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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0082600 |
| Transcript ID | LotjaGi6g1v0082600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinesin-like protein; TAIR: AT3G56210.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q5VQ09|KINUB_ORYSJ Kinesin-like protein KIN-UB; TrEMBL-Plants: tr|C6T450|C6T450_SOYBN Armadillo/beta-catenin-like repeat protein; Found in the gene: LotjaGi6g1v0082600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:16102240..16106400) extracted from Lotus japonicus Gifu genome v1.2.
AACAAAGATAATTTCTCCCTGCCATGCTTGGTCACCGTGATACACATCTGCTTTGGCCTTTAGCTCCTCACCCACCACAA ACATTGTTTGTGTTTTATGTAGCAAGCAAATTCAATGTGCTGAGGTTGGCGCTTGCCTTTAAATATGATTGTGTAAACCA ATAGCATTTTATAGTAATTTTTAAATTCCAATTACTATAATTTATTTCAAAAGCATATATCATAAAGTAATTCCTAAATT TAATAATTCAATTATAAATACTATTACATATTATATCAAAATCAATAGGATAAAAATCATTTACATTTATAAGTCTCGAG AAAGGTGAAAAACACCAATTCGATTACCCCCTCTTCAAATGTAAACAAAACAAACCCCTTTATCCACAACTGCAGCATCT TCATCGGAAATCAGCAATTGCATCCGATTTCGCACCATGCGCACCCTAGCAGCTCACCTCTCTAACGTAAATCTCTCTTT ATTCATTAACAACTCCATTTCAATTTTCGACTTCAATTTTCTTCCAATCTACCGTTTTTGCAGTATTTATTCAGAACAAG AAATGGGGTCAAGATTCAATCTCGTAAATTTTCATCACCTAGTGTCAAAGGTATCTCGCGTTTTTTTATATTTAATCACT GTGTCAAATTCTGAAACTGTCAAAATTTAAATACAAAGATTCTGTGAATTATGTGTGAATGAACTGCAATTTTGTTGGTT GATCAGATCAGCTTACTGCTGAGGAAGAATTAGAAGCTCAGGAAAAAGCTGGCTGGCTATTGAAAACCATATTTTTCGTC ACCGCAGGCGTTGCTGGATACCATTTCTTTCCTTACATGGGTATTCATAATCCATCTAATTTTCAGCTTATGCAGGCATT TGCTTACTGTTTCTGGTTCAAGGCTGAATGTGTTGTTCAAATGAAAATTTTCAGGAGATAATTTGATGCAGCAGTCTGTG GCGCTTTTGCGTGTCAAGGATCCCTTGTTTAAAAGGATGGGAGCTTCTAGATTGGCCCGTTTTGCAGCAGATGGTAATTT GCACTATCTATTGAATTTGAAGTCTGTTTAACAATCTGTGACCTAGGAACATATATTGGAGCACTTTGTGCTGTGTTTGT CATTTGAATATTAGTTTGTTTGTTCTACGTAACAGTTTCGTGCTCTTGCTACGAGTATAATTTCAGTATCCTTGTGCTTG ACATTAGTGATATATAGTGAATACTGAATAGTGCGTGTTTAGTACATGGTGGAACACCACAGTGAAGCCAAAATCACGGT GGACAGAAGCCATTTACCGTAGCTTTTGCGAGAGTCCTCCTTGATTTTGGCCTCACCATCTTTTTCCATTGTGTATTCAG ACATGCACTTTATCTCAGCCTTTCTTGAGATGACAGATTTCTGGTTAAAGGGATAAGTTGATGGGAGATTTTAAACTTAG ATAAGAGTTATAGAATGAGACTTTGTGCTTGATCTGATCATGAAATAGTTACTGAGATTTTAGATGTAGTTCTAAAAGTC