGTCAACTTGCGCTATCTTGATATCAGAGACACATGT TTGAAGTGGATGCCATTGCAAATCAGTGAGTTAAAAAACCTCCAAGGGTTGAGTGACTTTTTTGTTGGAGATGATTATGG ATCTTCAATTGGTGAGCTGGGAGAGTTATCTACTTTACATGGTACCTTGTCCATTCATTACATAGAACATGTTGCTAATT CTAAGGAATCCGAGAAGGCAAAGTTGAAGGAAAAGCATGGCCTTGAAATGCTATCCTTAGATTGGGGTGGGTGTGGTGAT ACTGATGACTCTCAGCATGAAAAAACCATACTAGATAGCCTGCTACCTCATACTAATTTGAAGAAACTTGCTATCTATGA CTATCCAGGCACAGAGTTTTCAGATTGGTTGGGGGATTACTCCTATTGCAACTTGGTGTTCTTGCAGCTCAAGGGCTGTA AATATTGCTACAAATTGCCTCCACTTGGACAACTTCCAATGTTGAAAGAGCTTCAGATTATTAAATTTGAAGGGCTAGTG AATGTGGGGTCTGAGTTTTATGGAAACAGAACTTGTGCAACGGAAAGCTTTCCAGCACTGGAAATTCTAAGGATTGAGTC TATGACAGCATTGGAGAAATGGTGTTCTGGTGCTGACATGGCAGGTAGCAGAGCATTTTCTCATCTTAGAGAGTTTTACA TTGAAGGGTGTCCCAAACTGAGAGGGGATTTACCAAGAAACCTTCCATCTTTGACATTACTTGTAATCAGAGATTGCAAG CGTTTGCTTTGTTCACTTCCCAGATCCCCAGCTTTGCGGGTGCTGAACATTCAAAATTGTGAGAAGCTAGAATTCCCCAT GCATGAAACTTGGTACCACCAATCACTGACATCTTTGTTCCTACTTGATAGTTGTGACTCACTCATGTTATTGCCTTTGG ATCTCTTCCCCAACCTCAAGTCTCTAGATATTTGGAGATGTAAGAATCTGGAAGCACTTACTGTTTCTGCATCAGATTCA GATGCAACTCCTCCAAATTTGAAGTCCCTCCATTCCCTTTGCATAAGGCATTGTCCAAAATTCTTATCATTTCCTAAAGG AGGATTTGCAGCTCCAAATCTGACTTTATTAACCATAAGCTACTGTGAGAGGTTGAATTCTCTTCCTGAAAAAATGAATG AGCTCATGCCAAGCTTGAAAGAACTTCAACTGCGGGGCTGTCCACAGATTGAGTCATCTACTATGAGGCCACTCAGGATT CGGATTTGCAACAAACTTATGGAAGGGAAACAAAACCACTCTGATCCTCTCTTTGCTAGGTTGGAGGGTCTGGCCTCTAT TCATAGTCCCTCATCAAGTTAATGGGTTACTAGTTACTACACACCTCCATGCATTCATGGTTGAATATTGAGGCTATGTT TGGATTAACAGATAGAATGCAACTTTGTCAAATTATTATTCTGTTTAATTCAATATTAGTGAACAATAGATTGAATGCCT GCGAATTCACATTTTCAATGCAACTCTATGGCTTTTATCACTGAATAATGATTCATAGACATCTAAATAGTAAAAACACC CCAAACACCCATTTTTCCTGCGGATTTGGCCAAATAATACACTGAACTAACCACCTAAATACACATGACTAACCATAAAG CACATAACCGTGTAAACTCAGTTGAAATTCATAAATTCAATTTTACACGGTTCTGTGCTTT
CDS sequence (LotjaGi6g1v0004100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCTGGAACTTGTTGCTGGACCTCTAATGGAAGCTGTTTTCAGTGTGTTGCTTGAAAGGATAGCTTCTTCTGAAAT TTTCAACTTCTTTAAGAAGAACAAAAGTGACAAGTTCCTCAAAAGGATGAAGATCATCTTGTTGTCAGTCCATGCTGTGC TCAATGATGCTGAAGAAAAGAAAATTAGAAATGAAGCAGTGAAGGAGTGGCTTGAGGAGCTTAAAGATGTAGCCTTTGAT GCTGATGACTTACTTGATGAGATCTACACTGTTGAGAAAGTCAAGGAAAAAGAGGTAAATACAATCCACCCCACTACTTC AAATTTATGTGGTAAGGATCTTGAACAAAAGTTACAAGATATTGTTGAAAGATTAGAGTTTATTATAAACCAGAAAGAAG TACTTGATCTGAAGGTGGGTAAGGAAGTGAAAATGGCACACAAGACACCAACCTCATCATTGGTAGAAGAATGTGATGTG TATGGAAGGGATAATGATAAAGAAATCTTAGTTAACTTGCTATTGACAAATGATGCTAATGATGAAAAATTAGGTGTCAT TCCCATTGTTGGGATGGGGGGAATTGGGAAAACCACCTTAGCTCAAGTAGTATACAATGATCATAGAATACAGAAGGAAT