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LotjaGi6g1v0015700.2

Overview

Field Value
Gene ID LotjaGi6g1v0015700
Transcript ID LotjaGi6g1v0015700.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description protein kinase family protein; TAIR: AT5G04870.1 calcium dependent protein kinase 1; Swiss-Prot: sp|Q06850|CDPK1_ARATH Calcium-dependent protein kinase 1; TrEMBL-Plants: tr|D3G9M7|D3G9M7_SOYBN Calcium dependent protein kinase; Found in the gene: LotjaGi6g1v0015700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:2784453..2788351) extracted from Lotus japonicus Gifu genome v1.2.

ATGGGGAACACTTGTGTTGGTCCTAGCATTTCGAAGAATGGTATTTTTCATTCAGTTTCTCAAGCAATTTGGCGGTCCGA AGCGCCTGAAGGATCTGTGTCTACTAGAGGATCTGTAAATGAGGGAACAGCTAATGAGCCTGAATCACCCTTGCCTGTCC AAAGCAAACCTCCTGAGCAGATCACTATGCCGAAACCGGAAGCAGTGCAAAAGACGAAATCAGAAACAGAACCGGAACCG GAAAAGGAGAAGAATAAACCAAAGAGACCTACTTCTGTGAAGAGAGTTTCCAGTGCAGGACTTCGCGTTGATTCTGTGTT ACAGAGAGAAACAGAGAATTTCAAGGAATTCTTCAAGCTAGGGAGGAAACTGGGACAGGGTCAGTTCGGGACAACATTCT TGTGTGTGGAGAAGGCTACCGGTCATGAGTATGCCTGTAAGTCTATCGCGAAGAGGAAGCTGGTAGCAGATGACGATGTT GAGGATGTGAGAAGAGAAATTCAGATAATGCACCATTTGTCTGGGAATCCCAATGTAATTTCCATCAAAGGTGCTTATGA GGATGCGGTGGCTGTCCATGTTGTGATGGAATTATGTGCTGGTGGTGAGCTTTTTGATCGGATCATTCAGCGTGGGCATT ATACTGAAAGAAAGGCAGCTGAACTTACTAGGACTATAGTTGGGGTCGTGGAAGCTTGTCATTCTCTAAGTGTGATGCAT AGAGACCTTAAACCGGAGAATTTTCTCTTTGTCAATCAGCATGAGGATTCACTTCTAAAAACCATTGACTTTGGGTTATC TGTATTCTTTAAGCCAGGTATTTTCTGATGCTCATACATACTATAGTATTACGACTAAAAGTGTAAAGTTTGAGTTTATC TCATATTTAGGGTGCAAGATCTACAAATTTAACGTAAAAATGCATACACGCATATGAATTAAAACATTTGTAAAGGCCCA ATGTATAAAATTAAAAGTTGAGCCGCAAAAATTGAGAAAAGGCATATCTTGAGACCAAAATTGTAGCTTTCCATGATTTT TTTGTATGTACAGAAAGGGAGCATGGGTGGGGATGGAGATATCATCGGCAGCTGAATTTGGTCTCAAGGCTTCAATCATC TCTTGAATTTCATGATATGCTGAATCTTTTATATGACATATGCTTCATTAAACTGGATTAGTAATTTAAGGTGCTTGGAA TTTGCGAATACGCAATGCATTACTATTGTCGTGTATGAACTTCCTAAGTGTTTTTGTCCTATAGACTTTTTAGTTTCCAA AAGCCTTGGTAGTTCTCTTCGACTTTGAATATCTTTGAAGTTTTGAAGATTTTTTCATCTTCTATATTCTATGATACTAG GAATAATAGTAAGTCCTTATTAGTATTGATGTACTCATTAGGTATGAGTTATGACTGTTCCTTATGTTCCTGGGACTCTG GGAGAGAATTTTTTTAATAGGCTATGTATCTAGTTTTGAGTTCTATATGGGATGTGTCATGTGCGTGCCTTTGATTTATA CTGTTAATTCTGCCACTTTGTAGATATTCATCTAAGTGGACTTGTGTATACTGTAACTATACAGTTGGTGGTGGATCTAA GCTGCTGTTATTTTCCAATTCTTTCTTCATTTATTTTTAGTGTATATGATGATAAGAATCTTTGGTGAACACTGAATGCT GGCATCGCGCCACTTGCTTGCGGCTGAGATACATGGTGAAAGACTTTGACACCAAATAATAAGAATCTCGGGAGAATGAT