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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0023500 |
| Transcript ID | LotjaGi6g1v0023500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat and BTB/POZ domain protein; TAIR: AT2G04740.1 ankyrin repeat family protein; Swiss-Prot: sp|Q9SJ85|Y2474_ARATH BTB/POZ domain-containing protein At2g04740; TrEMBL-Plants: tr|A0A151R0P2|A0A151R0P2_CAJCA Ankyrin repeat and BTB/POZ domain-containing protein 1; Found in the gene: LotjaGi6g1v0023500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:4358930..4363303) extracted from Lotus japonicus Gifu genome v1.2.
AAAATGCGGTTCATCGACCACGGCATGGACCTCGACCTGGACCTGGACCTTGACCTCTCTGATTTCGGTTCGTCGGTGCC GCTCAAGAAGGTCCCTAACGGCGACATCTTCTCCGCGTCCCGTGCGGGTGACGTGGACCGCCTCCGGTACCTTCTCGAGT CCGGCGTCGACGTCAACGCCCGCGACCAGTGGGACTCCGTCGCCCTCTACTACGCTTGCCTCGCCGGCCACCTCGACGCC GCCCGCATGCTCCTCGAGAGCGGCGCCATCTGCTCCGAACACACTTTCGACGGTGACCGTTGCCACTACGCCGCTCTCAA CTTGAAGGTCCGTAAACTCCTCAAGGCCTTTGAAGCTCGCCCTCCTCCCTTGGACCCCTTGCCCTCCTCCTTGCGTCTCA CCTTCTTGTCCTGCCCCGCTAACTCCTCTGCCTCTCCATTTCCCAGTATGATCCTAACTCTTTCGGTTAGTTAGTTAGTT ATTACTGTTGAGTTTTCAGTTATGACAGTTATGATTTCGTTACATTCTGTTTTTCAGTTTTGTTTATCGCAGTTTAGTTT CTGTTAGTTAGTTAGTTAAATTACATTCTGCTTTTCAGTTTTGTTTATCTTTTTCATTGTTAAACCATTCATGTGATTAA GTTTTCAGGATAGTAAGTGTCTGTTTGGTTTTCAGTTAGGAAGTCTGTTTGAAGCATTGGAATTCGAAATCGCGATTTCC AATGCACATTCAACCAACGGAATGCACTTGTTGGGTTGAGTGAATGTGCTTTCACATTCACCCAATTGAAAACCAAACAG GCTCTTAGTTCATGATATGGTATCAGTGTCTCCATGATTGGCGGTCTGGAGTTCGATCATGGCCTAAATTACTCTTGTAA ATAGTTAAATTTCAGATGGGCATTGTCCTTTCTAGAGCCAATTTGGCATTTAGTGACGAAGCTTGTACTAGGGCTTCCAT ACGTACTAAGACCAATGGGATCTTGTGAGAAGCGTGTTAGAAATATAATATGAAATCGTTCACGTGTAGACCCAAGGGAT TGAGCTTTCAGGATAGTTAGTTCATGATATGGTATGGTATCAGAGTTTCCATGACTGGTAGTCTAGAGTTCGATCATTGC CTTGATTAGTCTTGTAAATAGTTAAATTTTTAGCACGAGTAGGTGAGGGCGTGCATTGTCCTTGCAAGAGCCAATTTGGC ATCTAGTGACGAAGCTTGTACTAAGGCTTCCAAACATACTAAGAGAATCTCCAATGCTTGGTACCTTTGTTGGTATCTTA TCACTCTTTTTGTGGGCCTGAAATGCCACATAGGATATTAGGTACCCATAAGGCACTGATGCACATTTTGCTCCAACGCA AGGAAATTTAAGATATGGGATCTGAAGATAAGATCCAGCCCTAAGGTACTGCATTGGAGATGCTCTAAGACCAATGGATC TTATGTGAGGGGTGTGTTAAAACTATAATATAAAATCATTCACATGTCTTTAAGCTATTGGTTCGTCACATATATTGTAT