TTACCATGTTCTAAAGTGTCATTTTTTGATTAATTTCACTTTTATCCCTCTATTTGGGATAGTGTGTGATTTTGATCTTC TAAGTTTTTTTGTGCCAATCAAAACCGTCTATCTTTAAAGTTCAACGATTCTGATTCTGGTGTCAATTTCTTCTACCTAA AGTTCTCAAACTCTCATTTTCCATCCAAATAGGTCTGAGATATTTGGGATGTGAAATAATTTTAGAACTGTAGAATTTAG AAATTCAGTTAAGTTTTTATCAAATATGAAATTTGGAATGATTAAGAGGATGCGAAATTAAGGTTTTACAGCGTAGAAAA ATCAATTTTTTTTGGTGAATGTGATATTTTTTTTGGTAAGTTTTAAGCTGAAGGAGGTCTGATCCATTCAAATTTGACCT TTTGATCATTTTTAGAAGAAAATGAGAGTTTGAGAGTTTTTAGTAGAAGGATAGTGATGGAGAGATTGGATTGTTTTGTA ACAATTAAAAAATTGAGGTCTTAAATTCGTTCAAGAATAATATTCGGGACCAAAATCCCAAGTTAGTTATAGTAAAGACT AGAGGGACTGGAAAAGCAATTATGCCTAATATTTGTCATGACTTAGCACAAATGTTTCAATGATTTAAACTGTGTTCTAT TCCATAACTGACATATTGCCTTGATGTGACTTAGGTAGTTTGCACATTAAGTAGCTACTTATTGACTGATTACCTTCTGT ATGCTCAGAATGTTTTATAATTAAATAATTATCTATCTATAGTTTTTCAATGTACCAATGGATATTGGATATGTATCTCA TGGAAATGGTTAACAAAATTGTTCACCTTCCTTTTGCTCGTAAGATGAAAGAAGGATGAAGATAGTCGAGATGGGTGGAG TTCAAGAGCTCTTAAATGTGTTAAGCACGGCTAAAGATGACCGAACACGGAAAGAAGCGTTAAATGCTCTTGCTGCACTC TCACAGTCAGGTAGCACTTTAACGTTTAATCTTTAAATATTACATTTTGGTGTTCTTTTATGCATAAAAACTCATTTTAT TTTCTAATCAGACTTTTTGTTTTAATATGCTTACTAACATGCTCTTGGAGAGCTAGATTATTGAGACCAATAGTAACTTT GTGGTCCTAAAGACTTCATTTGTATGATATTCTAGCTGGAAGTTGACAATAGGAGCAAAGCGTGCTTAGAAAACTATTAC ATGTTTCATGTATGTGCCATCTTTAAATTCTTATTCAGTTCATAAGGGCTTGTAAAGATGAAAATGAACATAACTTGTTT GGACATTGATTTTTGGACATTATATGCATGAGAGCTCAGGTGTATTTATATGACAATAACACCTGTATATTATCAGGTCA ATATATTTGAATATTAAAAATCCAGTTCAAAAAATATTCTGAGGTTGAATGATATGAAACAGTACAACCAAAGTGCTGCT GTGTCTTCTTTTCTGTTTTCTATTAATCGAGACAAAATACTTCATTCCTACAGATGAAGTTCTTGCATCCTTGCATCGTG CTGGGGCCATTTCAATTATCAAGTCTGCACCAAATTCACTTGAAGATGCAGATATTGAGAGATTCAAGTTGAGCTTGATG AAAAGATTCCAAGACCTGAAGTATGATGTGTCATCATAGCTTTACCTTGAGGTGCTTGCCTTTTTTTTTTCCCGATTAGC TTGGATTATGAAAAGTCATGTTAGACATTTTTGAGGAAGAGTGGAGAAATTACAGTGTATCTTTTGATTAAATCTAATAG AATTTTATATTATAGCTCAATTATGGTTTTGGTTTTTTTGACTTATCATGTGCAAGTTGGTGCTCAATACTCATAGTTAT TCCAGCCTTGTGTAATGGCCAATTCTTTGTTACTAAGGCTTCTTTCTCGTAGGAAAATAAATTCTTTTACGATCATCCCT TTTGTAGAGACTAAGGTATTGCACATTTAATAATCATGGGCATTTTGAGCTGCGTTGTTCATGTTTTTCTCTCAACTCTA