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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0095100 |
| Transcript ID | LotjaGi6g1v0095100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-galactosidase; TAIR: AT3G26380.1 Melibiase family protein; Swiss-Prot: sp|P14749|AGAL_CYATE Alpha-galactosidase; TrEMBL-Plants: tr|I1LNG1|I1LNG1_SOYBN Alpha-galactosidase; Found in the gene: LotjaGi6g1v0095100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:20532877..20538961) extracted from Lotus japonicus Gifu genome v1.2.
CCCATAACGAAATTGTCGTATTTATTTGTATGAGCGGGCACGCGCCTGCCCCTCACTTCACTTTGGCTTGTACCTGCTGG CTTTGATCATGTCATTGTCGTTCCGCCGCGAATGAAACAAGACCGCACGTGTGAAACCGACTCCCTGTTAACAAACAAAT TCTTATGCTGAACTGGACTCCACAAATTCTTCAGCAGTGTAATTAAATTAGATAAGATAATTAATAAACTAGAAGAAAAA TGGAGATTAATTAATTGATTAATTAGTAAGTAGTATATTTATTAAACTCTGTGTGTGTGTTTAAGTTTGGTGTTAGTGGA ATGGAACAGCCACCACGAAGGAAGGAACTCAAGTACTGAACTTAGCAATCATGAAGTACTGTTTCTCCTTATCCTCAACT CTCCCTCTCTGCATTCTCCTCACTCTCTGTTTTCACAGGTATTTCTCAATTTCTCTTGCTACCATTTATTTGTTTGCGTG TTTCGATCATCTTTTCTGGTTAATTGCACAATTCAATCCAAAACACATGCTGTTGATCTTATGGTGGGTTGCTTTTTCAA TTCTAAATATAGAAACTATCTCAGAACACTGTATGACAAAAGCTGGTTTGAATGCTTGTCATATTTTTATGGTAATCAGG GTCTTGGTCTCACTTTGTCTTTAGGGCTTTTACTACATGAAGTCAAGTCCTCAAGCATAAATGTTATTTTGACTTTGATT TATGGATTTTAAGAGGCAGAAACTCTGTATAGAGTGTGTTTGGTTCTTTAGTTTTTTACTGAGAATAATTGATTCCAGCA TCTATCATGATTATCATCATATATATATATATATATATATATATATTGAAGTTTGAATTGCTATATTAAGTAAGGTGATG TCACAAGATCGAACCCCAGAAAGTCATTTGTTGGGAGGGACAGTCACCGTATCCCAAACAAGTTAACACGTGCAAGGACA AAAAAATGACAAACCCTTCAATTTGGAACTGTGTTTATTGAGTAACTTTATATCTAATAAGAGTGCTTCAATTCTGTCCA AACTGATAGATTAAATTGAAGAATTTAGTAACTGTACATTGATAGTCTAAACAAATTTTACATAGAATATCTTGCCTTCT TGGTCCTTTTTATTTCTTTTAAATTTTAACTTAATTATAATATGACAATATAGTCAAATACGATGGCGTATCGGTGTAAA ACTTGTTTACACTGTCAATTTTATGGTTATTAAACTATAAATTGTATCTTTATTTGGTCCTGTTATTATTTGCATGACAT TAGACAAATAAGTTGATTTATGTCTAAAAAATTGTCAGTCTGTGTTATTTCAGTGTGTCATCTAAAAATGTATCTGAGAG TGACCTACAACAAGCTACCATCCCACCAAGAGGTTGGAATTCCTACGATTCCTTTTGCTGGACAATTTCCGAAGAAGAAT TCTTGCAGAATGCCGAAATAGTTTCTCAGCGTCTCCATGATCATGGATACGAGGTATAGGTTCTCTGAGGAACCTTATGT