Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0066100 |
| Transcript ID | LotjaGi6g1v0066100.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DA1-related 1; TAIR: AT2G39830.1 DA1-related protein 2; Swiss-Prot: sp|Q0WSN2|DAR2_ARATH Protein DA1-related 2; TrEMBL-Plants: tr|G7JA19|G7JA19_MEDTR Zinc ion-binding protein; Found in the gene: LotjaGi6g1v0066100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:12562080..12567691) extracted from Lotus japonicus Gifu genome v1.2.
AAAAATGAAAAATCTAGTTAAATCTTGTTTATTACTCCCCCCTAAGCAGGAACCTGTCTTTCTGCAATTGCCTACTTTCT CTTCAGTGGTTTCCAAGCCAAGAATCTCTCCCACCCTGTGTGCCACTTCCTCACAGATTCCTTTTGAACGATGTCTAATT ACTCCGTGTTTTTCATCTCCTGCTCCTTTTCTCTCCAACCCCTTGTTTTTTCTCACCATCATTTTCAATTTTCCACCATC CTTTTTGCTTTCTCTGTGTCTCACATAACTAGATACAAAATCTATATATAAGTAGCTTCCCATCGTCATGGCTCCTCCTC CTTCAGATATCAATCATCTCTCTCACTCTTGCATATATGGTATTCTCTCTTGTCTTCTTAATTCTTCTTCTTCATCTGTT TTCAGTTTTTCACCATAAAAATTAAAGCTTCATGTACCTATAGCACTTGTTATCAATACATAGATTTTGCAAAACATTTA GAGTAACCCATGAAGCTATTGTTTTGAACTTTAAGTAATTCTTTCTTTTTGTTGATTTTAGTAAATGGGTATGGATGCTT GTTGTCCAAGTTTTCTCATTTTACTTTGCATATGATTTCAGAAGTATGTTATAACCGAGTTGATACACGAAAAATCGATT TGAAATGTGACTTGGAGCTTCCAAACTAACCATTTTTTTTGTGGGAAGCAAGGGATTTTGAATCTTCATACACAGAGAGA AAGTCTGGTTTTGTGAAATTGTTTGGCAAGATTTTCAAAATTTGGTCCAGTAGAGGAAAGGGTCGTGGTCATCATCTTCA GCAGCCTGCGGAGGAAAACATGGTTTGGCGAGTTCCAATTAGATCTTCGGTAAACACAATTACTCACTATGAGCTTGTTT GGAGGCCGATCAAAGAGCACTTATTGGAGTTTATGCAGTGTTTTTTTTTGAATAAATAGTTCCAAAAAGTGCTCTTTAGT CCTAATTCAAATGGAAATTATATTTTTCCTTTTAATTAAATGATATATCTATTGTTGCTGTCCTTGTAAAAAATATGGTT GTTACTTTTCTCACAAGAAAAATGTTAATGATTAGTCACAACATGTTACCCTAGTCCAAATCCAAGTTGACTTTATTTTT TGTCATTATTCATAAGTATAACTCAACTATGAATACTAGAAACTTGACTTCCTTTGTCTTGTTTGCTTAGTTGGACAGCA TTACAAGTGAGACTCATTACTTTGGTCTGCAGTTTAAAGTACTGAGTTTTAAACACATTTTTTCTTTCCAAATATTTGCT TCTGCAATTTCAACCAGACTTGAATCCTAGCTGTGCTCTAGGAAATTAAAGCCATTCAAGTTGTGCTGCATCATTTACTG ACTTACTGTTGAGTTATAGCTGCACTTTAAGATTAATTTTCTAAATTGTGGATTGTATAATCTATGAGTTGTTTGTACAT AATGATGTTCTAGTTATTTACTTCCAATGTTTTGTGGGATTTCTTTCCTGAGTGCATTGTTCATGTTCTTTTCAAAAATA CCTGTTTGGTGTGGAAAATTAAGGCCATTTAGTGATGTAGCAGCCAAAAATAGTTCATAACTTGATATGTAGTGATCATT TTGGGTTCCTTTTACCATCATAATTTCGATTTGGGAGTAAGATGTGTTGAATAATATTTTTGATGTCATTAGGGTAACCG