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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0032700 |
| Transcript ID | LotjaGi6g1v0032700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lung seven transmembrane receptor family protein; TAIR: AT5G42090.1 Lung seven transmembrane receptor family protein; Swiss-Prot: sp|Q8BUV8|GP107_MOUSE Protein GPR107; TrEMBL-Plants: tr|A0A151R1T1|A0A151R1T1_CAJCA Protein GPR107 family; Found in the gene: LotjaGi6g1v0032700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:6126826..6132622) extracted from Lotus japonicus Gifu genome v1.2.
CCAATACGTCAACTGTTGATAATCGAATGTAGTTAAAAAAATCTATACCCACTTAACAACCCAACTCAACCTAAATGTAT TGGGTTCGGATCGAATTGGTCGGACACCTCTAGAAGCCCCACCTTCAGCTTATTTAGGATAAATAAGTTTTTTTATTTTG TCGGAGCTAGGCTTTCTTGCAACATTTTATTTACTATTTAGTGATATATGCTGACAATTTCAAGCGTGTCTGGTTTGGTA GTGCGCATTTCGATTGTGATTGTGGGTCTTTCCCTTTGCCGACTCGCTTACGCTAGGTAGCTAGCTCCTTCCTGCGTAAT TAGAAACAAACACAACAAGTAAAGTCTCTCACCCAGATTCAGATCTGCAAAAAAGGCTTCATTCATTTACTCACTCACTC ACACATCGAGGACGGTGATGATGATGATGGAGCCTCCTCCACGCTCCTTCTTCCTCCTCCTCCTCCTCCTCCCCCTCCCA ACCCTCTCCGAGATCCGCTCCTCCTTCATGCGCAACGACGACCACCCCATCGTCCCCTTCGACCAATTCGGTTTCACCCA CAAAGGCCGCCTCGAACTCAACGTCTCCAAGATCTCCCTCTCCAACTCCAATCTCGACCTCTCCAAAGTCGGCTTCTTCC TCTCCACTCTCGACTCATGGCTTCACGTCCTCCAACAACTCGAAGACGGCGAGATCCGCTGCGCTCTCCAATCCGACCTC GTCAAATCCGTCTTCACCTTCAACTCCCTCAACGGCCGCGACTCCTTCTCCACCGTCTACTCCCAAACCGACGCCGATCA GTACAATCTCGTCTTCGCCAATTGCCACCCTCAACAGCTCAAAATCACCATGGATGTCCGATCCGCCATGTACAATCTCG ACGGCAGATCCAACCAACGCGACTACCTCTCCGCCGGGAGAACCGTGCTTCCTAGGGTTTACTTTCTCTTATCGCTCATC TACTTCGCCCTCGCCGCCGTCTGGATCAGTGTTCTCTACAAGAAACGGTTAACCGTTTTCCGAATCCATTACTTCATGCT CGCGGTTATCATCATGAAAGCGTTGAATCTGCTTTGTGAAGCGGAGGATAAATCGTACATCAAGCGCACCGGAACCGCGC ATGGTTGGGATATTCTCTTCTACATCTTCAGTTTTCTCAAGGGGATCTCGCTTTTCACTTTGATTGTGTTGATTGGAACT GGATGGTCTTTTCTCAAACCCTTTCTTCAGGATAAGGAGAAGAAGGTTCTCATGATTGTGATTCCGCTTCAGGTTGTTGC TAACATTGCTCAGGTGGTGATTGATGAGAGTGGACCTTATGGTCATGATTGGGTTACTTGGAAACAGGTTTTCCTCCTTG TGGATGTTGTTTGTTGCTGCGCCGTGCTCTTTCCGATTGTCTGGTCTATTAAGAATCTCCGCGAGGCTGCGAGAACCGAC GGGAAAGCTGCGGTTAATTTGATGAAATTGACGCTGTTTAGGCACTACTATGTTGTGGTTATTTGCTACATTTACTTCAC TAGGGTTGTGGTTTATGCTTTGGAGACGATAACGTCGTATCCTTATTCGTGGACTAGCGTGGTTGCTGCGGAGCTGGCCA CGCTGGCTTTCTATGTGTTTACGGGTTACAAGTTCAAGCCGGAGGCTCATAATCCTTATTTTGTGATCGACGAAGAGGAG GAGGCCGCCGCAGAGGCTTTGAAGCTTGAGGATGAGTTTGAATTGTGATTTTGCGCTTGAAGAAAAAGGTTTTGCAAAAA