TAAACATGTGAGCACTGCTTTCATTTAGATATACTCATTGTAACTTCGCTTCAAACATTTGTAGTATGCTGTGGTGGATT ATCTATGGTATAGAAGGAAAGTCAAGGGTGCTCATCATGATTCTCTTGGGTTTGATGTGATTGATGAATGGGGGAGGATG ATTCCTGACCCTGGAAGGTGGCCTTCTTCCATAAAAGGGAAAGGGTTCAGCGCAGTAGCTGATCGAGTACATAGCATGGG TTTGAAGTTTGGTATTCATGTTATGAGAGGGATAAGCACACAAGCAGTCAATGCAAACACCCCTATCCTTGATACAACAA CGGTATTGCTTTGTTTCTGCTATACTTGTTTATATTTATTTCTTGCTTTTTATTCAAGGTAGTTTAATTTAATGGATGCC CTATCTTGCACATTTGATCTAAATGAAACATTACAAGTAAGATATCAGGATATTATTTTACCTTAATCCAAAGCTTCTTA TCGACCTTTGGTTTCCTCCTCTTTTGATTTCTTAGGGAGCTGCTTATCAAGAATCTGGTCGAGTGTGGCGTGCAAAAGAC ATAGCAATTCCGGAAAGGGCTTGTGGATGGATGTCTCATGGTTTCATGAGTGTAAATACGCAGTTTGGAGCTGGGAAAGC TTTTCTGAGGTCCCTTTATGAGCAGTATGCTGCATGGGGTGTTGATTTTGGTACTTCGACAACTATTTTATAGTCTGTTT AGTATATTCTATCACAACAGATTTATGTGATTGACAACAATCATGATGATTTTAAACAATATTGTATCAGTCAGCTTCAC CAACTTTGGTTAAGTGAAGCATTTTGTACTTTCTTTTGCACATTATTTCTACTGTTTCACCAACAGTGTAGTTCTTCCTT CCTTTCGCATTAAACTTGAAAGATTTTCTACTTCCCTTGCAGTGAAGCATGACTGTGTATTTGGCGATGACTTGGATTTA AATGAAATAAGTTATGTATCTGAGGTATTCTGCAGTTCTGCCTCCCCTCCACCCTCTTGTTATTCTCAGCAAACTTAGGG GGCTAGTTCGCCCCATTGAAATTTGTTATATTATGGAAGATTCATCAGCAAACTTTCCGTATGACACATTATTCCAGGTT TTCAGGGAGCTAGGTCGCCCCATCGTATATTCTTTGTCTCCTGGAACGAGTGTGACACCAGCCATGGCCAAGGATATTAG TGGACTGGTCAATATGTACCGTATAACAGCGGATGACTGGGATAATTGGGGAGATGTGAAAACTCATTTTGATGTAACAA GGTGGTTAAATTGTTGTATTTTAGTTTAAAATACTCGTATTTTAGCACCTTGCAATTATGTTGCTCTCAATCTGTGATCT CTCACCATATCATATTAATTTAGTTCATTTCATTCTGGATCAGGGATTTTTCAACTGCTAATATGATAGGAGCTAAAGGT TTAATGGGGAACTCCTGGCCAGATTTGGACATGCTACCCTTTGGATGGCTAACTGATCCAGGTAATAAGGCTGTGCTGCA ACTTTTGCTCGTACATGTATGAATATCATGAACCTTATGCTTTTAATCAGTTAGTGATACTGTGAAGGTTCTCAATTAGG GGTTTAAGGTTCAACAATCCTAACAGATAGTGACCAGCAATGTACCTATCGACCAAATCACTTCACTTATTCATTATTCA TTTCTCTTTTTCTATCTTCTACCCATCTTTATTATTCTATATATTATTTCATGTGAAACAAAAACCCCTGGGATTGTGAA TAATGATCTTGAGCTATACCATGATTCCATTCTATTAAAATGAGGACATTGCTGGTGCTGTGGTGCAGTAAAACTGTTTG CTCCTCGATGATGTTTACAATCTCATATCATAGAAATTCATAAAAGCTGTTTGAATTTGAACTTATGAGATATGACGCTG CATTTTCACCTCTTTTTTTGTGTAAAGGCTCAAATGAAGGTCCACATAGATACACTAATCTCAATCTACAAGAGCAGAGG ACACAGGTACTCATAAAAGCATAACTGAGTTGCTTTTGCATATATTCATATGTTAAATGTGCTTATAATTATTATCAAAA