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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0083300 |
| Transcript ID | LotjaGi6g1v0083300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Non-specific serine/threonine protein kinase; TAIR: AT5G58380.1 SOS3-interacting protein 1; Swiss-Prot: sp|Q7X996|CIPK2_ORYSJ CBL-interacting protein kinase 2; TrEMBL-Plants: tr|K7LRS9|K7LRS9_SOYBN Non-specific serine/threonine protein kinase; Found in the gene: LotjaGi6g1v0083300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:16364011..16366507) extracted from Lotus japonicus Gifu genome v1.2.
TTTTTTTTTTTTTTTACATCAGAAAAGATTTCCGATTTAATAAGACACATAAATTTCAATTGTAAAGTGTTGAAAAGACA GTTTTAAATAAATGTCGACAACAGTCCTCTATTTGTATTTTAACCAAAGTGGAACACGACACTATGACACTGCCTTCATA ACAAGCTTTTCTTGCTCCTTAGAATAACACTACGTGCCTTTTCGTCTGTAACGTTTGGATCACTTCAACGCTCTCTCTTC CCTTTAAACGGTAAGCTTTTTTTTTCTGCTTCTCCCTCTTCATTCTTCAGCACCTTTTTCTTGTCATCCTAAGCCTGTTA ATGTCGGAATTACTTAGTTTTTTTTTTTCTAAATTCTTGTTTTGATGATCGATCAAGAGAAACTGAGCATGACCCTTTTG GCTTTGCTTTGTTTTTATGTTTTCAGATGATCATCTGATTAAGCTCTAACCTTGTGAGTGTCCAAAGTTTCAATTTTTTG CAACACCCTTCTCAATTTCTGTTGATATTTTCCATGAATTTGTTTCTCTACTAATTCAACTTCATAATTGTCATGTCTTT GCTTTGGAACATTCATCATCTGATTACTGTTTAAATAGTTTCCCCCCCCTTTAAAAGTGACATCTTTAGGTGATTTTATG TTTTGCTCTCAGGGGGAGCAATTGAAGTGACACACTCTCTGAAGCCTATGTGTATCAAACTGTATTTGTTCGTGGCTTCT AGACCAGGTTAGAGAATCACCTGCAAGACTAATCAATCTCATTTTATTAATGCACAGAAAAATTTCTGTTCACAAAACCT TGACAAAGAATGGTTCCTTGAGTACTTAATTGTGTTTGAGGGTTTGTGCCTGAAATGGAGAAAAAGGGGAAGGTACTGAT GGAGAAGTATGAGTTTGGGAGACTATTAGGCAAAGGAAACTTTGCAAAGGTGTACCATGCAAGGGACATTCGAACCGGTG ACAATGTTGCAGTTAAGGTTATTGACAAGGAGAAAGTCCTAAAACTTGGGCTGATGGATCAGACGAAGCGCGAGATATCT ATTATGAGACTGGTTAAACACCCAAATGTTTTGCAGCTTTATGAGGTCTTGGCCACCAAAACCAAGATTTACTTCATCAT AGAATACGCAAAAGGGGGTGAGCTGTTCAACAAGATAGCGAAAGGTAGGCTCCATGAGAACATGGTGAGGAAGTACTTTC AACAATTGATCAGTGCTGTTGATTTTTGCCACAGGAAGGGTGTTTATCACAGGGATTTGAAGCCGGAAAACTTGCTCTTG GATGAGAATGGAATTCTCAAAGTAGCAGATTTTGGATTGAGCGCACTCGTTGAATCTCATAGCCGAGGAATCATGCTTCA CACAATGTGTGGAACTCCTGCATATGTTGCTCCTGATGTTATATTATGCAAACAAGGGTATGATGGAGCAAAAGCTGATA TATGGTCTTGTGGAGTGATCTTATTTGTCCTTTCGGCCGGTCATTTGCCATTCAATGATTTGAATATAATGGCACTGTAT AAGAAAATAGGCAGGGCAGAATACAAATGTCCAAAATGGTTTTCATTTGAAGTGCGCCGGCTATTAGCGAGGATCCTTGA CCCTAACCCGGATACTAGGATAACCATGGCAAAAGTTTTACGAAATTCATGGTTCAGAAAAGGATTAATTTCCAAATCTT TTCAAGTGATAGGAGAGGTTACCGATGCGGCTTCAGCTGATTCTGAAGAAGCTCTTGCCTTTTCTGAGAATGGAGGCGAG GCACATCAAGCATTGCTTAGGCCTACATCTTTAAATGCTTTTGATATAATTTCTCAATCCGTCGGGCTTGACTTGTCTGG CCTGTTTTCAAACAATGATGAAAACGACTTAGATGAGGATATCAAATTTACATCTACGAGCTCTGCCATGTCTATCATGT CAACAATGGAGGATATTGCGCACAACCTGAGTATGAAAATAATGAAGAAGGATGGGGGGTTGCTGAAATTGGAGAGATCC AGAGAATTTAGAAAAGGGCCACTTTCCATTGAGGCTGAGATTTTTGAGTTCACTCCATCATTCCATTTAGTTGAGATAAA GAAATCATCTGGTGATACTCTAGAATACCAGAAGATATTGAAGGAGAATATAAGACCAGCTCTAAAAGACATTGTCTGGG TTTGGCAAGGTGAGGAGGAGCAAGAGATGTAGCAAGGTTTTCTTCTCCATGAAAGATTCATTAACTTCATATTCTGAATT ACTTCTGTGACAAAGATACCATGGTAATTGAACTACTGATATTTTATACCATGGTAATTGAACTATTGACAAAGATATTC TGAATTATTCTACATGGTTTTTCTTGAGAATTATGCCTGCGGAAGTATAAACGGTCATTAATCATACCATTCTTATAAGA TGTCATTATGTCATACTTTATTTACATGAATTTTGTATAGAAAATGATGGCTTAATACTACTGATTGCTGAATCAAACTT TCGTTTGTAATAAATGA
