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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0071000 |
| Transcript ID | LotjaGi6g1v0071000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pectinesterase; TAIR: AT4G02330.1 Plant invertase/pectin methylesterase inhibitor superfamily; Swiss-Prot: sp|Q8RXK7|PME41_ARATH Probable pectinesterase/pectinesterase inhibitor 41; TrEMBL-Plants: tr|A0A151S897|A0A151S897_CAJCA Pectinesterase; Found in the gene: LotjaGi6g1v0071000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:13509276..13513149) extracted from Lotus japonicus Gifu genome v1.2.
AGACTCACAGAACATGCATGTTCTTCCCTCATAGCTAACATCGCTCCTTATTCCTTTGTTTTTTACCAACCAATGGCTTT CATAAACTTTGCCCTTCTCACGCTCTGCATTTCGCTTATTCTTTCCATCTTGGCATCATCATCCATAGCTTCCAACCCAC CTATAGTTCCCCCAGAAACTATTTGCAGATCCACTACAGATCCTTCCTTCTGTAAAACAGTGCTTGCAAACAAAAACGGC ACCGTCTTTGACTATGGCCGCATTGCTGTCACAAAGTCCTTATCCCAATCCCGCAAGTTCTTAAACTTAGTGGATTCACA CCTTCAAGATAAATCATCTTTGTCCCAACCCACAATTTCTTCTCTTGAAGATTGTCTTTTTCTTGCTGAACTAAACTTTG AATACTTATCAAACACTATTAACACCGCTAATAAATCTAGTGATGTTCTTCCCTCTTCCCAAGCAGAAGAAATACACACG TTACTAAGTGCTGTTCTCACAAACCAACAAACTTGCTTAGATGGCCTAGAGACCACGGCTTCTGATCAGAGAGTGAAGAA TTATTTATCATCCTCGCTTTCTAATGATACAAAGCTTCATGGTGTCTCACTTGCCCTCTTTGTGAAGGGCTGGGTGCCTG AGAAGAAAATACAAACATCATGGCAATTTAATGGGAGACACTTGGGTTTTCGGAACGGTCGCTTACCATTGAAGATGTCA AATCGAGCACGTGCCATTTATGATTCTGCGGTCTCTAGAGGCCGCGGGAGAAAACTGCTTCAAGCGTCGGGTGACAACCT AAGCGTCACAGTGAGTGACATCGTGGTTGTTAGTCAGGATGGAAGTGGAAATTTCACCGCTATCAACGATGCTATAGCTG CTGCACCAAATAACACAAATGGTAGTGGTGGCTACTTTCTTATATTTGTCACCGAGGGTGTGTATCAAGAATATGTGTCT ATACCAAAAAACAAGAAGTACTTGATGATGGCAGGAGATGGGATCAATCGAACAATTATCACCGGTGATCATAATGTTGT GGATAATTTTACCACATTCAACTCTGCAACATTTGGTAAGCAAATATTAAGTACTGTGCACATGTTCATGTCTTTATAAC CTAGGAAGGGATTTTAAAATTATATCTTTGGCTTCAGCCACAAGTAAATGAATTTTGACATGCATGTTGCAATATTTTGT TTTCCAAAATACAATTTGTATATAAATTTTGTCTGAATTTTTACGAAGTACACTGGATACACTTGCATATGTACTGATTT GCAATTATGACATGTCATAGCTTAAAGAAAAATATAAAATTGAAGGAAATTGTCATATTAGTAAATATTTAAAAAGTGGG AGGTTGAGCTTTTTATTTGACAGCAGCACAACCTAAGTTGTGTTTTTCATAGAATAGATTAATAGATTAAGTTCCTCTAT CTTTATTTGATATCTCATTTTTCGTCCTACCAATAAAATTATTTCATTTTAATTAAAAAAAATATGGATATATACTTATA AACATACAATATATAGTGTGGTTTTTAAATGATGTCACCATTTTATTAAGAGTTTAATTTTGATGCACCGACGGCGTAAA GTTTTTTTACACCGTCAACCAATCAGATTTCAAGGATGTGACATGTCAATTAAAGAAATTAAATGAAAAGAGAGATTTTC TCACATCCTTGAAATCTGATTGGTTGACGGTGTAAAAAAACTTTACACCGTCGGTGCATCAAACTTTTTCTCTTTTATTA ATGTTAGGAACGAGACATCAAATAGCATAAGAGTTAACCATAAAAAAAAAAATAGCATAAGAGTCCCTGAGGGTTACCTC AAGTGGTAAGATATGTGGGATATAAGCGTTTAAGAGGGGAAGGTTTGGGGTTCGAATCCTGAAAGAGAAATTTGAAGGGA TTTTCTAACTTACTAAGAGCATCTCCAATGCTAGTTCTTATTTCTTAGTTCTTAGCACTATTCATGTGGGCCCGTATTGC CACATGTGTTTAAGCAATTCTCAAGCAATTTTGTTCTAACCATGAGTTCTTAGTTCTTACAACTATTCATTTGGTCCCAC