CACACTGAATGAATGTATTCGTATCCCTCAGATGACCCTGTGGTCTATGGCAAAGACTCCCCTTATGTATGGGGGGGATG TACGGAAGATTGACTCGACGACGTATGATCTTATCACAAATCCTACCCTTCTGGAGATTAATTCTTTTAGCTCGAATAAT ATGGAGGCACGTGATCTATATAACCTTTTTTTTGTGTTGAGAGGGGGGATAATAATGTTTGTCAAATTAATATCATATTT CTTTTGCTGCATTGACAGTTACCTTATATCAAAATCCTGAAGAGTGAAGATCAGGATCTTGGAAGGCAAATGAGAAGAAG CTACAGAGAGAAGGAAACATCATACAAATATTCATTAGGCCTCACTAGCTGTTCGGAGTCAAAGGCTAGTGGTTGGACCA GTGAAAGTTATAACGGATATCTTGAAAGAATCTGCTGGAAAAGGAGTTTCAAAAACAAGCATCTTGCCCCTTTCTGTGTT CAAAAGAGAGAACTTAACTTGACCTTGTAATCTTGCTTCATCTCTCTGTTCTAATTGCCTAACTTTAATTTGAGTATTTA TGTTGTTTTTAATAACAGAAATTGTTATATTGATACTGATATAGCAAAAAGGAGAGTATGTATCACGAGGATCGTCAACG TGGACATCATTTAGTTGCAGCCAACCGGATAAAGTTTTGCTTGGATGCTTCTCCAAGACGAAAGCTTAGTTCTCTAGAGT TTAGGAGATGTACATTTTCTCCCTGCAGATTGGATTCAAATCAGGTATGTTATAATCAGCTAGCCAATGTGTAATTTTGG AGTTCTTCTCCGGGGAGGATATAATTCCAAACCATATGCCTGTCTGTCTACATGAAATGAACTTTAGATTTGCATTTTAT TTAACATTTGTGTTCTATTGGAAGTTGATTTATGTAGTATTTTAACAGATGTGGGAGTTGAATCCTAATGGGACCCTGGT AAATAGTTATTCTGGCTTATGTGCAACTATGGAGTCTGTCAAAGGTGATTTAAATTTGTACCATTTTCTACAATGACATA ATTCATGAAATTTGTTGAGTTTGTCTTGGTTTTTCCTCAAGTTTATTGTTAAAAATGCAAGCTGGTAATTTATGCAGCTA CTATTACTTCTGGGGGTTTTCGCTCTTGGATCGCTACAGGAAGAGCAGGTTTGTTGCTCACAAAAGCTATAGACAACTCT AGGGAATTTTATTGTGTTTTCTGCAACTCCATTAAACAACAAAACTGAAATTGACTGATCATGGGCATTTAAGTACTTCA AAATATAAATTGTATAGTGGCAAACTACAAGTTACAAAATATTGGAAAATAAGAGAGAATGAGATGGGGTGCTGTTGTAC ATAAAGTTATAAATGACGTGACCTGGTGATAATGTAGTACATAAAGTTAGTATGAAATCAATATAGAAATACAAACTTCA AATATAAAAATAATAAACTGAGCATAGTTGGCTACACATATGCAAGTGTTAGAATTGATTTTCAGTTGACAAAATCAATT TTTGGGTGTTTAGATGTTTAATTGCATAATCGATTATAGCTCGAAAATCAATTATGTGATGAAGCTACAAAGAAATATTA TATTTTCTAATTCCTAGTTTTTGTATATCTTAACTTTGTAGGAAAAGTCTATGTTGCTTTCTTCAATCTAAGTGAACAAA AGGCGGTGATGTCTGTGCAGACATCAGACCTGGCTAAGGTTCTTCCAGGCAAAGACTTCAGTTCTTGCAAGGGCAGTGAA ATATGGAGTGGAAGTGACACAGTAATAATGCAGGGGACGTTATCAAAGGCAGTGGAAGTGCACGGAAGTGCACTATTTGT TTTAAATTGTGACTAGTTTGGCCCCAAAAAGAGGACGGAGTTGGTTCACTGGTACCACCTTTCGGACTTCATGGTATACT CCAGGGATTGACAAGTTCCTATCCCCCTACTAATAGTTTAACACGCTCTTTGTTGTTACTATGAGGTCCCGAAGCATAGG GAGATTTTACCCGTTGTTGTCAATTAGGGGGTTTGTGGACTTTTAATCCTCTCCACAGTGCTTTTGGGTTAATATGTTTC