TTGATCTCGAAGCATGGATTTATGTCTCTGAAGAATTTGATATCTGCAAGATCACAAAGAACCTTTTGGAGGTTGTCACA TCATGTAAATGTGATATTGAAGATTTAAATTCACTCCAGAGGAATCTCAAAATGCACTTGTTGAAGAAAAAGTTTTTATT TGTGTTGGATGATGTTTGGAATGAAAATTATGATAATTGGGACAAATTCAGGACTCCATTTAAACATGCAGGAGCTCATG GAAGTAAGATTATTGTAACTACACGAAGCGGGCATGTTGCATCCATCATGCAAACTCTTCCACCTTATTATCTCAGTGAA TTGTCCTATGAATACTGTTGGGATTTGTTTTCAAAGCATGCTTTTGATTATGGGGATTCAAATGTCCATCAAAGTGTGGA AAAAGTTGGAAGAGAAATAGTTAGGAAGTGCAATGGATTGCCTTTGGCTGTGAAGACACTTGCAGGACTTTTGAGGTCAA AAAGTGAAAGGCAAGAGTGGCATAAAGTGTTGAACAGTGAGATATGGGATCTGCAAGATCATGAGAGCAGTATCCTTCCA GCTTTGAGATTAAGTTACCATTATCTCCCTTCTCATTTAAAGCGATGTTTTGCTTATTGCGCGATTTTCCCAAAAGACTA CGAATTCGCAAAGGAGAACCTAATTTTGCTGTGGATGGCAGAAGGTTTGCTCCAACAATCAAAAAGACATGGAAGAATTG AAGAAGCTGGGAACGAGTATTTCTGTGAATTAGTATCAAGATCATTTTTCCAGCAATCAAGACGCGACAAGTCATGTTAC CTAATGCATCATCTTGTAAATGACTTGGCTCAATATGTGTCTGGGGCATTTTCTGTCCGAATAGAAGGTAACAATTCTAA TCAAGTTGAAGAAAGAACTCGCCATTTGTCTCATGTTATTTCACATAGTTCCTCATATGTAAACCTGAAAGATGTTTCCA AAGCAAATCGACTCCACACCTTTCTGCAAATAAGAACAATAGGTACTTCTATCGACATGTTCAACGACATGCCAAATGAT CTGTTGACAAAGTTAAGGTGCTTAAGGGAGTTATCTTTGGTAGGTGCATATTTTTATAGTTTACCTGATTCAATAGGTGA ACTTAAACATCTGCGCTATCTCGAAGTTTCTGACACTGAGATCATGAGGTTACCTGAATCAATCTGCAGCTTGCACAATT TACAAACTCTGAAGTTAGTTGGATGTTACAAGCTCAGCGAACTGCCAACAGACATTCACAAGCTTGTCAACTTGCGCTAT CTTGATATCAGAGACACATGTTTGAAGTGGATGCCATTGCAAATCAGTGAGTTAAAAAACCTCCAAGGGTTGAGTGACTT TTTTGTTGGAGATGATTATGGATCTTCAATTGGTGAGCTGGGAGAGTTATCTACTTTACATGGTACCTTGTCCATTCATT ACATAGAACATGTTGCTAATTCTAAGGAATCCGAGAAGGCAAAGTTGAAGGAAAAGCATGGCCTTGAAATGCTATCCTTA GATTGGGGTGGGTGTGGTGATACTGATGACTCTCAGCATGAAAAAACCATACTAGATAGCCTGCTACCTCATACTAATTT GAAGAAACTTGCTATCTATGACTATCCAGGCACAGAGTTTTCAGATTGGTTGGGGGATTACTCCTATTGCAACTTGGTGT TCTTGCAGCTCAAGGGCTGTAAATATTGCTACAAATTGCCTCCACTTGGACAACTTCCAATGTTGAAAGAGCTTCAGATT ATTAAATTTGAAGGGCTAGTGAATGTGGGGTCTGAGTTTTATGGAAACAGAACTTGTGCAACGGAAAGCTTTCCAGCACT GGAAATTCTAAGGATTGAGTCTATGACAGCATTGGAGAAATGGTGTTCTGGTGCTGACATGGCAGGTAGCAGAGCATTTT CTCATCTTAGAGAGTTTTACATTGAAGGGTGTCCCAAACTGAGAGGGGATTTACCAAGAAACCTTCCATCTTTGACATTA CTTGTAATCAGAGATTGCAAGCGTTTGCTTTGTTCACTTCCCAGATCCCCAGCTTTGCGGGTGCTGAACATTCAAAATTG TGAGAAGCTAGAATTCCCCATGCATGAAACTTGGTACCACCAATCACTGACATCTTTGTTCCTACTTGATAGTTGTGACT CACTCATGTTATTGCCTTTGGATCTCTTCCCCAACCTCAAGTCTCTAGATATTTGGAGATGTAAGAATCTGGAAGCACTT ACTGTTTCTGCATCAGATTCAGATGCAACTCCTCCAAATTTGAAGTCCCTCCATTCCCTTTGCATAAGGCATTGTCCAAA ATTCTTATCATTTCCTAAAGGAGGATTTGCAGCTCCAAATCTGACTTTATTAACCATAAGCTACTGTGAGAGGTTGAATT CTCTTCCTGAAAAAATGAATGAGCTCATGCCAAGCTTGAAAGAACTTCAACTGCGGGGCTGTCCACAGATTGAGTCATCT ACTATGAGGCCACTCAGGATTCGGATTTGCAACAAACTTATGGAAGGGAAACAAAACCACTCTGATCCTCTCTTTGCTAG GTTGGAGGGTCTGGCCTCTATTCATAGTCCCTCATCAAGTTAA