CAACCACATTATTTATACTTTTTATTTTCATAATGTAATAAAACAAAACTCATAAAGTAATAAAGTGATTTGGATGAGAG AGAAATAATTAATATTTTAAGCTAAGAACTCAAAAAGCAAAACATCTTATATAAGAACTGAGTTCTTATTTTTAAGAACT AAGGAGTTCATGTCAGCACCTCCAATGGTAAAGCTCTTAGTTCTTAGTTCTTAACTCCAAAATAAGAACTAAGAACCTTG CATTGGAGATGCTCTAACCTACTAACTTCCTCGTAGTTCAAACCACCACAAATTCATGAGTAAAATAGTTAGGGTATATT AGTGACGGTTGCAACCGCCACCAAGTAATGAAGAAACCTAGCAGAGGTTTGAACCGACATAAAATCAAACACAAAATCAT GCTGACGCACTAAAATATAGCAGCGGTTAGAATTTATATCGGCAACGCCTTCCTCCTTATTAATTTGTTTGTAGTATGAA AATTTCCATCAAGCATTTGCTAAGTTTAGGGAGAATTAACATATTGGGTAGTCGCTACACAAGCGAAACAATTTCTTTAT TAGAATAGTATTCTAAAGTTATATTTTCCCTCCTCAAAATTTGGTTACTACCATCTCTAATGAGAGTATGAGACATTGTT AATTTTACTTAATTCCTAATTCTATCACAAAGAGCACCTCTTATACACATATTCCATGTGTAGCTGTTGTAGCGCAAGGG TTTGTAGCAGTCAACATAACATTCCGAAACACAGCTGGGCCAAGCAAGCACCAAGCAGTTGCTGTAAGAAATGGAGCTGA TCTGTCCACCTTCTACAGCTGCAGCTTTGAAGGGTATCAAGACACTCTGTACACACACTCTTTGAGGCAATTTTACCGTG AATGTGACATCTATGGCACAGTTGATTTCATATTTGGAAATGCCGCTGTTGTTTTCCAAACTTGCAACATCTATCCACGC CTCCCCATGAGTGGACAATTCAATGCCATTACTGCTCAAGGTCGAACTGATCCAAATCAAAACACGGGAAGTTCCATACA TAATGCCACTATTAAAGCTACTGAAGATTTGGCTCCGAAGGTTAGTACAGTGAAAACATACCTTGGGAGGCCATGGAAAG AGTACTCAAGGACTGTGTATTTGCAATCATTCATGGATAACTTGATAGATCCCACTGGTTGGCATGAATGGAGCGGAGAT TTTGCATTAAGTACCTTGTACTATGCAGAGTATAATAACACGGGACCTGGTTCAAACACTGTGAATAGAGTGAATTGGCT AGGCTATCATGTTATTAATGCTACTGATGCAGCTAATTTTACTGTGTCTAACTTCTTAGATGGGGATAATTGGCTGCCTC AGACTGGTGTCCCATACTTGAGTGGATTGATATAGCTAAATAGACTTACAAATTTTCAACTGTTTGACCATTGGTAACAA TGGGATTTAGCGACGGTTTTCAAGCCGTCGATATATCGTCAATAATTACGTGTTTTATTGTAGTGAAGCTTTGGTGTGCT TTTACATTCTTTCTAGTTGGATTTGAAAACCTACTCTATTTTGTATTTTTATTTAAGAGAGTTGAAATTAGTGTGAGGAT TCTTGAACTGATTAAACGATGAAGCATGAAGCGATTGTAGATCCCGTTTTCTGAAGAACATAAATCTCTATCACTGATTA GTTATTGGCTTTTGGGATTTTACGATGAAGATTGTTCTTGTACTTTTAAGGGGTGATTGTAACTTATTAACTTGAATAAA TCGAGTTCTAGACGATTGTCTATTAGAAAATCAC
CDS sequence (LotjaGi6g1v0071000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTCATAAACTTTGCCCTTCTCACGCTCTGCATTTCGCTTATTCTTTCCATCTTGGCATCATCATCCATAGCTTC CAACCCACCTATAGTTCCCCCAGAAACTATTTGCAGATCCACTACAGATCCTTCCTTCTGTAAAACAGTGCTTGCAAACA AAAACGGCACCGTCTTTGACTATGGCCGCATTGCTGTCACAAAGTCCTTATCCCAATCCCGCAAGTTCTTAAACTTAGTG GATTCACACCTTCAAGATAAATCATCTTTGTCCCAACCCACAATTTCTTCTCTTGAAGATTGTCTTTTTCTTGCTGAACT AAACTTTGAATACTTATCAAACACTATTAACACCGCTAATAAATCTAGTGATGTTCTTCCCTCTTCCCAAGCAGAAGAAA TACACACGTTACTAAGTGCTGTTCTCACAAACCAACAAACTTGCTTAGATGGCCTAGAGACCACGGCTTCTGATCAGAGA GTGAAGAATTATTTATCATCCTCGCTTTCTAATGATACAAAGCTTCATGGTGTCTCACTTGCCCTCTTTGTGAAGGGCTG GGTGCCTGAGAAGAAAATACAAACATCATGGCAATTTAATGGGAGACACTTGGGTTTTCGGAACGGTCGCTTACCATTGA AGATGTCAAATCGAGCACGTGCCATTTATGATTCTGCGGTCTCTAGAGGCCGCGGGAGAAAACTGCTTCAAGCGTCGGGT GACAACCTAAGCGTCACAGTGAGTGACATCGTGGTTGTTAGTCAGGATGGAAGTGGAAATTTCACCGCTATCAACGATGC