AAGTAGAGGATGATGATGGTTGAATTGAATTATGGAAGGCATTATTATTGATATGCTGCTCTCTCAGCAATGTTCAGGTT TCATCTCAACATCAGCTAGGAATTTTCATGTTACATTTTGTGATCTGTATACTGCATTTAGTATTCATAAACCCCTGTGC TATATTTTTCTGTGTTCTGGACTATTTGCCAGTTATTATTTGAACTAGTGTCATAATATCATATAGACTCTTGTGTAGTT CTGTGAACCATGTATTTACTTCTAAGTGTTGATACTAATACCTTGCTGTCGTTTACAGCTTCTTTACTGTTTTTGGCACA ATGGCTTTTGTTCTAGCTATCTGTCTGCTTTAAATTTCTGTTGCTGCACATTTATGAAGTTGAATTGAAGTTTGTCCATC AATTACCACTAGAAATTTATAGCTTTTAGAAACATTTATAGTATGTTAATTTAAATTTTCCAACCAAATTCTTATTTGGC ATAGATTAAATGCTGAAATGTCATTGTATGTAATATTCAAACATGGGGTAGTGATTGTGCAATTCTGTCAGAACAGAGGA AAATTTTAATCTTAGATGTCCTAGCTCCTGGGTTTGACTCATGGGAGCCAGCCGGTGTTGTGAGATAAATTACTGGAACA TCTGTCTCATAAGTCATAACCCTCCTCAACCCCAAATTCAAGGCCTTGTTCTGATCAGGCTGAGTGCAGCGACACTGCAA GTCTGTTTCATAGAAAGAGGATTGGAGCAGCACGAGAATGTGACAAACCATAGCTCTTATGCCTCCATTTCTTAGCTGCT TTTTACTCAACCAAACTCTCATCCCAAGTCGTCGCAAACTTCTTTCTGTTAATTTCCATTCAAAGCTTCTCCATTAATTT GCTAGAAACCACCATTAATGATTCAGCCCATGAGACCTTGTCTCTGCATTTTCCTTGCAATTTATAACTGTGAATGATAA GCAAGATTGAAGAAAAGAGACTAGATTGTCGGGTGAAGCAGCTGAAGGATTTGGACAAATCTCATGCTTGGACCTCAGAA TCAGAGACCACTTTGGTTGGATCCTTCTAAAATTTATCTTCTTTGGTGATTCCTTTGCGATGAATCTTAAGTTTTCTTTG TATGGATTCTCTTATTTTCCTTGATTGAAATATATTCTATTCTATTTGATCGAGGCTAGTTGGCATTTGTTGAACATGGT TATGTCCACTTTCACACTGTATTGTTTTATCTTTGAGTAACATGAATAATTTGTTTGGAGTAATATCCATATTTTATTAT AGTTTTTGAATTGTTTCCTTATTTAACTAGGATAAGAAATCCAATATATTAGGATTAGGAATCCAATATGAGTAAGTAGG AGTTAATGCTTTGTATTTGTATATATGAAGCATGATACAAACCTGAAAACCTAACAAAATATAAGATACCATGACATACC AAAATAGGCCTAATTGCACATTTGATCTCTCGTCCGTACCTTTTTCACGATTTTTGGTCCCCAACAAAAATTAATACTAT TTCGCATCCCTAACAAAAGTCTCTGTTTGCATGAATGGTTTTCCGCATCAATTCCATCCAAAAAGTAATGGAATAATTTT TTAATTAAACAATGTTTTACTTGTTGCTATTTTGGTCTCATCCACGTGGTAGGACCATGAATGATAATTTCGTCTAGTTA AGAGTGCAGAAACCAAAGTAGCACCAGGATTTTCATTGGCATGAACAGATTAAAGGGAGATTAAAGGAAATTATTAAAAA ATTGCAAAACTAGAAGTGCCATAATCAAGAATTGATTGGCGAAGACCATAAATGATTGACAAAGCAATCTTGTGAGGAGA ACTTAGAAATCAAATAATCCACAGTGAATCAGCGAGAGGTACCATTGAATCGATCGCAACAAAAACCCTAAGTCCCTAAT TTCACTAAGAACACCACTTCCCCTATTCCTACTATCACTTTTCTCTTCCGATCCTCCATTTCCAATCCAACGACCTGCAT AACCGAGGGACAGGGAGGGGACGCATGAATCATAAAGCAAAACCCAGAAGCTAAATATAGAAACCCCAACCCAGAACCCA AGCCCTCCAACACTCCCTCTACAACAGAAAAGGAAGAGACTTTGACTGAGATGGAGGTCGATCTCGATGAAAAATCCCCT TAATGAGGACGTTCAAGCAGCATATGTTGATCTTGGCAATGATCTTGGGCACGATGACGAAGAGCTTCGGCACCGATCTT GGCGTGCCAGAGGGAACTTCATCGCTTGCTCTGATATGCTTTCTCACCTTGAAAGAGGCTGGATTTCTCCAATCCCTGCC AATTGGAATGCGTCTCCACTAGGTTGTTAGAAGGTAGGATTTTTCAGCCTATGACTCTCATGTTCTCGATATGAAGCTGA