TGCTAGATCTCAGAAGGAGGAAGAGGATCTGGACCGTGCAATAGCACTTTCTTTAGGTGAAGGTTTAAAGAAACCATCTG GTAAGTACTAAATTTTCAAGAAAGTATTCTAGCCATCATGATATTGGTAATCAGAAGATTAAAATTTTATTCCCATTTGT TCATCAAGGATATAGATGGCGGACAAGTACTGATGAAGATCACACAAAGGCACTTCAGGATCGAATGCACTCATCTGCAT ACCCTCCGTATGCCCCTTTACCTTTTTATCCTCGTGGATACAGGTAAAATTTCACACTCATCTTGTATCTGATATGTGAA GGCCAAACATAAAGTGTTTTACTATTTGATCAATCATGCATGATAATTGAAAATTGTTATTGGCTGCCATTATTCAAAAT CACAAAACTCAACATGTCTCAGATATTGTGTATAATATATACTTGTGTTTGAAACAAAACTTTAAAATAGCTTCAGATTT CTCTGTTGATTTTACCATACATTACTCGCATGTGTGGAAATTCCTTAACAATTGATTGTAAAACTAGAATCAATTCTAGG GAGAAGCTTCTGTGAGTCTCTTATATGTAATTGATTTTATTCGGTTTCATTGTTCTGATGCCGATACATTATGATGGTTC TGCTTCATCATTTATCTACAATTGATTATGTGCAGCATGCCATCACATATCAGAATATGTGGAGGGTGCAACAAGGAAAT ACTCCATGGAAACTGTTTGGGAGTTGAGAATCGTTATTTTCATTCAGATTGCTTCAAGTGTCACTCTTGTCATCACCCCA TTAAAGAGCGTGAGGTAGTTTGATCCTCTGGAGATATCATCTATTTTCCTTCAACAAACACATTCACACAGGCACAACAT GCAGATGCACTCATTCGCGGCATAACTTCTATAATTCTATTCAATGTCTTCCCACAAATTCATGTGGTTAACACTTTCAA AGCTATGCCTGCATAAGCATTGATTTTAATATTTCTCTTTTATCCTCTCTCTCTCTCACTGCCTTGTTTTTTCTGTTGAT CTCAGTTCTCTTTGTCAGGGAAGCATCCATATCACAAGTCCTGTTTTATAAATTTGACACACCCTAAATGTGAAGTTTGC CATCAACATGTAAGTTAGTATTCCCCTGTCTTTGCTTGTTCACATTGTTCTGCTTCCTAATTCTTAGTTTTCTTCAATAA ATAGTTAGTTTCTGATGACTTAGCCAAATAGTATTACTAGTCTTCTCATGACAATTGAATTAATTTAAATTATAGTCATC TTTGATATCTTATTCATTTATAAGCCCTTGGCGGATTGTGGAAATTATGTTTTTTACATTAATCATGAGCTTTCCATTGA CCAAATGCATGTTTGAAATTCTTGTACAATTGATTCTGAAGCCAGAATAATTTCTGATAAGAAACTTCTGTGAGTACTTT CTAGGTTACAGAATTGATTTCTGAAAAAAGCGAAGTTGATCAAAACATGCTATTATCATGACTCATGAGACTAGCCTAGG AAAAATATAATCTCTGTGTGTCTATTACGATTGGCCTATATAATCTTCACAGTTGATTAAAAGCAATATTAACACTTGTG ATAATTTATTTCACTTTCAGATACCTATAAATGCTGCTGGTTTGATTGAGTATAGGTGCCACCCCTATTGGAACCAAAAG TATTGTCCGTCTCATGAATATGATAATACATCTCGATGCTCTAGTTGTGAAAGATTAGAGGTACTGATTTAACTGGTACC TCAGAATGTTTCATTATTATTTTTTCAGAAGAGGAAATAATCTTTTGCTGTGTGTTTCTTTCCTTTATCTGACATATAAA GTCTCGGGGTGAAAGATACATTAGATTGGAAGATGGACGAGTTTTGTGCCTCGAGTGCATAGAATCTGCTATAACGGATA CTGGAGAATGTCAACCTCTTTATCATGCTATCAGAGACTATTATGAAGGATTGAACATGAAAATTGATCAACAAGTACCC ATGTTACTCGTTGGAAGAGAAGCACTCAATGATGCTATTGTTGGGGAGAAAAATGTAATGAGTCGTCCATTCTTTTGATT TTCATTCATAGAATTAACTCAACCCCTCTTACCCTTTTTGATTTATCACAGGGTTTCCATCACTTGCCAGAAACAAGGGG