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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0100100 |
| Transcript ID | LotjaGi6g1v0100100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G26020.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q9LU89|2A5N_ARATH Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform; TrEMBL-Plants: tr|G7J2I4|G7J2I4_MEDTR Protein phosphatase 2A regulatory B subunit family protein; Found in the gene: LotjaGi6g1v0100100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:21741921..21747270) extracted from Lotus japonicus Gifu genome v1.2.
CGCAGAACATTCTTGGTCTTCTTCCTCTTTTGTTTCAAGCCCAAGATTGGGTTTCTGATGTTTGAAATTTGAACTCTGAA TCTAGTCTTCACAGTGTTTCTGATCGCTGTTTCTGATCCTTGCGGCTACATTTTTGATCCAGTTCCACCTTGTTCCACGA TCAAGGTCATCATCAGCATCATCATCATCATCATCAAATTGGGTATGCGAATTACTCAACTGTTGTTTTGTTTTCTACTA CTACCCATATAAGCAAAAAGGGGTTTATGTTTCTTCTTTATCGGTTATCAGAGTAGTTGGGTTGAAACAAACAAACAACA TTTGTGTCTGTTGCTGAAGCGAATTGCAGATTAGGAACAAGGGTGTTTTGTGTTTGTTTGATGAATTATGTTCAGAAAGG TACTAAATAAACTTCCTCGAAAGTCATCGAAAGGTTCCGAGAATCATCGCGAACACGGTGGAACTGGAAGAAGCCATGGC TCCAAGAACAGTGAAATTGTGGTGCCAGGAAGCAGCAGCAGCAAACCTGGAAATTCGTCTTCTGCGTTGAATGCTGGACA GAATCATGGTAACAAAGCTCCATTACCAAATTGTGTGGATGAGAATTTCAATTTCAATTCCTATGAAGCTTTGCCTGCAT TTAGGGATGTTCCTAGTTCTGAGAAACCGAGCTTGTTTGTTAAGAAGCTCAAGATGTGTAGTGTGGTGTTTGACTTCACT GACCCCGCCAAGCATCTAAAAGAAAAGGAGATTAAGCGACAGGCCTTGTCGGATTTGTTAGAGTATGTGTCTTCTGCTAA TGCTAAATTCACAGAGAATGTCATGCAAGATGTTGTGAAAATGGTGTCTGCCAATATATTCAGAACACTCAGTCCTCAGC CGCGTGAGAACAAGCTTGTTGATGGTGTTGATTTGGAGGAGGAGGAGCCTTCCATGGATCCTGCCTGGCCTCATTTGCAC CTCGTGTATGAGATTTTCCTCAGATTTGTTGCGTCTCCGGAGCTCGATGCAAAGTTGGCCAAGAGATTCATTGATCAGTC CTTTGTTCGGAGGCTGCTGGATTTGTTTGACTCTGAAGATCCTAGAGAAAGGGATTTCCTCAAAATGACTCTACACCGCA TCTACGGCAAATTCATGGCGCATCGCCCTTACATCAGGAAAGCAATCAATAATATATTTCTAAATTTTGTTTTTGAGACT GAGAAGCATAATGGGATTGCTGAATTCTTGGAAATTCTGGGGAGCATCATTAATGGTTTTGCACTGCCATTGAAAGAAGA GCATAAACTGTTTCTTGTTCGAATACTTATCCCACTGCACAAACCCAAGTGCTTAGCAATGTATCATCAGCAGTTATCTT ATTGCATTTCCCAATTTGTGGAGAAAGACTGCAAGCTTGCAGATACCATTATTAGGGGGTTATTGAAGTACTGGCCAATA ACAAATAGTATAAAGGAAGTCATGTTCCTGGGTGAGTTGGAAGAAGTCTTAGAAGCAACTCAACCACCAGAGTTTCAGCG TTGCATGGTGCCGTTATTTCGCCGTGTTGCCCGTTGTTTGAATAGCCCCCATTTCCAGGTATGGAATTTTCAATGCTTTC