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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0076200 |
Transcript ID | LotjaGi6g1v0076200.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | N-(5-phosphoribosyl)anthranilate isomerase; TAIR: AT1G07780.1 phosphoribosylanthranilate isomerase 1; Swiss-Prot: sp|Q42440|PAI1_ARATH N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; TrEMBL-Plants: tr|I1MZ16|I1MZ16_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0076200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:14495945..14498608) extracted from Lotus japonicus Gifu genome v1.2.
GTTGAAAAGTCAACTCATTTAAAACATGTCACATTCCTACTGGTCCAAACAAGCAGAGGTACCACACCCTCATCTGAAAG GAGGCAATACAGCAACCACCTTGTTTGATTCTTAAAAAAATGAAAATGGAATAACTTATTATGAGTCTGCATAACTGGTA CGACGACAAGCACATTCTAGCATCAAAACGCACAGCCGTTTAACAACTGCGGCCTTGGCTACTTTCTCACCGGAAAGTGG CAACAACTCTTCTATCACCATTCCAAAGCCTCAACATGCTTTCAGGTTTCTCTCTTTACCCATTTCTTTTTCGTTCTTAG CTCGTTTCTTTTTACTTGGTATTCATGCACTCCAGTTGTTTGATGAATTTCCTAGCTGACATGATGTTGTGTAATTCACT GTTAATTTTTCATTTTAAAAAAAATTATTGGTTGGTTTATTTAATACTTTCCCTTTTGTCCATTATGCTAATTTGTAACA TCAACATTTTTTAAATCAAACTATCTATCAAAATTTATGAGAACTTTTGTTCTGGCCCTGCTGAGGAAGCATTGCTCTAT GAATCTCTTTGTTCTTGTTGTTTGAATAGAAACTGCTTCTGTAATTTGTAAACTTTTTATTTTAACAATTCATTTATTCA GTAGGAACTGCATACATGAACCATTATTAATTTTTTTTAAGTCATTGCAAATCACCATTCCCCAAGTTTCTTATATTCAG TTTACTAAAGGAAATATCAGAGTATACAGAATGGCATAGTTCTTAATTAATACAGTGCCTGTCATCAACTCATCTTCATA TGCATTTTCATTTTACAATCATGAAGGAGTTTTGTTGTCTAAAACTTCATTTTTTATAAAAGCTCATTTTCTTCACAATT TTGACAAGGTCATCAGGCTGTCCTACTTCTCTATAGTTTTCAAATTTATCTTCGAAGCACATATCTGACTAGCCTTTTTT ATGAGATTATCAGTGACGATGAATCTTCGATATGCTTTATGTGTAACACTGCATTTGTTTGTTGGTTCTGCTGACCTGGC AAGATATGTTGTTCTCTCTGTACAGGTTCAACTGCTGTGAGTCACTTGCAATTTAGAGCTACAAATTCCCACAAAAGACC AACTCTAGGTAATCTGATTCTTTGTTTGCTGAGTATAATGCCTTTTTTCTGGTATGTGCCTCAAGTTTTCTGAAAAGCAA ACTAGTATTTATTCCTCACGCAGACTTAATTACATGCCTTTGCTTTCGGCCTTTCATTGAATATGCTAGGGGACTGGGTC ATAATTCATAGATGAGACACTATTCAAATGTCTGAACTTATAATTTGTGTAGGTTTGAGAGGAGAGACGTTTCAATTTTC TAGCGTAAGGTTCTGTCTAAAGTATAAAGTTTCCTGCAAACTTACTGAGTTGGGAAGTGATTCATGCTTGTCAAAGGAAC TTGAAAAGAGTAAACCTTTGGTTAAGATGTGCGGCATTACATCAGCTAAAGACGCTGCTATGGCGGCCGAAGCTGGTGCA AACTTTATTGGAATGATTATGTGGCCAAACTCAAAACGTTCTGTTTCACTTTCTGTTGCAAAGGAGATATCAAAAGTTTC AAGAGATTATGGAGCGGAACCTGTGGGAGTATTTGTGGATGATGACACAGAAACGATATTAAGAGCTTCTGATGCCTCAA ACCTTGAATATGTGCAGGTATATTTTTGCCTCTCGTTTAAGTATTTTCCTTGACAATTAAATGGTTGATCTCGTTGGACA ATGCAGCTTCATGGATCTGGTTCTCGGATAGCTTTCCCGTCTTTAATTCAGGAAAATAGGGTAATATATGTTCTCCATGC AAATGAGGATGGGAGCCTTTTAAACACAATTTCTGATGAAGAGTGCTCTCAAGTTGATTGGGTTCTTGTAGATAGTGCAA AGGGTGGCAGGTTTGTATAGCTTAACCCATCTGCATGTTAGATAATGAGGCCGTGTGGATACGGACTAAAGAGCACTTAT TGAAGCTTATGTACTAAAATACATTAGATAAGCTCCAAAAAGTGCTCTTTGGTTCGCAGCCAAACGGGCTCAATCTCTTT