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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0023500 |
| Transcript ID | LotjaGi6g1v0023500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat and BTB/POZ domain protein; TAIR: AT2G04740.1 ankyrin repeat family protein; Swiss-Prot: sp|Q9SJ85|Y2474_ARATH BTB/POZ domain-containing protein At2g04740; TrEMBL-Plants: tr|A0A151R0P2|A0A151R0P2_CAJCA Ankyrin repeat and BTB/POZ domain-containing protein 1; Found in the gene: LotjaGi6g1v0023500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:4358436..4363663) extracted from Lotus japonicus Gifu genome v1.2.
TTTTCATTGATCACCCAAATTGTATGAGTTCTTGTATTTTTCAGTTTATTATATAAATTATAAAATAAAGCTATGTCGAT CTCGCTACGAGCAGAGTCTAGTGGCGGTATCGCTTAGAATAACCGAGTTGGAGACATGAGTTAGGTAGAGGAGATTCAAG GATTTATATGTAATTTATCTTTTCGATGTATAAAAAAAAGAGTGTAGAGATTCAAGGATTTATGTGTAATTTATCTTTTC GATGTATAAAAAAAAGAGTGTAACGGCGGTGCGAGAGGAGAACACAAGTTCTTACACCACTCAGCTCAGCTCAAACTAAA TTCCCTTTTCCCTTCCAATTCCTCAATCGGAATCCAAACCAAAATGCGGTTCATCGACCACGGCATGGACCTCGACCTGG ACCTGGACCTTGACCTCTCTGATTTCGGTTCGTCGGTGCCGCTCAAGAAGGTCCCTAACGGCGACATCTTCTCCGCGTCC CGTGCGGGTGACGTGGACCGCCTCCGGTACCTTCTCGAGTCCGGCGTCGACGTCAACGCCCGCGACCAGTGGGACTCCGT CGCCCTCTACTACGCTTGCCTCGCCGGCCACCTCGACGCCGCCCGCATGCTCCTCGAGAGCGGCGCCATCTGCTCCGAAC ACACTTTCGACGGTGACCGTTGCCACTACGCCGCTCTCAACTTGAAGGTCCGTAAACTCCTCAAGGCCTTTGAAGCTCGC CCTCCTCCCTTGGACCCCTTGCCCTCCTCCTTGCGTCTCACCTTCTTGTCCTGCCCCGCTAACTCCTCTGCCTCTCCATT TCCCAGTATGATCCTAACTCTTTCGGTTAGTTAGTTAGTTATTACTGTTGAGTTTTCAGTTATGACAGTTATGATTTCGT TACATTCTGTTTTTCAGTTTTGTTTATCGCAGTTTAGTTTCTGTTAGTTAGTTAGTTAAATTACATTCTGCTTTTCAGTT TTGTTTATCTTTTTCATTGTTAAACCATTCATGTGATTAAGTTTTCAGGATAGTAAGTGTCTGTTTGGTTTTCAGTTAGG AAGTCTGTTTGAAGCATTGGAATTCGAAATCGCGATTTCCAATGCACATTCAACCAACGGAATGCACTTGTTGGGTTGAG TGAATGTGCTTTCACATTCACCCAATTGAAAACCAAACAGGCTCTTAGTTCATGATATGGTATCAGTGTCTCCATGATTG GCGGTCTGGAGTTCGATCATGGCCTAAATTACTCTTGTAAATAGTTAAATTTCAGATGGGCATTGTCCTTTCTAGAGCCA ATTTGGCATTTAGTGACGAAGCTTGTACTAGGGCTTCCATACGTACTAAGACCAATGGGATCTTGTGAGAAGCGTGTTAG AAATATAATATGAAATCGTTCACGTGTAGACCCAAGGGATTGAGCTTTCAGGATAGTTAGTTCATGATATGGTATGGTAT CAGAGTTTCCATGACTGGTAGTCTAGAGTTCGATCATTGCCTTGATTAGTCTTGTAAATAGTTAAATTTTTAGCACGAGT AGGTGAGGGCGTGCATTGTCCTTGCAAGAGCCAATTTGGCATCTAGTGACGAAGCTTGTACTAAGGCTTCCAAACATACT AAGAGAATCTCCAATGCTTGGTACCTTTGTTGGTATCTTATCACTCTTTTTGTGGGCCTGAAATGCCACATAGGATATTA GGTACCCATAAGGCACTGATGCACATTTTGCTCCAACGCAAGGAAATTTAAGATATGGGATCTGAAGATAAGATCCAGCC