ATAAGACAAAGTAAATGAATGAAACATAATTTCATTTTCTCCCAATGATAATAATAATTGAATTGAGTATTATATTTACA GGTATTTCATCCACTCAAGGGTCAAGTGGCTGCAGCCACTTTCCTCCTGATGTGGTTTTCACCGTGCAAGGAGAACCTAT TGAAGCTCACAGAGTCATATTAAGTGCAAGGTCACCATATTTCAAGAAAAAGTTCGAGACTGATTGGAAAGAGCGCAGCG AGGTTAGATTCTCGCGGGAGAAGTTGTCATATCCCGCGCTTTATAGCCTCGTACACTTCTTCTATTCAGACAGGTTGGAG ATTGCTGTGGATGACATGGAAGATCTTGTGAGAATATGCAAAGTGTGCAAATGCGAATCACTAAGGAGTGTTCTTGAGAA AGAAATAGTTCATCAAAAGTATGCGGATTATAAAGCTCTGCGAGATGTGGACAATTCTCAGAAACGGTATATTTTGCAGG GCCTGTCCCTTCCTGAAGAAGACAGGCTTCCTGCAGCCTTGCGTCGAATCCTTCTGACCGCCCTTTCAAATTCCAGCCAT GAAAATGGTCAAGATGATGGAATTGATAATGCGGTATCTAGGATGGGTGCCATGCAGATGGATGATGATCTTGCTGATGT TTGTGTGAGAGTCGACAGGAAAATTTTCCGTTGCCATAAAGTTATTCTAGCTTCAAGGTCAGAATATTTTAAAGCAAGGC TGTCTCGTATGGAGGATTTCCATGAAGGGAAAGATGCCTTATCTGTTGACTTCCTTCCTTGTATTGAGGAACATGACTTG AGCACGGAAGCATTTGAGAAAATGATTGAATATATGTAAGTCTCTTCTCTTGACGGCGAAATTTAGAAATTGAAAATATT GCAGGGATTTTATATGACATTAATTAACTAGTGAACTTGAGACCATTTGGCTAATCAGCATCTCTGTGTTATTCTGTAGA TTCTGACAGACCTTATTTGTAATGATTGCAATGAAGATATTCTTTCTTACCCTTCAGATATGTGTTTATATTTGGGGGAA AAGCTTTGCCTATTTACTGTACTAGTAGTTATACTCGTGCAGTGCAAGGGTGCTTAAGCATGATTTGGTGATTCTTTTTT AGTATTAATGATTGTCTATGTCAGGTTGACGAAACTCAGCTAATTGTTCCATGGTAGTAAAATTCTTTTCAAATTGATAC ATTCTTGAGTACTTTTCTGTTTGTGTGGTTCCAATTTGCAAGATTGAGTAAAACCTATTTAAATTGCCTGTTTATGCATG ATTGTTTTTGTAGTAGGTGATTTTTCCTGTTGTTTTATACTTTTTTGCCCATTTTTAGTTTCTGTAGCATGTTCCTGTCA TAATGCCTTCAGCATGATGAAGTTTCTGGGATAATATAAGTGTACCTGTTCATCAATTTTCTGCTGCAAATATGATTTTC GTGAATTTTATTCTGCCTCCTTTGTTGGTTCAGGTACACCGATGCTTTACAGGATATAAATCCAGATCAGGTTTTTTATA TCTCTATATAGATTTCTGTAAAAATGGTTTTCTTTCTGTTGTCAAACATTTGATTTATATATTGTTAACAGGCTGAGGAG ATGTTGGATGTTGCTTCTAGATACTTACTGTTTCCTCTTAAGCGTGCGGTAGCTGATGTCTTGTTGCCACACTTGGAAAT GGTGTCGCCTGAGGAGCTTTGCCACTGGTTAATGCTAGCGGACATGTATTTTTCTTTTCTGCTTGTCTCCCTCCTTCATT TTACATTGATGGCTGCAATTAATGTTGTTTCTTTCTGTACTCTTGGGGAGGGATAGGGAACGGATTCTTCCTTCACATGT TTATTTTGTTTTCTTATTATGTTTATATAGTTGTCTCAATGCTTTTTAATACTCATGCTTTAATGATTGTGTTTAAACTT GTATAGACTACACTATGTTAGTCGAGCTTACTACTTGAGTAAGTACTTATTTAAGGTGTTTATCCAAAGAGGTTACTCGA ATGTCTACTGGTAATTGATCTCAAGAAGACTTTAGTATTTCCTATTTGATCTAGAATTCAGATGCACAATTAGTTGGATG AGAAATTTAAAAGAGAAGACCAAGGAGGATGCAAGAAAGATCATCAATATTCTTTGGAAATAATTAATGCACAAGTTTTA