TTTTCTGCATGGTAATATCTTGGTACTCATTAGAGAACTTCCTTGCAGTGGCAAAGCGTTCAATTGGGCGCAGTTTAAAC TACCAAAAATTAGAAGTAAGCAAGGTTGGCTCTTAGCAGGAGGGATCAATCCAGAGAATGTTTCTGAGGCTATATCTACT CTCAAACCTGAAGGGGTGGATGTCAGTAGTGGCATTTGTGCATCAGATGGAATCCAAAAGGATCCAGCAAGAATAGCTTC CTTCATCAATGCAGTGCGTTCTGTTCAGTATTGATTCACCTGATATTATTATGAACCTCAAGTAAGGACATGTTGTAATT TTGAAATATCTATATGATGTCTTGTTACAATATTATTATCTAAACCAATAATGTCTCCCAAGTTTTCCTTCATGGAAGCT GTTTTCTTGGGTTTAGAAATAAGTTATGCTGGGTGAGAGTACATGGATACACAAGTTAGTTATTACAAATTTGAACTTAG AATAAAAGATGTTGCTTTTCCTTTACCATCTCCACTTCTTTCTTGAAAAGAATGTCTTGTCATGTTTTTCCTGCTTATCT CTAAATACGAGATCTCTTTGCAAG
CDS sequence (LotjaGi6g1v0076200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTTCAGGTTCAACTGCTGTGAGTCACTTGCAATTTAGAGCTACAAATTCCCACAAAAGACCAACTCTAGGTTTGAG AGGAGAGACGTTTCAATTTTCTAGCGTAAGGTTCTGTCTAAAGTATAAAGTTTCCTGCAAACTTACTGAGTTGGGAAGTG ATTCATGCTTGTCAAAGGAACTTGAAAAGAGTAAACCTTTGGTTAAGATGTGCGGCATTACATCAGCTAAAGACGCTGCT ATGGCGGCCGAAGCTGGTGCAAACTTTATTGGAATGATTATGTGGCCAAACTCAAAACGTTCTGTTTCACTTTCTGTTGC AAAGGAGATATCAAAAGTTTCAAGAGATTATGGAGCGGAACCTGTGGGAGTATTTGTGGATGATGACACAGAAACGATAT TAAGAGCTTCTGATGCCTCAAACCTTGAATATGTGCAGCTTCATGGATCTGGTTCTCGGATAGCTTTCCCGTCTTTAATT CAGGAAAATAGGGTAATATATGTTCTCCATGCAAATGAGGATGGGAGCCTTTTAAACACAATTTCTGATGAAGAGTGCTC TCAAGTTGATTGGGTTCTTGTAGATAGTGCAAAGGGTGGCAGTGGCAAAGCGTTCAATTGGGCGCAGTTTAAACTACCAA AAATTAGAAGTAAGCAAGGTTGGCTCTTAGCAGGAGGGATCAATCCAGAGAATGTTTCTGAGGCTATATCTACTCTCAAA CCTGAAGGGGTGGATGTCAGTAGTGGCATTTGTGCATCAGATGGAATCCAAAAGGATCCAGCAAGAATAGCTTCCTTCAT CAATGCAGTGCGTTCTGTTCAGTATTGA
Protein sequence (LotjaGi6g1v0076200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSGSTAVSHLQFRATNSHKRPTLGLRGETFQFSSVRFCLKYKVSCKLTELGSDSCLSKELEKSKPLVKMCGITSAKDAA MAAEAGANFIGMIMWPNSKRSVSLSVAKEISKVSRDYGAEPVGVFVDDDTETILRASDASNLEYVQLHGSGSRIAFPSLI QENRVIYVLHANEDGSLLNTISDEECSQVDWVLVDSAKGGSGKAFNWAQFKLPKIRSKQGWLLAGGINPENVSEAISTLK PEGVDVSSGICASDGIQKDPARIASFINAVRSVQY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 30 | 275 | 246 | 1.3E-115 | – | |
Gene3D | 64 | 275 | 212 | 1.1E-57 | ||
Hamap | 66 | 273 | 208 | 31.255 | ||
SUPERFAMILY | 67 | 272 | 206 | 8.79E-51 | ||
Pfam | 68 | 268 | 201 | 3.0E-42 | ||
CDD | 68 | 270 | 203 | 7.48633E-65 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
Molecular function | Phosphoribosylanthranilate isomerase activity | Catalysis of the reaction: N-(5-phospho-beta-D-ribosyl)anthranilate = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate. | ||
Biological process | Tryptophan metabolic process | The chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid. |
Expression pattern of LotjaGi6g1v0076200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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