AGGAACAGAGAATTATATTATAGAATAATTATACAAGTGCTGGTTTTCGAGAGCCAGCCTCTCCTAGTTCTGGAATTTGA GAGTCCAGACTCTCCCACCATAACACACAACTTCTGAATAATCCTAACAGAAGATACAACTCCTATTTATAACCACTCTT ATATTATTTAAATTCAAACCATAGCAGTTACCTAACTGCTTTAATCATAAAATTACCCAACTAATAAATTAAATAATAAC TTCCTAACTGCTACTGTTCACGAGTACTGTTCATGCAGTTTCCTATCAGAGAACCACCCCACAAAAGCTAGCTGTTGTAG TTGGAGAGCCTAAAGCCTTGAACCTCACTCCAGAATCCCATACTTCGGATGGGAACTCCCATACCTTGCAATTGGATCCT AACCATATATGATGTGACAATAAAATCATATACATTGAAAATCTTATTTTTAACATATATACTTTATCGGGTTTCATGTA TTGTACTGGTTTCACTATGTGATTAACTTGTACATTTTTTAACTTAAGCTTCATACAATTTGAAGAAGTAAATTAATACC TTGGCGAAAAACTGATTATATTTTGCTTACAGGTGATATATTTAATGATGTGGTTGGCAGCCCTTATTATGTTGCTCCAG AAGTATTGCGGAAGCGTTATGGTCCTGAAGCAGATGTGTGGAGTGCTGGAGTTATCCTTTACATTCTTTTGAGTGGAGTA CCTCCATTCTGGGCAGGTGAGATCGGATCCTATGGATTTATTTGAAAATTGTAATTTTAATCTTCATTCTCTGATTCTCG TAAATTTATGCTCATAATTTTCTGATTATTAATTTCCCTTCCCTCTTCGTATGCTTATAATGGTTGTGCAGAAAGTGAAC AAGGAATATTTGAACAGGTTCTGCATGGTGATCTTGACTTCTCTTCAGATCCCTGGCCTGCAATTTCTGAAAGTGCAAAA GATTTAGTAAGGAAAATGCTTGTTCGTGACCCTAGGAGGCGGCTGACTGCACATCAAGTATTATGTAAATACGTTTTTAC TAGTTTATTTTTAGTGATTATCTTGGCATTATTTGGTTTGTGCAAGGATATGGGAGTTTGTTGAGCAATACTGATGTCAA ATTTTGTGGCTTTGCAAAAACTTGCTATGAAGTTGATGTTAGTCACTCATGAAGAAAAGGTCTTCTACCAAGCTATGTAA AATAGCTACAAGACTTCTGCCTGGGGAAACCGGCTATGTTCGCAAACATTTGCCTTTTATGATTCTCAGCACAGAAGTCT TGTATACTTTAACATTGAAAAGTCTAAGTTACCTCAAGAAATGGTAATTATTAAAACATATTTTTGAGTATTAAGCCTTG ATTTACCTTCCTAAGCCATGCTCTTGACATGGTCTACTATTTCTTTTGCGTGTCAATGGTGCATTCTGATTGTTCATAGT GCTGTTTGTATTGTAAAAGGAAGTCTAAAAGATTTGACATTATAGTACATCTAGATCAAGTGCTCATTTTAACATTCTTT TAATGTCACTGCAATATATGATGTTTGTGTGTGGATTGCTTGTCCTATTTATATCACAAGATTGATTGAGCTTCTCCTTA ATGAATAATAGTGGAAGAATGATATCTCTTCCGTGATCTTGTGGATTTTAACCATTTCTATGCTTTATGGGAAAGCCCAA GCCAGTTGTTTGGACAAATTATTTCCAATTATCATTACCAGATTTGGAGTAATATGGCATTCCATGACACTTCTTTTTTC CTTTGTAGCTTATAGATGTTTAATTTCCTGCAGGTCATCCTTGGATTCAAGTTGATGGTGTAGCTCCTGACAAGCCACTT GATTCTGCTGTCTTAAGTCGCTTGAAGCAATTTTCTGCTATGAACAAGCTTAAAAAAATGGCTCTTATAGTAAGTATCTG GATGTGGAAGCTTCGAAGTTATTTGATATATGATTCGAACTTGATATCCATGAAATTGAGTACCAAGATACCTATAATAA ATGTGTTAGATTAGAATTGGAAGTCTTATTACGGATATTTCGATGCAAGTTGAAAATGAGATTTTATATTATTTGCACCT TCTCATTTCATTATCCTTTGCGTTTTCAGATTATTGCAGAGACCTTATCTGAAGAAGAA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0015700.