GGAAGAATATCACTCTTCCAAAAGAACTGAATAGTTATAGAGGATTTTTTTGGCTTACCCTTAATTCTCTCATCACTGCT CAAATTGACATTAACAAAGTGTTGGACAAGGCGATAATGTTTTTGTTCAATGATTCCCAACTCCTACCTGCAAAGTATTG TAGATCCTGTTGTGGTGAATTACATATGTTCCTTATTTTCCGGCATGATGATTGGTCTTTGTTCTCATTAGTTCATCTAA TATGGTACCAGATTATATTCTTGTTTTATCTGTATTTCTATTTAAAATTTGTTCATATCCAGGTATGGTGTTTTCAAGAT TCGGGAATATTGTTTAGACACCGTTGCTTGTAATTTTGAAACATTTGCTGATACTAAAGAATTCCGGGCAATGCTGTTGA CTCTGCCTCCACCATCAGGCGACTCATCTCTTCGTACCACTGTTCCAAGCATTCCTGGATCTGCTCTAAATACTGATCAA GGAAATCTTCTTGATGATTTACGTGAGAAATGGCTTGAAATTGAAGCTGCTGAGCTTGACAAGAGAGATGAGAGTGCTTT GCAATTTGACAAGCGCCTAGAAATGCTTATGCTTGTTGCAGAGCAAGAAAAATCATCAGAGAATGCTGATCCAGATGGTA TTAATAACTCACACCCTTGGCTATCTCCTCAATCACCACTCTAATTTCAGGTGA
CDS sequence (LotjaGi6g1v0023500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGGTTCATCGACCACGGCATGGACCTCGACCTGGACCTGGACCTTGACCTCTCTGATTTCGGTTCGTCGGTGCCGCT CAAGAAGGTCCCTAACGGCGACATCTTCTCCGCGTCCCGTGCGGGTGACGTGGACCGCCTCCGGTACCTTCTCGAGTCCG GCGTCGACGTCAACGCCCGCGACCAGTGGGACTCCGTCGCCCTCTACTACGCTTGCCTCGCCGGCCACCTCGACGCCGCC CGCATGCTCCTCGAGAGCGGCGCCATCTGCTCCGAACACACTTTCGACGGTGACCGTTGCCACTACGCCGCTCTCAACTT GAAGGTCCGTAAACTCCTCAAGGCCTTTGAAGCTCGCCCTCCTCCCTTGGACCCCTTGCCCTCCTCCTTGCGTCTCACCT TCTTGTCCTGTATTTCATCCACTCAAGGGTCAAGTGGCTGCAGCCACTTTCCTCCTGATGTGGTTTTCACCGTGCAAGGA GAACCTATTGAAGCTCACAGAGTCATATTAAGTGCAAGGTCACCATATTTCAAGAAAAAGTTCGAGACTGATTGGAAAGA GCGCAGCGAGGTTAGATTCTCGCGGGAGAAGTTGTCATATCCCGCGCTTTATAGCCTCGTACACTTCTTCTATTCAGACA GGTTGGAGATTGCTGTGGATGACATGGAAGATCTTGTGAGAATATGCAAAGTGTGCAAATGCGAATCACTAAGGAGTGTT CTTGAGAAAGAAATAGTTCATCAAAAGTATGCGGATTATAAAGCTCTGCGAGATGTGGACAATTCTCAGAAACGGTATAT TTTGCAGGGCCTGTCCCTTCCTGAAGAAGACAGGCTTCCTGCAGCCTTGCGTCGAATCCTTCTGACCGCCCTTTCAAATT CCAGCCATGAAAATGGTCAAGATGATGGAATTGATAATGCGGTATCTAGGATGGGTGCCATGCAGATGGATGATGATCTT GCTGATGTTTGTGTGAGAGTCGACAGGAAAATTTTCCGTTGCCATAAAGTTATTCTAGCTTCAAGGTCAGAATATTTTAA AGCAAGGCTGTCTCGTATGGAGGATTTCCATGAAGGGAAAGATGCCTTATCTGTTGACTTCCTTCCTTGTATTGAGGAAC ATGACTTGAGCACGGAAGCATTTGAGAAAATGATTGAATATATGTACACCGATGCTTTACAGGATATAAATCCAGATCAG GCTGAGGAGATGTTGGATGTTGCTTCTAGATACTTACTGTTTCCTCTTAAGCGTGCGGTAGCTGATGTCTTGTTGCCACA CTTGGAAATGGTGTCGCCTGAGGAGCTTTGCCACTGGTTAATGCTAGCGGACATGTATGGTGTTTTCAAGATTCGGGAAT