GGTTACTTATAGTGATGTGTTTTTCTGCAGATATAGACTTGTGAAAGGGAGTGGTGGGGTGGGTTACTGTGTCTTCTTTT TGGGTGTTGGGTTTTTCTACATGTGGCTCTTTTTCTACAACATATGATGCTTAATCAACTGAATTTGCCTCTTTTCCTGA TTTTCCTTTCGGCAAAAGATGAGTTTTGCCACCAACAAAAGTATAAGATTGAAGTCCTTATTATTGAAGAAAATTACCAA GTCGACGAAGTCTTCATACCTGGGCCAGACATACCATTTTGAGAAGATTTTCATTACTTCTTTGAGTAATCTCCTTGTGG AAATAGCCAAAGCTCCTATGCCCGTGAATCTACCAGCAGCCATCATATTGACAACTTTGTGCGAGACTTGGTGCTGCTCC CTTATATTTTTTATCCGAAGGGCTTTTCCTTCCCCTTCCCATTCTTGAGTTTGGAGCTACTTTTGTGTCTCTCTCTTGAT TCTTCTGGCTCTGACCTTCGCCTCACAGTGATTGGCTCCTGGGCATGGAGATTTGCGGTGCCAAAAAATTTAGCCTCTTC TGTCTTACGTGTTGCGGTCTGACGAATGTTATAGCCTAGTTTTCTTATTCTTATTATACCTTCAATGGTATCCCAAAGGT TTATGCAATCATTTGTGGTATGACCTTGCCCGTCATGAAAAGCACAATATTTCGTCATACCAGTATTATTGGCAATGCGA GGCGCTGCCGACCTTGCGAATTTGTGACTCAAAACTCAAAACCTCCGGGCATATCCTGTAAGGGATTGTGGTTAGAAGAA TGTAATTAGTGTTTTGCACCTTCGTGGTTGCTATGGCCAATCCTAATCTTCCTAACTCCTACATCAAGGTCTTGTGGTTG TTTGTTGTCCAAGGCCTTACTCTTTTTCTTTAATTGCTAGGAATCATTAGGTTCCTTAGTTTCCATCTCACTAAGGTGAT CCTCCTTGCTGATAAAGTTCAAAGATCTGTCCTTAAACTCAGCAAGATCACGGGTAGGTTGCCAACCAAAGATAATACAA ACAAGGATTATGGTCCCATGGATTCCATTGCAATATGCAACATAGTATGAAGACACAAATTAGGAATTAAAGAGATAATA GAACCTTGAGACAAAATTGCGGTGGGGCTTGTTGTCCCCTTTAGTGATATGGGGAAAGGAATAAGAGGTCATCAGAAGAT CCTTGTTATTTATCTAATTGTGGATGAACTCGGCGGAGAAGTCGCATCAACTAGTAACGAATCCAGGCATTGAGAATTGG ACCATGTAAGGAAAATTTTCCTCAACGTTCAAGGGAAATCCTAGCTTATGATTGCTCAAGAGGCTCAAAGGCTACTTATA TCGCTCTCAAAGGCATTAAGGTGTTCACAGGGTCAATTACACCTATGTAGGGCTCAATTGCAAGCGCTATTTCGAAATAT GTTAGGTACTTGTATGGCTGACAAGGCTAGGGAAAAAGGAGTTTGGAAGCACAGAGATACATCATCTCTTTAAAGTCTGG AATATTTGTTAGTCCCCGGATTTAAGTGACTATTGGTGCTCGACTCACATTTTGGCTAACCACTGTGATTTCCTGTCTCC CCTAACAATGTTCGCCATTTTGATGGTCTTGCTCTTC
CDS sequence (LotjaGi6g1v0032700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGATGATGGAGCCTCCTCCACGCTCCTTCTTCCTCCTCCTCCTCCTCCTCCCCCTCCCAACCCTCTCCGAGATCCG CTCCTCCTTCATGCGCAACGACGACCACCCCATCGTCCCCTTCGACCAATTCGGTTTCACCCACAAAGGCCGCCTCGAAC TCAACGTCTCCAAGATCTCCCTCTCCAACTCCAATCTCGACCTCTCCAAAGTCGGCTTCTTCCTCTCCACTCTCGACTCA TGGCTTCACGTCCTCCAACAACTCGAAGACGGCGAGATCCGCTGCGCTCTCCAATCCGACCTCGTCAAATCCGTCTTCAC CTTCAACTCCCTCAACGGCCGCGACTCCTTCTCCACCGTCTACTCCCAAACCGACGCCGATCAGTACAATCTCGTCTTCG CCAATTGCCACCCTCAACAGCTCAAAATCACCATGGATGTCCGATCCGCCATGTACAATCTCGACGGCAGATCCAACCAA CGCGACTACCTCTCCGCCGGGAGAACCGTGCTTCCTAGGGTTTACTTTCTCTTATCGCTCATCTACTTCGCCCTCGCCGC CGTCTGGATCAGTGTTCTCTACAAGAAACGGTTAACCGTTTTCCGAATCCATTACTTCATGCTCGCGGTTATCATCATGA