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGGAACACTTGTGTTGGTCCTAGCATTTCGAAGAATGGTATTTTTCATTCAGTTTCTCAAGCAATTTGGCGGTCCGA AGCGCCTGAAGGATCTGTGTCTACTAGAGGATCTGTAAATGAGGGAACAGCTAATGAGCCTGAATCACCCTTGCCTGTCC AAAGCAAACCTCCTGAGCAGATCACTATGCCGAAACCGGAAGCAGTGCAAAAGACGAAATCAGAAACAGAACCGGAACCG GAAAAGGAGAAGAATAAACCAAAGAGACCTACTTCTGTGAAGAGAGTTTCCAGTGCAGGACTTCGCGTTGATTCTGTGTT ACAGAGAGAAACAGAGAATTTCAAGGAATTCTTCAAGCTAGGGAGGAAACTGGGACAGGGTCAGTTCGGGACAACATTCT TGTGTGTGGAGAAGGCTACCGGTCATGAGTATGCCTGTAAGTCTATCGCGAAGAGGAAGCTGGTAGCAGATGACGATGTT GAGGATGTGAGAAGAGAAATTCAGATAATGCACCATTTGTCTGGGAATCCCAATGTAATTTCCATCAAAGGTGCTTATGA GGATGCGGTGGCTGTCCATGTTGTGATGGAATTATGTGCTGGTGGTGAGCTTTTTGATCGGATCATTCAGCGTGGGCATT ATACTGAAAGAAAGGCAGCTGAACTTACTAGGACTATAGTTGGGGTCGTGGAAGCTTGTCATTCTCTAAGTGTGATGCAT AGAGACCTTAAACCGGAGAATTTTCTCTTTGTCAATCAGCATGAGGATTCACTTCTAAAAACCATTGACTTTGGGTTATC TGTATTCTTTAAGCCAGGTGATATATTTAATGATGTGGTTGGCAGCCCTTATTATGTTGCTCCAGAAGTATTGCGGAAGC GTTATGGTCCTGAAGCAGATGTGTGGAGTGCTGGAGTTATCCTTTACATTCTTTTGAGTGGAGTACCTCCATTCTGGGCA GAAAGTGAACAAGGAATATTTGAACAGGTTCTGCATGGTGATCTTGACTTCTCTTCAGATCCCTGGCCTGCAATTTCTGA AAGTGCAAAAGATTTAGTAAGGAAAATGCTTGTTCGTGACCCTAGGAGGCGGCTGACTGCACATCAAGTATTATGTAAAT ACGTCATCCTTGGATTCAAGTTGATGGTGTAG
Download CDS Sequence

Protein sequence (LotjaGi6g1v0015700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGNTCVGPSISKNGIFHSVSQAIWRSEAPEGSVSTRGSVNEGTANEPESPLPVQSKPPEQITMPKPEAVQKTKSETEPEP EKEKNKPKRPTSVKRVSSAGLRVDSVLQRETENFKEFFKLGRKLGQGQFGTTFLCVEKATGHEYACKSIAKRKLVADDDV EDVRREIQIMHHLSGNPNVISIKGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELTRTIVGVVEACHSLSVMH RDLKPENFLFVNQHEDSLLKTIDFGLSVFFKPGDIFNDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLSGVPPFWA ESEQGIFEQVLHGDLDFSSDPWPAISESAKDLVRKMLVRDPRRRLTAHQVLCKYVILGFKLMV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
26 50 25 - –
MobiDBLite
mobidb-lite
26 97 72 - –
PANTHER
PTHR24349
51 372 322 2.6E-215 –
PANTHER
PTHR24349:SF320
51 372 322 2.6E-215 –
MobiDBLite
mobidb-lite
70 90 21 - –
CDD
cd05117
117 371 255 9.82942E-140 –
SUPERFAMILY
SSF56112
117 372 256 4.18E-78
IPR011009
SMART
SM00220
118 375 258 1.1E-90
IPR000719
ProSiteProfiles
PS50011
118 377 260 45.276
IPR000719
Gene3D
G3DSA:3.30.200.20
119 201 83 1.7E-104 –
Pfam
PF00069
119 373 255 1.8E-69
IPR000719
ProSitePatterns
PS00107
124 151 28 -
IPR017441
Gene3D
G3DSA:1.10.510.10
202 372 171 1.7E-104 –
ProSitePatterns
PS00108
238 250 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0015700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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