ATTGTTTAGACACCGTTGCTTGTAATTTTGAAACATTTGCTGATACTAAAGAATTCCGGGCAATGCTGTTGACTCTGCCT CCACCATCAGGCGACTCATCTCTTCGTACCACTGTTCCAAGCATTCCTGGATCTGCTCTAAATACTGATCAAGGAAATCT TCTTGATGATTTACGTGAGAAATGGCTTGAAATTGAAGCTGCTGAGCTTGACAAGAGAGATGAGAGTGCTTTGCAATTTG ACAAGCGCCTAGAAATGCTTATGCTTGTTGCAGAGCAAGAAAAATCATCAGAGAATGCTGATCCAGATGGTATTAATAAC TCACACCCTTGGCTATCTCCTCAATCACCACTCTAA
Protein sequence (LotjaGi6g1v0023500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRFIDHGMDLDLDLDLDLSDFGSSVPLKKVPNGDIFSASRAGDVDRLRYLLESGVDVNARDQWDSVALYYACLAGHLDAA RMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLDPLPSSLRLTFLSCISSTQGSSGCSHFPPDVVFTVQG EPIEAHRVILSARSPYFKKKFETDWKERSEVRFSREKLSYPALYSLVHFFYSDRLEIAVDDMEDLVRICKVCKCESLRSV LEKEIVHQKYADYKALRDVDNSQKRYILQGLSLPEEDRLPAALRRILLTALSNSSHENGQDDGIDNAVSRMGAMQMDDDL ADVCVRVDRKIFRCHKVILASRSEYFKARLSRMEDFHEGKDALSVDFLPCIEEHDLSTEAFEKMIEYMYTDALQDINPDQ AEEMLDVASRYLLFPLKRAVADVLLPHLEMVSPEELCHWLMLADMYGVFKIREYCLDTVACNFETFADTKEFRAMLLTLP PPSGDSSLRTTVPSIPGSALNTDQGNLLDDLREKWLEIEAAELDKRDESALQFDKRLEMLMLVAEQEKSSENADPDGINN SHPWLSPQSPL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 544 | 538 | 1.8E-216 | – | |
| Gene3D | 32 | 128 | 97 | 5.4E-14 | ||
| Pfam | 35 | 84 | 50 | 1.7E-8 | – | |
| SUPERFAMILY | 36 | 114 | 79 | 2.3E-13 | ||
| ProSiteProfiles | 38 | 88 | 51 | 15.247 | ||
| ProSiteProfiles | 38 | 62 | 25 | 9.11 | ||
| Gene3D | 129 | 267 | 139 | 9.0E-21 | – | |
| SUPERFAMILY | 143 | 246 | 104 | 3.26E-19 | ||
| CDD | 150 | 244 | 95 | 3.98306E-36 | – | |
| Pfam | 151 | 248 | 98 | 8.5E-17 | ||
| SMART | 152 | 249 | 98 | 7.0E-14 | ||
| ProSiteProfiles | 152 | 219 | 68 | 18.079 | ||
| SUPERFAMILY | 306 | 427 | 122 | 4.71E-22 | ||
| Gene3D | 308 | 470 | 163 | 1.7E-29 | – | |
| Pfam | 318 | 424 | 107 | 9.3E-17 | ||
| CDD | 320 | 411 | 92 | 3.46271E-21 | – | |
| SMART | 321 | 428 | 108 | 8.6E-16 | ||
| ProSiteProfiles | 321 | 397 | 77 | 15.246 | ||
| CDD | 432 | 475 | 44 | 0.00280046 | – | |
| MobiDBLite | 546 | 571 | 26 | - | – | |
| MobiDBLite | 553 | 571 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0023500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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