ACGTGATGTCAATTTGAACTTGTCCGAGCCGTTCAATTACGGTCTTATGATGCAATTGCATTCTCTGATCCAATTGTTGT TTTTGTTTTTGTATTCATGATTTATCCAGTAGGTTAGGCTGGTTGGTTCTTTGCACCTAGTGTTGGTGTTGTTAGCTTAA CCGCAAGGAGCGGGTGCCGAAGGCAAAGCTAGCGATTGAGTGAAGTCGGCTGGATCACATCATTTTCATGAAATAGATTG GATTAATGGATAAAAAAAACAATTTCATAAAATCAAATGTTACTATTCGATCTAATAAGAGCATTCTAGTAAAATTTATA AAAGTTTATATTTCAACTTTTATTACCTATTTATATTATTTAGGTAGAATAGTGCCTATTAAATTTTAGTCATAAAATGT CAGAA
CDS sequence (LotjaGi6g1v0095100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTACTGTTTCTCCTTATCCTCAACTCTCCCTCTCTGCATTCTCCTCACTCTCTGTTTTCACAGTGTGTCATCTAA AAATGTATCTGAGAGTGACCTACAACAAGCTACCATCCCACCAAGAGGTTGGAATTCCTACGATTCCTTTTGCTGGACAA TTTCCGAAGAAGAATTCTTGCAGAATGCCGAAATAGTTTCTCAGCGTCTCCATGATCATGGATACGAGTATGCTGTGGTG GATTATCTATGGTATAGAAGGAAAGTCAAGGGTGCTCATCATGATTCTCTTGGGTTTGATGTGATTGATGAATGGGGGAG GATGATTCCTGACCCTGGAAGGTGGCCTTCTTCCATAAAAGGGAAAGGGTTCAGCGCAGTAGCTGATCGAGTACATAGCA TGGGTTTGAAGTTTGGTATTCATGTTATGAGAGGGATAAGCACACAAGCAGTCAATGCAAACACCCCTATCCTTGATACA ACAACGGGAGCTGCTTATCAAGAATCTGGTCGAGTGTGGCGTGCAAAAGACATAGCAATTCCGGAAAGGGCTTGTGGATG GATGTCTCATGGTTTCATGAGTGTAAATACGCAGTTTGGAGCTGGGAAAGCTTTTCTGAGGTCCCTTTATGAGCAGTATG CTGCATGGGGTGTTGATTTTGTGAAGCATGACTGTGTATTTGGCGATGACTTGGATTTAAATGAAATAAGTTATGTATCT GAGGTTTTCAGGGAGCTAGGTCGCCCCATCGTATATTCTTTGTCTCCTGGAACGAGTGTGACACCAGCCATGGCCAAGGA TATTAGTGGACTGGTCAATATGTACCGTATAACAGCGGATGACTGGGATAATTGGGGAGATGTGAAAACTCATTTTGATG TAACAAGGGATTTTTCAACTGCTAATATGATAGGAGCTAAAGGTTTAATGGGGAACTCCTGGCCAGATTTGGACATGCTA CCCTTTGGATGGCTAACTGATCCAGGCTCAAATGAAGGTCCACATAGATACACTAATCTCAATCTACAAGAGCAGAGGAC ACAGATGACCCTGTGGTCTATGGCAAAGACTCCCCTTATGTATGGGGGGGATGTACGGAAGATTGACTCGACGACGTATG ATCTTATCACAAATCCTACCCTTCTGGAGATTAATTCTTTTAGCTCGAATAATATGGAGTTACCTTATATCAAAATCCTG AAGAGTGAAGATCAGGATCTTGGAAGGCAAATGAGAAGAAGCTACAGAGAGAAGGAAACATCATACAAATATTCATTAGG CCTCACTAGCTGTTCGGAGTCAAAGGCTAGTGGTTGGACCAGTGAAAGTTATAACGGATATCTTGAAAGAATCTGCTGGA AAAGGAGTTTCAAAAACAAGCATCTTGCCCCTTTCTGTGTTCAAAAGAGAGAACTTAACTTGACCTTCAAAAAGGAGAGT ATGTATCACGAGGATCGTCAACGTGGACATCATTTAGTTGCAGCCAACCGGATAAAGTTTTGCTTGGATGCTTCTCCAAG ACGAAAGCTTAGTTCTCTAGAGTTTAGGAGATGTACATTTTCTCCCTGCAGATTGGATTCAAATCAGATGTGGGAGTTGA ATCCTAATGGGACCCTGGTAAATAGTTATTCTGGCTTATGTGCAACTATGGAGTCTGTCAAAGCTACTATTACTTCTGGG GGTTTTCGCTCTTGGATCGCTACAGGAAGAGCAGGAAAAGTCTATGTTGCTTTCTTCAATCTAAGTGAACAAAAGGCGGT GATGTCTGTGCAGACATCAGACCTGGCTAAGGTTCTTCCAGGCAAAGACTTCAGTTCTTGCAAGGGCAGTGAAATATGGA GTGGAAGTGACACAGTAATAATGCAGGGGACGTTATCAAAGGCAGTGGAAGTGCACGGAAGTGCACTATTTGTTTTAAAT TGTGACTAG