CTTATGCCTTTCAGAAGAACAGACTGTGACCAGTGTATGATTTGCAGAATCTTTTGTTTCATAGGATTAGAGAATGTTGA AGCGTTCATGAACCAACCATGTTACAAATTTTCTGAGGTACTTTCACTGATCTGATTTTCTGTTGGTTCAGGTGTATAGA TGGCCAAAATTTGGAGGCCATCGATTAGTAGGAATGAGAACTCAACCTCAGAAACTGACTAGGAAATGTGAAGTTACAGC TATTCTTGTCCTCTATGGTCTTCCAAGGTAACCAATATTTAATACATAAGGAAACTTCGTTTTTCTTGTCCCTCTGATTC CATTTTGAATACTATTGAGTTCCTATAAATTTAATATAATAGTCTCTCAATAGCAGAACTACTGAAAGATTAGAGATATC AGATAAAATCATTCGTCCATCAGCTCAAGCTTTTGGGATAGTTTGGTTCATGACATTGTATGAGAGACTCTATGACCAAG TAGTTTAGAGATCGATCCATGTTGCCCCCAATTATTCTAATTAAAAGTTAAATTTAAGCACAAGGTAGGTGAGCCTGTGC ATTGTCCACACTTCAAGCTCAATGGGCTCTTGCGTGATACTAATCCATGTTGTCCCCAATAATTCTAATTAAGAGTTAGA ATTTAGCCGAAGGTAGGTGGATGCGTGCATTGTTGGCACTTCAAGCTCTATGCACTCTTGCATAAGGAGACATATTAGAA CATAATATAAAATAACTCATGTGTCTTCAGTCTTAACCCAACCCTTCAGGCTTTTAGAATAGTAGTTCATGATATGAAAG TCAAATCTACTTTATGCTTGTGATGATGTTCAAACTTTATATTAAATGTTCTGATAAATTTATGGGATGCAGGTTACTCA CAGGTGCCATCCTTGCCCACGAGTTGATGCATGCTTGGTTGCGCCTTAAAGGTTATATACATATATTGATCCTATCTTGG CATTCTACGCCTTAGTGCATGTTTGAAAATTGAATTGATTCTGGTTTTGGGGAAGAAACTTATATGAGTAGATTCTAGAT GCCATAATTGATTCGGGGAATAAGAAGTTGATCCAAACATGCTTTTAGTGTGACATAATTTAACTTTCTTCTGATTTCTC TTAAACTAATTAGCAGGTTACCGCAACCTTACCCCTGAAGTAGAGGAAGGTATTTGCCAGGTTCTTTCTTACTTGTGGCT TGATGCAGAAGTGATGCCAGGCTCAAGAACTATGCCATCAACATCAATAGCATCTTCATCATCCTCCTCCTCCTCCTCAT ACTCATCAAAGAAAGGTGTGAGATCTAAAGTTGAAAATAAATTGGGAGAATTTTTCATGCACCAGATTGCCAATGATTCT TCCCCAGCTTATGGTGGAGGCTTTAGAGCAGCTAATGCAGCTGTTAATAAATATGGTTTACGTGCTACTCTGGATCATAT TCGTTTAACTGGCCAGTTCCCACTGTAATAAGGGAAACCTTCTCTGAGGAGTAAATGTGTTCCTATAAGGATGTTCCAGT CCAAATTCACTAAAATTATGCATGCCTTGTTTTAGTTTTCTGAGCAGTTTCTTCTTATGCGATGCTTTTCCAAGAGATAA TGATATGTGCACATTATTCTTTACATTACTGTCATTAGGTTTTAAAACCAAAATGTTTGGTGGACAGCTGCTTAGTGTTG TCTGCCACGTTAAGAACCGTCACAAAATTTGGTCTCTAAACGCGGTCGCTACAGTGTAGCTTAGCAGTTCACGTAAATGA TACAATAAAAAT
CDS sequence (LotjaGi6g1v0066100.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTGGCGAGTTCCAATTAGATCTTCGGGTAACCGTGCTAGATCTCAGAAGGAGGAAGAGGATCTGGACCGTGCAAT AGCACTTTCTTTAGGTGAAGGTTTAAAGAAACCATCTGGATATAGATGGCGGACAAGTACTGATGAAGATCACACAAAGG CACTTCAGGATCGAATGCACTCATCTGCATACCCTCCGTATGCCCCTTTACCTTTTTATCCTCGTGGATACAGCATGCCA TCACATATCAGAATATGTGGAGGGTGCAACAAGGAAATACTCCATGGAAACTGTTTGGGAGTTGAGAATCGTTATTTTCA