CAATGAGGTATCAAGGAAGAACCCCATGATTCTAGTTGAGATTTCTGATATATCAGAGTCCAAATCTAGCTTAATCTGTG TTGATAGTTTAAGGGGGTGTCTCTGAATTTTCACTCAGCTTTTTGAATGATAGTTTAAGGGGGTTTCCTACCAATGATTT TGGTCTGACTCGTTTGTGCGCTCGTGAAAATTTCATTTGCAGTTCTGCAATGCACTGCTTTTATTTATATGTTCTTATCT CTGGAGGAAACTCCCCACCTAAGAAATTGAAGCCATCTGCCAGCGTCGGATGATGAGATAATCAAGGTCATGTTGGCCTA TAGAATGTGGAAGATGTAATTTTATATACCTTTCTGTGAATTTAAATAAGGTTGTAAGTTAATTTGCAATTGGCCATGCC ACTTTGGTGAATGTAGGTCATCAAAGTGGTGCCAATGTGATTTTCGCATTAGATTATTCCTAGGCATTTATTGGATTTAA TACTTGCAATGTGAAATTTGATGGGAAAGTTCATTTGCTTGTTACAGCTACATAGTTTCGATACTACTGCTGACTGCAGG CACATGTATTTGAGGGTAGTATTTCGTACCAAAATCACATGGGTTGTGACATTCATTGACTATTTAAGTTCCAAATTTGA G
CDS sequence (LotjaGi6g1v0082600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGCACCCTAGCAGCTCACCTCTCTAACTATTTATTCAGAACAAGAAATGGGGTCAAGATTCAATCTCGTAAATTTTC ATCACCTAGTGTCAAAGATCAGCTTACTGCTGAGGAAGAATTAGAAGCTCAGGAAAAAGCTGGCTGGCTATTGAAAACCA TATTTTTCGTCACCGCAGGCGTTGCTGGATACCATTTCTTTCCTTACATGGGAGATAATTTGATGCAGCAGTCTGTGGCG CTTTTGCGTGTCAAGGATCCCTTGTTTAAAAGGATGGGAGCTTCTAGATTGGCCCGTTTTGCAGCAGATGATGAAAGAAG GATGAAGATAGTCGAGATGGGTGGAGTTCAAGAGCTCTTAAATGTGTTAAGCACGGCTAAAGATGACCGAACACGGAAAG AAGCGTTAAATGCTCTTGCTGCACTCTCACAGTCAGATGAAGTTCTTGCATCCTTGCATCGTGCTGGGGCCATTTCAATT ATCAAGTCTGCACCAAATTCACTTGAAGATGCAGATATTGAGAGATTCAAGTTGAGCTTGATGAAAAGATTCCAAGACCT GAAGTATGATGTGTCATCATAG
Protein sequence (LotjaGi6g1v0082600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRTLAAHLSNYLFRTRNGVKIQSRKFSSPSVKDQLTAEEELEAQEKAGWLLKTIFFVTAGVAGYHFFPYMGDNLMQQSVA LLRVKDPLFKRMGASRLARFAADDERRMKIVEMGGVQELLNVLSTAKDDRTRKEALNALAALSQSDEVLASLHRAGAISI IKSAPNSLEDADIERFKLSLMKRFQDLKYDVSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 48 | 48 | - | – | |
| PANTHER | 9 | 193 | 185 | 4.5E-87 | – | |
| Phobius | 49 | 67 | 19 | - | – | |
| Phobius | 68 | 193 | 126 | - | – | |
| Gene3D | 71 | 182 | 112 | 7.1E-12 | ||
| SUPERFAMILY | 73 | 164 | 92 | 3.76E-11 | ||
| SMART | 103 | 144 | 42 | 0.0018 | ||
| Pfam | 104 | 140 | 37 | 2.7E-4 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0082600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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