TATAGCTGCTGCACCAAATAACACAAATGGTAGTGGTGGCTACTTTCTTATATTTGTCACCGAGGGTGTGTATCAAGAAT ATGTGTCTATACCAAAAAACAAGAAGTACTTGATGATGGCAGGAGATGGGATCAATCGAACAATTATCACCGGTGATCAT AATGTTGTGGATAATTTTACCACATTCAACTCTGCAACATTTGCTGTTGTAGCGCAAGGGTTTGTAGCAGTCAACATAAC ATTCCGAAACACAGCTGGGCCAAGCAAGCACCAAGCAGTTGCTGTAAGAAATGGAGCTGATCTGTCCACCTTCTACAGCT GCAGCTTTGAAGGGTATCAAGACACTCTGTACACACACTCTTTGAGGCAATTTTACCGTGAATGTGACATCTATGGCACA GTTGATTTCATATTTGGAAATGCCGCTGTTGTTTTCCAAACTTGCAACATCTATCCACGCCTCCCCATGAGTGGACAATT CAATGCCATTACTGCTCAAGGTCGAACTGATCCAAATCAAAACACGGGAAGTTCCATACATAATGCCACTATTAAAGCTA CTGAAGATTTGGCTCCGAAGGTTAGTACAGTGAAAACATACCTTGGGAGGCCATGGAAAGAGTACTCAAGGACTGTGTAT TTGCAATCATTCATGGATAACTTGATAGATCCCACTGGTTGGCATGAATGGAGCGGAGATTTTGCATTAAGTACCTTGTA CTATGCAGAGTATAATAACACGGGACCTGGTTCAAACACTGTGAATAGAGTGAATTGGCTAGGCTATCATGTTATTAATG CTACTGATGCAGCTAATTTTACTGTGTCTAACTTCTTAGATGGGGATAATTGGCTGCCTCAGACTGGTGTCCCATACTTG AGTGGATTGATATAG
Protein sequence (LotjaGi6g1v0071000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFINFALLTLCISLILSILASSSIASNPPIVPPETICRSTTDPSFCKTVLANKNGTVFDYGRIAVTKSLSQSRKFLNLV DSHLQDKSSLSQPTISSLEDCLFLAELNFEYLSNTINTANKSSDVLPSSQAEEIHTLLSAVLTNQQTCLDGLETTASDQR VKNYLSSSLSNDTKLHGVSLALFVKGWVPEKKIQTSWQFNGRHLGFRNGRLPLKMSNRARAIYDSAVSRGRGRKLLQASG DNLSVTVSDIVVVSQDGSGNFTAINDAIAAAPNNTNGSGGYFLIFVTEGVYQEYVSIPKNKKYLMMAGDGINRTIITGDH NVVDNFTTFNSATFAVVAQGFVAVNITFRNTAGPSKHQAVAVRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGT VDFIFGNAAVVFQTCNIYPRLPMSGQFNAITAQGRTDPNQNTGSSIHNATIKATEDLAPKVSTVKTYLGRPWKEYSRTVY LQSFMDNLIDPTGWHEWSGDFALSTLYYAEYNNTGPGSNTVNRVNWLGYHVINATDAANFTVSNFLDGDNWLPQTGVPYL SGLI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 26 | 26 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 21 | 16 | - | – | |
| PANTHER | 10 | 563 | 554 | 7.2E-290 | – | |
| PANTHER | 10 | 563 | 554 | 7.2E-290 | – | |
| Phobius | 22 | 26 | 5 | - | – | |
| Phobius | 27 | 564 | 538 | - | – | |
| SMART | 29 | 182 | 154 | 2.0E-19 | ||
| Gene3D | 34 | 182 | 149 | 2.7E-11 | ||
| Pfam | 35 | 181 | 147 | 2.6E-18 | ||
| CDD | 36 | 183 | 148 | 3.93224E-32 | – | |
| SUPERFAMILY | 36 | 183 | 148 | 2.35E-22 | ||
| SUPERFAMILY | 246 | 562 | 317 | 8.97E-109 | ||
| Gene3D | 248 | 564 | 317 | 5.9E-130 | ||
| Pfam | 251 | 549 | 299 | 3.5E-138 | ||
| ProSitePatterns | 397 | 406 | 10 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. | ||
| Molecular function | Pectinesterase activity | Catalysis of the reaction: pectin + n H2O = n methanol + pectate. | ||
| Biological process | Cell wall modification | The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly. |
Expression pattern of LotjaGi6g1v0071000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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