CDS sequence (LotjaGi6g1v0083300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAAAAGGGGAAGGTACTGATGGAGAAGTATGAGTTTGGGAGACTATTAGGCAAAGGAAACTTTGCAAAGGTGTA CCATGCAAGGGACATTCGAACCGGTGACAATGTTGCAGTTAAGGTTATTGACAAGGAGAAAGTCCTAAAACTTGGGCTGA TGGATCAGACGAAGCGCGAGATATCTATTATGAGACTGGTTAAACACCCAAATGTTTTGCAGCTTTATGAGGTCTTGGCC ACCAAAACCAAGATTTACTTCATCATAGAATACGCAAAAGGGGGTGAGCTGTTCAACAAGATAGCGAAAGGTAGGCTCCA TGAGAACATGGTGAGGAAGTACTTTCAACAATTGATCAGTGCTGTTGATTTTTGCCACAGGAAGGGTGTTTATCACAGGG ATTTGAAGCCGGAAAACTTGCTCTTGGATGAGAATGGAATTCTCAAAGTAGCAGATTTTGGATTGAGCGCACTCGTTGAA TCTCATAGCCGAGGAATCATGCTTCACACAATGTGTGGAACTCCTGCATATGTTGCTCCTGATGTTATATTATGCAAACA AGGGTATGATGGAGCAAAAGCTGATATATGGTCTTGTGGAGTGATCTTATTTGTCCTTTCGGCCGGTCATTTGCCATTCA ATGATTTGAATATAATGGCACTGTATAAGAAAATAGGCAGGGCAGAATACAAATGTCCAAAATGGTTTTCATTTGAAGTG CGCCGGCTATTAGCGAGGATCCTTGACCCTAACCCGGATACTAGGATAACCATGGCAAAAGTTTTACGAAATTCATGGTT CAGAAAAGGATTAATTTCCAAATCTTTTCAAGTGATAGGAGAGGTTACCGATGCGGCTTCAGCTGATTCTGAAGAAGCTC TTGCCTTTTCTGAGAATGGAGGCGAGGCACATCAAGCATTGCTTAGGCCTACATCTTTAAATGCTTTTGATATAATTTCT CAATCCGTCGGGCTTGACTTGTCTGGCCTGTTTTCAAACAATGATGAAAACGACTTAGATGAGGATATCAAATTTACATC TACGAGCTCTGCCATGTCTATCATGTCAACAATGGAGGATATTGCGCACAACCTGAGTATGAAAATAATGAAGAAGGATG GGGGGTTGCTGAAATTGGAGAGATCCAGAGAATTTAGAAAAGGGCCACTTTCCATTGAGGCTGAGATTTTTGAGTTCACT CCATCATTCCATTTAGTTGAGATAAAGAAATCATCTGGTGATACTCTAGAATACCAGAAGATATTGAAGGAGAATATAAG ACCAGCTCTAAAAGACATTGTCTGGGTTTGGCAAGGTGAGGAGGAGCAAGAGATGTAG
Protein sequence (LotjaGi6g1v0083300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKKGKVLMEKYEFGRLLGKGNFAKVYHARDIRTGDNVAVKVIDKEKVLKLGLMDQTKREISIMRLVKHPNVLQLYEVLA TKTKIYFIIEYAKGGELFNKIAKGRLHENMVRKYFQQLISAVDFCHRKGVYHRDLKPENLLLDENGILKVADFGLSALVE SHSRGIMLHTMCGTPAYVAPDVILCKQGYDGAKADIWSCGVILFVLSAGHLPFNDLNIMALYKKIGRAEYKCPKWFSFEV RRLLARILDPNPDTRITMAKVLRNSWFRKGLISKSFQVIGEVTDAASADSEEALAFSENGGEAHQALLRPTSLNAFDIIS QSVGLDLSGLFSNNDENDLDEDIKFTSTSSAMSIMSTMEDIAHNLSMKIMKKDGGLLKLERSREFRKGPLSIEAEIFEFT PSFHLVEIKKSSGDTLEYQKILKENIRPALKDIVWVWQGEEEQEM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 441 | 441 | 3.7E-234 | – | |
| PANTHER | 1 | 441 | 441 | 3.7E-234 | – | |
| SUPERFAMILY | 4 | 274 | 271 | 2.83E-88 | ||
| Gene3D | 8 | 93 | 86 | 3.3E-29 | – | |
| ProSiteProfiles | 12 | 267 | 256 | 52.004 | ||
| SMART | 12 | 267 | 256 | 3.1E-99 | ||
| Pfam | 12 | 267 | 256 | 6.0E-69 | ||
| ProSitePatterns | 18 | 41 | 24 | - | ||
| Gene3D | 94 | 274 | 181 | 3.0E-60 | – | |
| ProSitePatterns | 130 | 142 | 13 | - | ||
| Gene3D | 308 | 436 | 129 | 4.6E-40 | – | |
| ProSiteProfiles | 308 | 332 | 25 | 12.993 | ||
| Pfam | 310 | 371 | 62 | 8.5E-19 | ||
| CDD | 314 | 431 | 118 | 1.2805E-42 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi6g1v0083300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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