Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0046600 |
| Transcript ID | LotjaGi6g1v0046600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bis(5'-adenosyl)-triphosphatase; TAIR: AT5G58240.1 FRAGILE HISTIDINE TRIAD; Swiss-Prot: sp|F4KEV7|FHIT_ARATH Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT; TrEMBL-Plants: tr|I3S0X9|I3S0X9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0046600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:8617438..8620095) extracted from Lotus japonicus Gifu genome v1.2.
AAGGCGCAAATGTTGTTGCCTTGCATTGGGCAGATTCCCCAGTTTCTCCTGCAACGTTCTTCAACAACACTGCTACGAAT CCGACCAATCTGCTCCTCCACCATCAAGGTGAGTAGCATCGATCACCTCTTTCTCTCTCTCTGCGAGTTTTCCTGATTCC CATTCCCAACCATTTTCCCTTCTTCTTCTCTGAACGCAGATGGCTGCAGAACACTACACTTTTGGCCCTTACAAGATACA CCAGAGTGAAGTCTTCTACTCCACCCCTCTCTCTTATGCCATGGTCAACCTGCGTCCTCTTCTCCCTGGTAATGATCAAA CACGCTTCATTTATTTGTATTGATTGATTTTACTGATTTACATTAAGAACAGTGAAGCTAGTTAACGATTTCCTCTAAAA ATGTTGCCTTTTTACTGTACTGATTATAAAGTTGTTGTCTTTTATCAGATTAAAGAAGACCCATTTTGATGATTCATTTG TTTTTGTCATTTTGCAGGTCATATCCTTTTAATAGGTTTCAATAACATACAGCTGGGTTGTTGGGATGGTTGAATGTTGA TGCATTTTTTTAAGTTCAAGACTGATGAGACTTTTAATTGGGTGAAATTCATATATGTGTGTCACTATTTTGGTTGGAAA ACACTCAACAGTCACAAGCACAAGCATAGCTATATTTTTAATAGTTTGTTTGGAAACTGGGTAGGTTTACACTTTGAGGG TGAGAGATGATTTTGGAAGAAGCTATTGATTGGGAGTGACTTTTGTGGGGATGGAGGGTCAAGTGATTTTTAGAGGATTA AAAGTGGATCCATGCATATGTTGGAGTTTCATTGTATACCACTGCAGTACATGGTACATTGTAGTCCAGCAAGGTGTTTA GAAACTTCTAGAGTTCCGGTCCTTGACTGCCAGGAATCCAGGATCATCTTAGCAAGTTTGCTTTTGGGGCTTTTTTATAT TGTGTGTCTATTTTGACTTATGGTTTTATCTTGGTGACTAGAATGCATTCAACTATTGAGAGAAGATCCATGTTTGTTTG ATATACCATAGGGAGTCCTTTTTTTTTCTGCATATGTTGGTTTGGAGATGTTGGAAGTAAGCTAGTTTCATATTTATAGT TGTTTCTTAGTTAACTGCGAAAGAGCCTTAAGGACTTGTTCTAGAATTCTTTTATTTTACATAGTGTAGTTGTAAGCATG AATATAGATGACTATCGAAATGAATGACTTAACGGTGTTCACATGTGCTTATCTGTCCGAAGCGTGAAGTTAAGCGTTTC GTTGATCTCACTGCTGAGGAAACTTCTGATTTATGGCTCACTGCACAGAAAGTTGGCAGGCAGCTTGAGAGCTACCATAA GGCTTCATCACTTACTTTAGCTATCCAAGTAAGATTGAAGTGAAGTATGCTCATTTAACCATTTTTTACTAACTACTTTG CATTAAATTCATTCTTCATTACATATATATTTTATTCTGGAGGATAACTTACTGTTCATGGGGAACCCGGGATTGAGGCT TGCTTGTCTCAATCAATTTGATTGCCTTAACTAGTGATGCTATGGAGAATTCCAATTGACAGCCTCTGGTTCAGTTCTAG TGGTGCACTTTGTATTGCATATTATTAGCAATCATGTCTTTGGCTAGATTCTCACTTCTATTATTTGACCAAATTAGAAA TCAGATGTAGCTGGTTTTTTTTTCTGCTCCTCTTTCTGTGTAGGCTTTTTACCTTTTCTCTCAGTGGCTCATATGTTCTT