Protein sequence (LotjaGi6g1v0095100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKYCFSLSSTLPLCILLTLCFHSVSSKNVSESDLQQATIPPRGWNSYDSFCWTISEEEFLQNAEIVSQRLHDHGYEYAVV DYLWYRRKVKGAHHDSLGFDVIDEWGRMIPDPGRWPSSIKGKGFSAVADRVHSMGLKFGIHVMRGISTQAVNANTPILDT TTGAAYQESGRVWRAKDIAIPERACGWMSHGFMSVNTQFGAGKAFLRSLYEQYAAWGVDFVKHDCVFGDDLDLNEISYVS EVFRELGRPIVYSLSPGTSVTPAMAKDISGLVNMYRITADDWDNWGDVKTHFDVTRDFSTANMIGAKGLMGNSWPDLDML PFGWLTDPGSNEGPHRYTNLNLQEQRTQMTLWSMAKTPLMYGGDVRKIDSTTYDLITNPTLLEINSFSSNNMELPYIKIL KSEDQDLGRQMRRSYREKETSYKYSLGLTSCSESKASGWTSESYNGYLERICWKRSFKNKHLAPFCVQKRELNLTFKKES MYHEDRQRGHHLVAANRIKFCLDASPRRKLSSLEFRRCTFSPCRLDSNQMWELNPNGTLVNSYSGLCATMESVKATITSG GFRSWIATGRAGKVYVAFFNLSEQKAVMSVQTSDLAKVLPGKDFSSCKGSEIWSGSDTVIMQGTLSKAVEVHGSALFVLN CD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 31 | 31 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 10 | 21 | 12 | - | – | |
| PANTHER | 11 | 641 | 631 | 1.1E-273 | – | |
| PANTHER | 11 | 641 | 631 | 1.1E-273 | ||
| Phobius | 22 | 26 | 5 | - | – | |
| Phobius | 27 | 642 | 616 | - | – | |
| Gene3D | 30 | 388 | 359 | 1.9E-109 | ||
| PRINTS | 34 | 53 | 20 | 5.2E-8 | ||
| SUPERFAMILY | 37 | 385 | 349 | 5.27E-53 | ||
| CDD | 40 | 385 | 346 | 1.17462E-82 | ||
| Pfam | 53 | 149 | 97 | 2.7E-5 | ||
| PRINTS | 128 | 149 | 22 | 5.2E-8 | ||
| Pfam | 205 | 385 | 181 | 6.8E-13 | ||
| PRINTS | 343 | 364 | 22 | 5.2E-8 | ||
| CDD | 499 | 547 | 49 | 2.05987E-4 | ||
| SUPERFAMILY | 499 | 552 | 54 | 2.15E-6 | ||
| ProSiteProfiles | 501 | 549 | 49 | 9.653 | ||
| Gene3D | 554 | 642 | 89 | 2.2E-12 | ||
| SUPERFAMILY | 557 | 640 | 84 | 4.32E-5 | – | |
| Pfam | 561 | 639 | 79 | 8.0E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi6g1v0095100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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