AAGCGTTGAATCTGCTTTGTGAAGCGGAGGATAAATCGTACATCAAGCGCACCGGAACCGCGCATGGTTGGGATATTCTC TTCTACATCTTCAGTTTTCTCAAGGGGATCTCGCTTTTCACTTTGATTGTGTTGATTGGAACTGGATGGTCTTTTCTCAA ACCCTTTCTTCAGGATAAGGAGAAGAAGGTTCTCATGATTGTGATTCCGCTTCAGGTTGTTGCTAACATTGCTCAGGTGG TGATTGATGAGAGTGGACCTTATGGTCATGATTGGGTTACTTGGAAACAGGTTTTCCTCCTTGTGGATGTTGTTTGTTGC TGCGCCGTGCTCTTTCCGATTGTCTGGTCTATTAAGAATCTCCGCGAGGCTGCGAGAACCGACGGGAAAGCTGCGGTTAA TTTGATGAAATTGACGCTGTTTAGGCACTACTATGTTGTGGTTATTTGCTACATTTACTTCACTAGGGTTGTGGTTTATG CTTTGGAGACGATAACGTCGTATCCTTATTCGTGGACTAGCGTGGTTGCTGCGGAGCTGGCCACGCTGGCTTTCTATGTG TTTACGGGTTACAAGTTCAAGCCGGAGGCTCATAATCCTTATTTTGTGATCGACGAAGAGGAGGAGGCCGCCGCAGAGGC TTTGAAGCTTGAGGATGAGTTTGAATTGTGA
Protein sequence (LotjaGi6g1v0032700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMMMEPPPRSFFLLLLLLPLPTLSEIRSSFMRNDDHPIVPFDQFGFTHKGRLELNVSKISLSNSNLDLSKVGFFLSTLDS WLHVLQQLEDGEIRCALQSDLVKSVFTFNSLNGRDSFSTVYSQTDADQYNLVFANCHPQQLKITMDVRSAMYNLDGRSNQ RDYLSAGRTVLPRVYFLLSLIYFALAAVWISVLYKKRLTVFRIHYFMLAVIIMKALNLLCEAEDKSYIKRTGTAHGWDIL FYIFSFLKGISLFTLIVLIGTGWSFLKPFLQDKEKKVLMIVIPLQVVANIAQVVIDESGPYGHDWVTWKQVFLLVDVVCC CAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRHYYVVVICYIYFTRVVVYALETITSYPYSWTSVVAAELATLAFYV FTGYKFKPEAHNPYFVIDEEEEAAAEALKLEDEFEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| PANTHER | 10 | 436 | 427 | 8.8E-241 | ||
| PANTHER | 10 | 436 | 427 | 8.8E-241 | – | |
| Phobius | 10 | 20 | 11 | - | – | |
| Phobius | 21 | 24 | 4 | - | – | |
| Phobius | 25 | 173 | 149 | - | – | |
| Pfam | 128 | 413 | 286 | 4.2E-52 | ||
| TMHMM | 171 | 193 | 23 | - | – | |
| Phobius | 174 | 194 | 21 | - | – | |
| Phobius | 195 | 200 | 6 | - | – | |
| TMHMM | 198 | 220 | 23 | - | – | |
| Phobius | 201 | 219 | 19 | - | – | |
| Phobius | 220 | 238 | 19 | - | – | |
| Phobius | 239 | 265 | 27 | - | – | |
| TMHMM | 241 | 263 | 23 | - | – | |
| Phobius | 266 | 276 | 11 | - | – | |
| Phobius | 277 | 295 | 19 | - | – | |
| Phobius | 296 | 306 | 11 | - | – | |
| Phobius | 307 | 329 | 23 | - | – | |
| TMHMM | 312 | 331 | 20 | - | – | |
| Phobius | 330 | 356 | 27 | - | – | |
| TMHMM | 351 | 373 | 23 | - | – | |
| Phobius | 357 | 375 | 19 | - | – | |
| Phobius | 376 | 380 | 5 | - | – | |
| Phobius | 381 | 401 | 21 | - | – | |
| TMHMM | 383 | 402 | 20 | - | – | |
| Phobius | 402 | 436 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi6g1v0032700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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