ATGTGAAGAAGATGATATTTTCTGTATTAACAATGTGGTAGTAAAAAAAAAGATGAAGGTTAAGAACTTATTGTCCAACT CCAACATATTAACTATACAAAATGTTTGACTGGTTGATTATCTTTCACTTCTTTTCCCCAAGTGCTCATGATAGATATAT TTGTTCTAATGACTATTTTCTTTCTAATTTTTTGTTGCCATGTTATTAAGCGTATGGAACAAGAGGATGAACTTCATTGG TGCATTATACTTTTTGATTGAACAATTCTCCTTTCTTCTTTGAACAATTGTGCCCAAGTGACAACTTGTCTAGTATTTGT AATTACTTTCTTAGGTGACATTTGAAAATGGATGTGATTTTGATTATTTAATATTAAGCAATTTTCTATTGTTGACAATC TAATACTAAAGGCGCTCGCCACCTTTATCACATTAGGGGGGGATTCAATATTAAGATCATGGCCTGTATACATATACTTA TATAGTATTCAAAATTACCTACTTGTACAGACTCTGCAATGTGCATGATATGCTACTGGTGTCTCACAAGAAAAAACTAA ATTATCTTTCTGTACTTTAGGATGGGCCCCAAGCAGGACAGACAGTGCCTCATGTTCACATTCATGTTGTCCCTCGGAGA GGAGGAGATTTCGAGAACAACGATGAGATATATGATGCAGTAGGATAAGAACTCTTCTCCTGGCTATGCTGTTGATTCTA GTAATTTATTTCATTTGATATTTATATTTTATGCTTTATCTGCTGTTTGTCATTGGTTCAGATGGATGAGAAGGAGAAGG AATTGAAAGAAAAGCTTGACTTAGACAAGGAGAGGAAAGATAGAACCCTCGGTGAGATGGCTCAAGAGGCAGATGACTAC AGAAAACTTTTCTTATGA
CDS sequence (LotjaGi6g1v0046600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGTTGCCTTGCATTGGGCAGATTCCCCAGTTTCTCCTGCAACGTTCTTCAACAACACTGCTACGAATCCGACCAAT CTGCTCCTCCACCATCAAGATGGCTGCAGAACACTACACTTTTGGCCCTTACAAGATACACCAGAGTGAAGTCTTCTACT CCACCCCTCTCTCTTATGCCATGGTCAACCTGCGTCCTCTTCTCCCTGGTCATGTGCTTATCTGTCCGAAGCGTGAAGTT AAGCGTTTCGTTGATCTCACTGCTGAGGAAACTTCTGATTTATGGCTCACTGCACAGAAAGTTGGCAGGCAGCTTGAGAG CTACCATAAGGCTTCATCACTTACTTTAGCTATCCAAGATGGGCCCCAAGCAGGACAGACAGTGCCTCATGTTCACATTC ATGTTGTCCCTCGGAGAGGAGGAGATTTCGAGAACAACGATGAGATATATGATGCAATGGATGAGAAGGAGAAGGAATTG AAAGAAAAGCTTGACTTAGACAAGGAGAGGAAAGATAGAACCCTCGGTGAGATGGCTCAAGAGGCAGATGACTACAGAAA ACTTTTCTTATGA
Protein sequence (LotjaGi6g1v0046600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLPCIGQIPQFLLQRSSTTLLRIRPICSSTIKMAAEHYTFGPYKIHQSEVFYSTPLSYAMVNLRPLLPGHVLICPKREV KRFVDLTAEETSDLWLTAQKVGRQLESYHKASSLTLAIQDGPQAGQTVPHVHIHVVPRRGGDFENNDEIYDAMDEKEKEL KEKLDLDKERKDRTLGEMAQEADDYRKLFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 19 | 189 | 171 | 1.1E-87 | – | |
| PANTHER | 19 | 189 | 171 | 1.1E-87 | – | |
| Gene3D | 37 | 190 | 154 | 2.4E-61 | ||
| ProSiteProfiles | 38 | 145 | 108 | 21.531 | ||
| CDD | 41 | 149 | 109 | 2.97261E-50 | ||
| SUPERFAMILY | 47 | 189 | 143 | 4.95E-34 | ||
| Pfam | 48 | 139 | 92 | 2.3E-25 | ||
| ProSitePatterns | 119 | 137 | 19 | - | ||
| Coils | 146 | 170 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi6g1v0046600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…