CTAAGGTACTGCATTGGAGATGCTCTAAGACCAATGGATCTTATGTGAGGGGTGTGTTAAAACTATAATATAAAATCATT CACATGTCTTTAAGCTATTGGTTCGTCACATATATTGTATATAAGACAAAGTAAATGAATGAAACATAATTTCATTTTCT CCCAATGATAATAATAATTGAATTGAGTATTATATTTACAGGTATTTCATCCACTCAAGGGTCAAGTGGCTGCAGCCACT TTCCTCCTGATGTGGTTTTCACCGTGCAAGGAGAACCTATTGAAGCTCACAGAGTCATATTAAGTGCAAGGTCACCATAT TTCAAGAAAAAGTTCGAGACTGATTGGAAAGAGCGCAGCGAGGTTAGATTCTCGCGGGAGAAGTTGTCATATCCCGCGCT TTATAGCCTCGTACACTTCTTCTATTCAGACAGGTTGGAGATTGCTGTGGATGACATGGAAGATCTTGTGAGAATATGCA AAGTGTGCAAATGCGAATCACTAAGGAGTGTTCTTGAGAAAGAAATAGTTCATCAAAAGTATGCGGATTATAAAGCTCTG CGAGATGTGGACAATTCTCAGAAACGGTATATTTTGCAGGGCCTGTCCCTTCCTGAAGAAGACAGGCTTCCTGCAGCCTT GCGTCGAATCCTTCTGACCGCCCTTTCAAATTCCAGCCATGAAAATGGTCAAGATGATGGAATTGATAATGCGGTATCTA GGATGGGTGCCATGCAGATGGATGATGATCTTGCTGATGTTTGTGTGAGAGTCGACAGGAAAATTTTCCGTTGCCATAAA GTTATTCTAGCTTCAAGGTCAGAATATTTTAAAGCAAGGCTGTCTCGTATGGAGGATTTCCATGAAGGGAAAGATGCCTT ATCTGTTGACTTCCTTCCTTGTATTGAGGAACATGACTTGAGCACGGAAGCATTTGAGAAAATGATTGAATATATGTAAG TCTCTTCTCTTGACGGCGAAATTTAGAAATTGAAAATATTGCAGGGATTTTATATGACATTAATTAACTAGTGAACTTGA GACCATTTGGCTAATCAGCATCTCTGTGTTATTCTGTAGATTCTGACAGACCTTATTTGTAATGATTGCAATGAAGATAT TCTTTCTTACCCTTCAGATATGTGTTTATATTTGGGGGAAAAGCTTTGCCTATTTACTGTACTAGTAGTTATACTCGTGC AGTGCAAGGGTGCTTAAGCATGATTTGGTGATTCTTTTTTAGTATTAATGATTGTCTATGTCAGGTTGACGAAACTCAGC TAATTGTTCCATGGTAGTAAAATTCTTTTCAAATTGATACATTCTTGAGTACTTTTCTGTTTGTGTGGTTCCAATTTGCA AGATTGAGTAAAACCTATTTAAATTGCCTGTTTATGCATGATTGTTTTTGTAGTAGGTGATTTTTCCTGTTGTTTTATAC TTTTTTGCCCATTTTTAGTTTCTGTAGCATGTTCCTGTCATAATGCCTTCAGCATGATGAAGTTTCTGGGATAATATAAG TGTACCTGTTCATCAATTTTCTGCTGCAAATATGATTTTCGTGAATTTTATTCTGCCTCCTTTGTTGGTTCAGGTACACC GATGCTTTACAGGATATAAATCCAGATCAGGTTTTTTATATCTCTATATAGATTTCTGTAAAAATGGTTTTCTTTCTGTT GTCAAACATTTGATTTATATATTGTTAACAGGCTGAGGAGATGTTGGATGTTGCTTCTAGATACTTACTGTTTCCTCTTA AGCGTGCGGTAGCTGATGTCTTGTTGCCACACTTGGAAATGGTGTCGCCTGAGGAGCTTTGCCACTGGTTAATGCTAGCG GACATGTATTTTTCTTTTCTGCTTGTCTCCCTCCTTCATTTTACATTGATGGCTGCAATTAATGTTGTTTCTTTCTGTAC TCTTGGGGAGGGATAGGGAACGGATTCTTCCTTCACATGTTTATTTTGTTTTCTTATTATGTTTATATAGTTGTCTCAAT GCTTTTTAATACTCATGCTTTAATGATTGTGTTTAAACTTGTATAGACTACACTATGTTAGTCGAGCTTACTACTTGAGT AAGTACTTATTTAAGGTGTTTATCCAAAGAGGTTACTCGAATGTCTACTGGTAATTGATCTCAAGAAGACTTTAGTATTT CCTATTTGATCTAGAATTCAGATGCACAATTAGTTGGATGAGAAATTTAAAAGAGAAGACCAAGGAGGATGCAAGAAAGA TCATCAATATTCTTTGGAAATAATTAATGCACAAGTTTTAGGAAGAATATCACTCTTCCAAAAGAACTGAATAGTTATAG