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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0031700 |
Transcript ID | LotjaGi6g1v0031700.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Receptor-kinase, putative; TAIR: AT3G47580.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q1MX30|XA21_ORYSI Receptor kinase-like protein Xa21; TrEMBL-Plants: tr|K7KE24|K7KE24_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0031700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:5976388..5978043) extracted from Lotus japonicus Gifu genome v1.2.
AGAAGTACCAACAAAAGGTGTCTTTCAGAAAGCAAGCGCGTTAGCGGGGACCGGAAACAAAAGGCTATGTGGAGGTATTT CAAAGTTGCATCTATTGCCATGCCCTGTCAAAGATATAAAACCTGCAAAACACCATAATTTGAAGCTGATAGGAGCGGCA GTTAGTGTGGTTGCTTTTCTTCTCATTCTGTCATTTATCCTAACCATCTACTGGATGAGGAAAAAATTTAACAAACCATC TTCGGATTCACCAACAATTGACCAACTAGCTAAGATTTCATACCAAGACCTACATCATGGAACTGATGGGTTCTCAGCCA AAAATTTGATTGGATCAGGAAGTTTTGGTTCTGTGTACAAAGGAAATATTGCGCCAGAAGATAAAGATGTTGCCATAAAG GTCTTGAACCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTAAAAAATATCAGACATCGGAA TTTGGTTAAGATTTTAACATGTTGTTCCAGCACAGACTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTTAGTACATGG AAAATGGAAGCTTAGAACAGTGGCGTCATCCCGGGAGTGGAGGTGTAGAGCTTTTTGAGCCTCCGGATCTTCAACAAAGA TTAAGTATCATTATTGATGTTGCTTCTGCATTAAATTATCTTCATCATGAGTGTGAGCCATTGGTCCTTCACTGTGATCT AAAGCCGAATAATGTCCTTCTTGACAATGACATGGTCGCTTATGTGAGTGATTTTGGCATAGCAAGACTTGTTTCAACTG TTGATGGTTCTCATATGCAAACTAGTACAATTGGAATAAAGGGGACTATTGGTTATGCTCCACCAGGTATTTTTTATACT CATCAATAATTGTTTATTCAAATTCTCCTATGTTTGGGTGTAAACTTGATATCTTACTTGACATAGAGTATTTACATTTT TTTGCAAAATATATTTTAGAGTATGGAGTGGGTTCTGAAGTGTCCACATATGGCGACATTTATAGCTTCAGAATTCTTGT ATTGGAAATGCTTACCGGAAAAAGACCTACAGATGAATTGTTTGAAGACGGTCAAAATCTGCATAAGTTTGTGGAAATTT CATTTCCTAAAAATCTTTTACAAATTTTGGACCCACAACTTGTATCAAGAGATGAAGAAGCAACAGTTGGAGAAAATAGA TGGAATCTTATCCCATATGCTGAGCAGTGCTTAATTTCACTTTTTGGGATTGGGCTTGCTTGTTCAATGGAACTACCAAA AGAAAGGATGGACATGATGAGTGTCCTCAGACAGCTACACATTATCAGAAAGGCCTTCCTTGCTGGTGAGATCAATTGAG AATTTTAGATGTTTAATTGCATAATATTGTCACATTAGCTTTTAACTAATTAATTTTATATGTATTATTAATTTTTTCTA TATATATATTTTTTTTAAACTTCGAAAGTAATAGGCGTATTCTCCAATTTCAGATGTTCCTGTTCGAACGTGAGTAATTA AAGCTGAAATCAAATGTTGTAGTCATTTGAGATAGAGATGTGTGTATGCAACATAATGCTCTGTAACTTGAGTTCAACCT TTGGACTTATGAGTTATGTCCATTTGCACTTGAGTTATGTCCATCTTTCATGTAAC
CDS sequence (LotjaGi6g1v0031700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAATGGAAGCTTAGAACAGTGGCGTCATCCCGGGAGTGGAGGTGTAGAGCTTTTTGAGCCTCCGGATCTTCAACA AAGATTAAGTATCATTATTGATGTTGCTTCTGCATTAAATTATCTTCATCATGAGTGTGAGCCATTGGTCCTTCACTGTG ATCTAAAGCCGAATAATGTCCTTCTTGACAATGACATGGTCGCTTATGTGAGTGATTTTGGCATAGCAAGACTTGTTTCA ACTGTTGATGGTTCTCATATGCAAACTAGTACAATTGGAATAAAGGGGACTATTGGTTATGCTCCACCAGAGTATGGAGT GGGTTCTGAAGTGTCCACATATGGCGACATTTATAGCTTCAGAATTCTTGTATTGGAAATGCTTACCGGAAAAAGACCTA CAGATGAATTGTTTGAAGACGGTCAAAATCTGCATAAGTTTGTGGAAATTTCATTTCCTAAAAATCTTTTACAAATTTTG GACCCACAACTTGTATCAAGAGATGAAGAAGCAACAGTTGGAGAAAATAGATGGAATCTTATCCCATATGCTGAGCAGTG CTTAATTTCACTTTTTGGGATTGGGCTTGCTTGTTCAATGGAACTACCAAAAGAAAGGATGGACATGATGAGTGTCCTCA GACAGCTACACATTATCAGAAAGGCCTTCCTTGCTGATGTTCCTGTTCGAACGTGA
Protein sequence (LotjaGi6g1v0031700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENGSLEQWRHPGSGGVELFEPPDLQQRLSIIIDVASALNYLHHECEPLVLHCDLKPNNVLLDNDMVAYVSDFGIARLVS TVDGSHMQTSTIGIKGTIGYAPPEYGVGSEVSTYGDIYSFRILVLEMLTGKRPTDELFEDGQNLHKFVEISFPKNLLQIL DPQLVSRDEEATVGENRWNLIPYAEQCLISLFGIGLACSMELPKERMDMMSVLRQLHIIRKAFLADVPVRT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 226 | 226 | 9.2E-110 | – | |
PANTHER | 1 | 226 | 226 | 9.2E-110 | – | |
Gene3D | 1 | 226 | 226 | 5.1E-53 | – | |
SMART | 1 | 224 | 224 | 1.6E-4 | ||
ProSiteProfiles | 1 | 224 | 224 | 21.884 | ||
SUPERFAMILY | 1 | 218 | 218 | 7.59E-41 | ||
Pfam | 30 | 149 | 120 | 1.7E-20 | ||
ProSitePatterns | 50 | 62 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0031700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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