CTTTATCTTGTTTTCTGTTGTTTAGATTGATGTGGAAATTGAACCTGACTTCTTTTAGTGGAAACTTTCTTAAGATTGAT TACTGTATAATGTACTTAAATTAATTTCCTTTAGATGAAAAACGGTTTAGCTTCTGAGAAAATGAGGAATCCTTTTGTAT TACCCTATTCCTTTTGTTTTATAGTATTAGTTTAAATGATCAATATAAAGAAAATTGAATCCTTGTTTCCTTATGTCTAT TTAAGACATGGAAATCATTTAAATTTCTGCTTAATGAATTTGACTTTGGAAGTATCTGTTAAATAATCACCATATGAGGA TTGAGGAAGAGTGTGGTTGACTCGTACAAATGTGTTGGTGTTTCTCCATTCCAACATGCAAGAATATCCTTCTTGCTTAT CAAAAAAAAAAAAAAGATTCTCCTTCTTGGTTATTTTAGTGCAGAAGAATTCATATGAAGAATTATCACATACAGAAACT AATTTAGTCATCTTCCCTTAAATCTGTATTTTATTAAGAATATCACTACATTGTTGGACAGAGTAGGAAAGTGCTAAACC ATACAAGGATGATATATAATCATGCTTTACTCGAAACCCTTCATGCAAAAGGTGATTGAGAAATATTTGATTTTCACTAT TATAGGTATTGATCTTGGTTGACACATTTTTCAACATATTCTTTATGATTGGTCCATTTTTTTTAGCTTCCATGTACCTA TTCAGTTACTGATATCCCCTCTTGGTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCATGTTATCAACTTTGGT TTAATTAGTTTGTTAACTAAGTTAAAAGCATATGCTGTTAGGAGAATGGCGAAGTAAAATATTTTTGTTGTGTGCCGTCT AACACAAAAGTTTAGCATGGAAGCAGCATAGGTCCACCCACAACCCTGTGCTGAAATTGATTTTAATTCATAGAATGAGG GAATCAATTATTCTGCTCTTGACCTTTTGGTTGAAGAAACTCCGATATCATGTTGAGTAGTCAAACATTTCAAATGCTTA AGCTATCAAATGAGGACAGATAAAAGTTTTTTATTCATATGTTTAATGGGTTTAGTGTCACCTCTACCAAGTGACTAGCT GTTAGAGTGCATCGCTTAGTAATTCAGGAAGGTTTAGTCTGGTGTCTTAAATTGTAAGTTATATTTTTTAATTCTATATT CTTTACAATTAAATGCAAACATTTGACCATCCTATCCTTATGAAGAGGAAATCATTATTCATCTTGAGTAATTATGTCTT TATTCTCTTTATAATTTCTGCTGGCTTTCTTATCATTCTGGGCAATGGTTAAAGTTGCTTCGATGTGACTGAGAGGCCAC AGATTCGAGTTATGGAATTAGCTTCTTGCAAATGCAAAGTAAGACTTCCTACAATAGGTTTGTAATGGGTCCAACCCTTC CCTGAAACCTTGCCATGTTGCCCATTATGGGCATGCTACTAGTCAAGAATGAGAGTGGATGCTTTTGATAAGTTTCACCT CATAAAATCTATTTGTGACTCGAAATAATTTCCTGAACTACATCGTACAAACAGATCATCTATTACTTTGTAGCTGAATT TTGGAGTTTTGATGGTTTTATCAGAATAGGTGAAAGAAACCATAGTCCATAAACATTGTCTAGTATTATATTATTTGGTG CTGCCTACAATTTAGAAGACCTTGTGATGTGAATTGATGGTATGGTAACAATGTTGTTATGCTGAACTTCGATCTGATGA TTATAAGTTGACCCTTGTAGTTAATTCTTTGTCGTAGTCTACTATCAGAATTAAATTGAGATCCATGTAAGTAGTATGCC TCTGATTTGAATTTCCAAAATCAATTTTGGAACCCTAAAATTTATGCACTCATTATTAAATAGCGTGAAATATGTGGATT GTGAGCTATGAGCAGGACGAAATAATTCTAATTATATGAATTTTGTTATTTTAGATCTCATTATTAGGGATGTCAAAATT ACCTACACCCGTGGATACCCGCGGATAAAAACCCGCTATGGGTAAAATTACCCATGCCCACAGGTATCCACGGATTTATT TCATGGATATTTTCACTATCCATTTATTAATGGGGCGGGTACGGATATTGATGTATCCATACCCACGGATACCCACCCGA