AGGATTTTTTTGGCTTACCCTTAATTCTCTCATCACTGCTCAAATTGACATTAACAAAGTGTTGGACAAGGCGATAATGT TTTTGTTCAATGATTCCCAACTCCTACCTGCAAAGTATTGTAGATCCTGTTGTGGTGAATTACATATGTTCCTTATTTTC CGGCATGATGATTGGTCTTTGTTCTCATTAGTTCATCTAATATGGTACCAGATTATATTCTTGTTTTATCTGTATTTCTA TTTAAAATTTGTTCATATCCAGGTATGGTGTTTTCAAGATTCGGGAATATTGTTTAGACACCGTTGCTTGTAATTTTGAA ACATTTGCTGATACTAAAGAATTCCGGGCAATGCTGTTGACTCTGCCTCCACCATCAGGCGACTCATCTCTTCGTACCAC TGTTCCAAGCATTCCTGGATCTGCTCTAAATACTGATCAAGGAAATCTTCTTGATGATTTACGTGAGAAATGGCTTGAAA TTGAAGCTGCTGAGCTTGACAAGAGAGATGAGAGTGCTTTGCAATTTGACAAGCGCCTAGAAATGCTTATGCTTGTTGCA GAGCAAGAAAAATCATCAGAGAATGCTGATCCAGATGGTATTAATAACTCACACCCTTGGCTATCTCCTCAATCACCACT CTAATTTCAGGTGAACAAAAAGAATTGTAGATTTCTGATCATTTTTTCTTTACTGATAAATTAAAAAAAAAAGATATTAT TGTATAGATTTTGTATGTCATCATGGTTGTAATTTATAGGTAGCTGAATGCTGAGTTAGGTTGCTTGGAGTGCTTAAGTT GGGTTTTTGTAACTTTAGTTACTCGAGCATTCATTGATTCTTAAATTTCTTTTCAATAATTTCTACATAATCTTGACATT GTGATTACTACCTGAATGTGGGCTTGACAACTCAAGCCCATGAGAAGAGCAAAGTTGAAATATCTATAAAATATCTTAGA ATATTATTTCTGTATCTTAGAATATTTAGATTATCTTTAATGATCTCTTAGGAGTGGTTTCCATATATCATTATGCTTCC TGATTAGTTTACTTATTTGATTATGATAAGGCTTAGGATTCCAAAAATTAATATAATGTTTTATACTTTTTACCGCATTA TATCACATCTAGCCACAGCACTATACAT
CDS sequence (LotjaGi6g1v0023500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGGTTCATCGACCACGGCATGGACCTCGACCTGGACCTGGACCTTGACCTCTCTGATTTCGGTTCGTCGGTGCCGCT CAAGAAGGTCCCTAACGGCGACATCTTCTCCGCGTCCCGTGCGGGTGACGTGGACCGCCTCCGGTACCTTCTCGAGTCCG GCGTCGACGTCAACGCCCGCGACCAGTGGGACTCCGTCGCCCTCTACTACGCTTGCCTCGCCGGCCACCTCGACGCCGCC CGCATGCTCCTCGAGAGCGGCGCCATCTGCTCCGAACACACTTTCGACGGTGACCGTTGCCACTACGCCGCTCTCAACTT GAAGGTCCGTAAACTCCTCAAGGCCTTTGAAGCTCGCCCTCCTCCCTTGGACCCCTTGCCCTCCTCCTTGCGTCTCACCT TCTTGTCCTGCCCCGCTAACTCCTCTGCCTCTCCATTTCCCAGTATTTCATCCACTCAAGGGTCAAGTGGCTGCAGCCAC TTTCCTCCTGATGTGGTTTTCACCGTGCAAGGAGAACCTATTGAAGCTCACAGAGTCATATTAAGTGCAAGGTCACCATA TTTCAAGAAAAAGTTCGAGACTGATTGGAAAGAGCGCAGCGAGGTTAGATTCTCGCGGGAGAAGTTGTCATATCCCGCGC TTTATAGCCTCGTACACTTCTTCTATTCAGACAGGTTGGAGATTGCTGTGGATGACATGGAAGATCTTGTGAGAATATGC AAAGTGTGCAAATGCGAATCACTAAGGAGTGTTCTTGAGAAAGAAATAGTTCATCAAAAGTATGCGGATTATAAAGCTCT GCGAGATGTGGACAATTCTCAGAAACGGTATATTTTGCAGGGCCTGTCCCTTCCTGAAGAAGACAGGCTTCCTGCAGCCT TGCGTCGAATCCTTCTGACCGCCCTTTCAAATTCCAGCCATGAAAATGGTCAAGATGATGGAATTGATAATGCGGTATCT AGGATGGGTGCCATGCAGATGGATGATGATCTTGCTGATGTTTGTGTGAGAGTCGACAGGAAAATTTTCCGTTGCCATAA AGTTATTCTAGCTTCAAGGTCAGAATATTTTAAAGCAAGGCTGTCTCGTATGGAGGATTTCCATGAAGGGAAAGATGCCT TATCTGTTGACTTCCTTCCTTGTATTGAGGAACATGACTTGAGCACGGAAGCATTTGAGAAAATGATTGAATATATGTAC