TTCAGATTGCTTCAAGTGTCACTCTTGTCATCACCCCATTAAAGAGCGTGAGTTCTCTTTGTCAGGGAAGCATCCATATC ACAAGTCCTGTTTTATAAATTTGACACACCCTAAATGTGAAGTTTGCCATCAACATATACCTATAAATGCTGCTGGTTTG ATTGAGTATAGGTGCCACCCCTATTGGAACCAAAAGTATTGTCCGTCTCATGAATATGATAATACATCTCGATGCTCTAG TTGTGAAAGATTAGAGTCTCGGGGTGAAAGATACATTAGATTGGAAGATGGACGAGTTTTGTGCCTCGAGTGCATAGAAT CTGCTATAACGGATACTGGAGAATGTCAACCTCTTTATCATGCTATCAGAGACTATTATGAAGGATTGAACATGAAAATT GATCAACAAGTACCCATGTTACTCGTTGGAAGAGAAGCACTCAATGATGCTATTGTTGGGGAGAAAAATGGTTTCCATCA CTTGCCAGAAACAAGGGGCTTATGCCTTTCAGAAGAACAGACTGTGACCAGTGTGTATAGATGGCCAAAATTTGGAGGCC ATCGATTAGTAGGAATGAGAACTCAACCTCAGAAACTGACTAGGAAATGTGAAGTTACAGCTATTCTTGTCCTCTATGGT CTTCCAAGGTTACTCACAGGTGCCATCCTTGCCCACGAGTTGATGCATGCTTGGTTGCGCCTTAAAGGTTACCGCAACCT TACCCCTGAAGTAGAGGAAGGTATTTGCCAGGTTCTTTCTTACTTGTGGCTTGATGCAGAAGTGATGCCAGGCTCAAGAA CTATGCCATCAACATCAATAGCATCTTCATCATCCTCCTCCTCCTCCTCATACTCATCAAAGAAAGGTGTGAGATCTAAA GTTGAAAATAAATTGGGAGAATTTTTCATGCACCAGATTGCCAATGATTCTTCCCCAGCTTATGGTGGAGGCTTTAGAGC AGCTAATGCAGCTGTTAATAAATATGGTTTACGTGCTACTCTGGATCATATTCGTTTAACTGGCCAGTTCCCACTGTAA
Protein sequence (LotjaGi6g1v0066100.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVWRVPIRSSGNRARSQKEEEDLDRAIALSLGEGLKKPSGYRWRTSTDEDHTKALQDRMHSSAYPPYAPLPFYPRGYSMP SHIRICGGCNKEILHGNCLGVENRYFHSDCFKCHSCHHPIKEREFSLSGKHPYHKSCFINLTHPKCEVCHQHIPINAAGL IEYRCHPYWNQKYCPSHEYDNTSRCSSCERLESRGERYIRLEDGRVLCLECIESAITDTGECQPLYHAIRDYYEGLNMKI DQQVPMLLVGREALNDAIVGEKNGFHHLPETRGLCLSEEQTVTSVYRWPKFGGHRLVGMRTQPQKLTRKCEVTAILVLYG LPRLLTGAILAHELMHAWLRLKGYRNLTPEVEEGICQVLSYLWLDAEVMPGSRTMPSTSIASSSSSSSSSYSSKKGVRSK VENKLGEFFMHQIANDSSPAYGGGFRAANAAVNKYGLRATLDHIRLTGQFPL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | - | – | |
| PANTHER | 1 | 452 | 452 | 7.9E-293 | – | |
| PANTHER | 1 | 452 | 452 | 7.9E-293 | – | |
| Gene3D | 51 | 216 | 166 | 2.0E-19 | – | |
| SUPERFAMILY | 80 | 111 | 32 | 3.3E-5 | – | |
| ProSiteProfiles | 84 | 144 | 61 | 10.89 | ||
| SMART | 85 | 137 | 53 | 1.7E-8 | ||
| Pfam | 86 | 140 | 55 | 1.5E-8 | ||
| ProSitePatterns | 86 | 120 | 35 | - | ||
| CDD | 86 | 138 | 53 | 6.22228E-21 | – | |
| Pfam | 235 | 447 | 213 | 1.4E-97 | ||
| MobiDBLite | 375 | 395 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0066100.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…