Protein sequence (LotjaGi6g1v0004100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALELVAGPLMEAVFSVLLERIASSEIFNFFKKNKSDKFLKRMKIILLSVHAVLNDAEEKKIRNEAVKEWLEELKDVAFD ADDLLDEIYTVEKVKEKEVNTIHPTTSNLCGKDLEQKLQDIVERLEFIINQKEVLDLKVGKEVKMAHKTPTSSLVEECDV YGRDNDKEILVNLLLTNDANDEKLGVIPIVGMGGIGKTTLAQVVYNDHRIQKEFDLEAWIYVSEEFDICKITKNLLEVVT SCKCDIEDLNSLQRNLKMHLLKKKFLFVLDDVWNENYDNWDKFRTPFKHAGAHGSKIIVTTRSGHVASIMQTLPPYYLSE LSYEYCWDLFSKHAFDYGDSNVHQSVEKVGREIVRKCNGLPLAVKTLAGLLRSKSERQEWHKVLNSEIWDLQDHESSILP ALRLSYHYLPSHLKRCFAYCAIFPKDYEFAKENLILLWMAEGLLQQSKRHGRIEEAGNEYFCELVSRSFFQQSRRDKSCY LMHHLVNDLAQYVSGAFSVRIEGNNSNQVEERTRHLSHVISHSSSYVNLKDVSKANRLHTFLQIRTIGTSIDMFNDMPND LLTKLRCLRELSLVGAYFYSLPDSIGELKHLRYLEVSDTEIMRLPESICSLHNLQTLKLVGCYKLSELPTDIHKLVNLRY LDIRDTCLKWMPLQISELKNLQGLSDFFVGDDYGSSIGELGELSTLHGTLSIHYIEHVANSKESEKAKLKEKHGLEMLSL DWGGCGDTDDSQHEKTILDSLLPHTNLKKLAIYDYPGTEFSDWLGDYSYCNLVFLQLKGCKYCYKLPPLGQLPMLKELQI IKFEGLVNVGSEFYGNRTCATESFPALEILRIESMTALEKWCSGADMAGSRAFSHLREFYIEGCPKLRGDLPRNLPSLTL LVIRDCKRLLCSLPRSPALRVLNIQNCEKLEFPMHETWYHQSLTSLFLLDSCDSLMLLPLDLFPNLKSLDIWRCKNLEAL TVSASDSDATPPNLKSLHSLCIRHCPKFLSFPKGGFAAPNLTLLTISYCERLNSLPEKMNELMPSLKELQLRGCPQIESS TMRPLRIRICNKLMEGKQNHSDPLFARLEGLASIHSPSSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 11 | 93 | 83 | 1.6E-17 | ||
| PANTHER | 38 | 1043 | 1006 | 1.2E-210 | – | |
| PANTHER | 38 | 1043 | 1006 | 1.2E-210 | – | |
| CDD | 47 | 88 | 42 | 1.4043E-7 | ||
| Coils | 111 | 131 | 21 | - | – | |
| Gene3D | 141 | 313 | 173 | 1.3E-39 | – | |
| SUPERFAMILY | 148 | 420 | 273 | 1.26E-72 | ||
| Pfam | 171 | 386 | 216 | 1.2E-53 | ||
| PRINTS | 186 | 201 | 16 | 4.7E-19 | – | |
| PRINTS | 259 | 273 | 15 | 4.7E-19 | – | |
| Gene3D | 340 | 408 | 69 | 3.1E-5 | – | |
| PRINTS | 357 | 371 | 15 | 4.7E-19 | – | |
| SUPERFAMILY | 482 | 888 | 407 | 1.63E-36 | – | |
| Gene3D | 498 | 666 | 169 | 2.9E-21 | ||
| Gene3D | 673 | 871 | 199 | 1.4E-16 | ||
| SUPERFAMILY | 844 | 1040 | 197 | 1.69E-19 | – | |
| Gene3D | 872 | 967 | 96 | 1.6E-7 | ||
| PRINTS | 873 | 889 | 17 | 4.7E-19 | – | |
| Gene3D | 968 | 1061 | 94 | 1.5E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi6g1v0004100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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