ACCGATGCTTTACAGGATATAAATCCAGATCAGGCTGAGGAGATGTTGGATGTTGCTTCTAGATACTTACTGTTTCCTCT TAAGCGTGCGGTAGCTGATGTCTTGTTGCCACACTTGGAAATGGTGTCGCCTGAGGAGCTTTGCCACTGGTTAATGCTAG CGGACATGTATGGTGTTTTCAAGATTCGGGAATATTGTTTAGACACCGTTGCTTGTAATTTTGAAACATTTGCTGATACT AAAGAATTCCGGGCAATGCTGTTGACTCTGCCTCCACCATCAGGCGACTCATCTCTTCGTACCACTGTTCCAAGCATTCC TGGATCTGCTCTAAATACTGATCAAGGAAATCTTCTTGATGATTTACGTGAGAAATGGCTTGAAATTGAAGCTGCTGAGC TTGACAAGAGAGATGAGAGTGCTTTGCAATTTGACAAGCGCCTAGAAATGCTTATGCTTGTTGCAGAGCAAGAAAAATCA TCAGAGAATGCTGATCCAGATGGTATTAATAACTCACACCCTTGGCTATCTCCTCAATCACCACTCTAA
Protein sequence (LotjaGi6g1v0023500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRFIDHGMDLDLDLDLDLSDFGSSVPLKKVPNGDIFSASRAGDVDRLRYLLESGVDVNARDQWDSVALYYACLAGHLDAA RMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLDPLPSSLRLTFLSCPANSSASPFPSISSTQGSSGCSH FPPDVVFTVQGEPIEAHRVILSARSPYFKKKFETDWKERSEVRFSREKLSYPALYSLVHFFYSDRLEIAVDDMEDLVRIC KVCKCESLRSVLEKEIVHQKYADYKALRDVDNSQKRYILQGLSLPEEDRLPAALRRILLTALSNSSHENGQDDGIDNAVS RMGAMQMDDDLADVCVRVDRKIFRCHKVILASRSEYFKARLSRMEDFHEGKDALSVDFLPCIEEHDLSTEAFEKMIEYMY TDALQDINPDQAEEMLDVASRYLLFPLKRAVADVLLPHLEMVSPEELCHWLMLADMYGVFKIREYCLDTVACNFETFADT KEFRAMLLTLPPPSGDSSLRTTVPSIPGSALNTDQGNLLDDLREKWLEIEAAELDKRDESALQFDKRLEMLMLVAEQEKS SENADPDGINNSHPWLSPQSPL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 555 | 549 | 5.2E-219 | – | |
| Gene3D | 32 | 131 | 100 | 5.6E-14 | ||
| Pfam | 35 | 84 | 50 | 1.8E-8 | – | |
| SUPERFAMILY | 36 | 114 | 79 | 2.49E-13 | ||
| ProSiteProfiles | 38 | 62 | 25 | 9.11 | ||
| ProSiteProfiles | 38 | 88 | 51 | 15.247 | ||
| Gene3D | 144 | 278 | 135 | 1.2E-20 | – | |
| SUPERFAMILY | 145 | 257 | 113 | 1.88E-19 | ||
| CDD | 161 | 255 | 95 | 2.11258E-36 | – | |
| Pfam | 162 | 259 | 98 | 8.8E-17 | ||
| SMART | 163 | 260 | 98 | 7.0E-14 | ||
| ProSiteProfiles | 163 | 230 | 68 | 18.079 | ||
| SUPERFAMILY | 317 | 438 | 122 | 4.71E-22 | ||
| Gene3D | 319 | 481 | 163 | 1.7E-29 | – | |
| Pfam | 329 | 435 | 107 | 9.7E-17 | ||
| CDD | 331 | 422 | 92 | 3.03096E-21 | – | |
| SMART | 332 | 439 | 108 | 8.6E-16 | ||
| ProSiteProfiles | 332 | 408 | 77 | 15.246 | ||
| CDD | 443 | 486 | 44 | 0.00248711 | – | |
| MobiDBLite | 557 | 582 | 26 | - | – | |
| MobiDBLite | 564 | 582 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0023500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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