TATATAAAATACTAAAATATCTTTTATATGTATATACATAGATGTATATTAAATATCTAATGAATTTGTGTTTGAGTTAT AGTTCTCTTTCAAGTAAACTTATACAATGGTAATGGTAAAAAGAAGCCCTTAGACCCAAAAAAGAGTAGAAAAGAAGTAT TTTCCTTTACACATTGATTGACTGTAAAGTCCAATGTTAAATTTTATATTTAACATAATTTTCTTTTGAACAAATATATG TGAATTCATTTATGTTCATGGGTGTTGGGTGCCCATGGATATCCACGGATAGTTTAAAATCCGGTTAAAACCCACTAAAT GGATATCCATGTGGGTATGGAGCGGGTATGGATATAAATTTTTACATGTGGAGCGGGTGGTGGGCATATACTATCCATGC CCACCCGTACCCATTGACATCCCTACTCATTATGCTCAACACCATGATGATGGCAACTAGCCAATAATCATCCAAGTAGT TGGATTTTTGGACTTCTGTTTCATTCTTTAACTACCAAGTCTTCTGATATTTTCTTATAGAACTTAATTTCAGTTTTACT TTCATTACTGAGGCTTTTAGGCCTTTACCCTCCACCATCCCCCAAACCTCCTAAACAGAAAGAAGGAAGCAGATGTAAAA TATTTAGATGTTGGTAATTTCATTTTAGAAGTGTTTACATCAATGAGAATAACTCCAGTTTCCATCTATTCATAAATTTG TTAGTCGACTTTTTGTTGCTTTTATGACCTTGATGCAGACCTGTGCTGTGCAGGCTAAGCTTCTTGAAGTTCTCATGTAT TACTCACAAATGATTTTATGCTGGCATTGCATGATATGGTGTGAAAGTGCTTAATTTGGGCCAACAAAATTGAACAATTA TTTGACTAGCTTAATTTAACAAGTTTTGTCATAACTTGAAATGGTGTTGAATTGCAATATGTATGTTTTCCTGTGATGGT CATGTTTTTTGTTTATGTTTCCTCAGGTGGCGGAAAGAGCTTTGTTCTTATGGAATAATGATCATATTGTGAACTTAATC AAACAAAACCGCAAAGTGATATTGCCCATAATCTTCCCTGCATTGGAGAGAAATACTAGAAGTCATTGGAACCAAGCGGT CCATAGTTTGACTCTAAATGTACGGAAGATTTTCCAAGATATTGATCCTGATCTATCTAGGGAGTGCTTGCAAAAGTTCG AGGAAGATGAATCAAAGAAAGATGAAGTCATAGAAGGGCGTGAAAACACTTGGAAACGCTTGGAGGAGTTTGCTGTAAAG AAAGCTGCAAGTAGCGAAGCAGTGCTTATTGGTAAAAGCACCCACACGTAGCTATGCAGGTTCAAATTGTAGCATGTATT CTGCTCCAACAACTTTGATTTTTATAAATGAATTTCATAGTATTTTCTTTTGCATGTGATGGGTTTGCAAGAGGGGAAAT TTCTTGAACAATTTGAAAGGCTATGTGTAAGACCTGGATTTTCAGAACAAGCTAGGTTCCGATTCACGCGTAGAATCAGT GTAAGCGTGACAGGAGTTTGATATTTGAGGAAGATTAATGAAGAAGAAAGTTCAGGAATTGCTTGAGGAA
CDS sequence (LotjaGi6g1v0100100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCAGAAAGGTACTAAATAAACTTCCTCGAAAGTCATCGAAAGGTTCCGAGAATCATCGCGAACACGGTGGAACTGG AAGAAGCCATGGCTCCAAGAACAGTGAAATTGTGGTGCCAGGAAGCAGCAGCAGCAAACCTGGAAATTCGTCTTCTGCGT TGAATGCTGGACAGAATCATGGTAACAAAGCTCCATTACCAAATTGTGTGGATGAGAATTTCAATTTCAATTCCTATGAA GCTTTGCCTGCATTTAGGGATGTTCCTAGTTCTGAGAAACCGAGCTTGTTTGTTAAGAAGCTCAAGATGTGTAGTGTGGT GTTTGACTTCACTGACCCCGCCAAGCATCTAAAAGAAAAGGAGATTAAGCGACAGGCCTTGTCGGATTTGTTAGAGTATG TGTCTTCTGCTAATGCTAAATTCACAGAGAATGTCATGCAAGATGTTGTGAAAATGGTGTCTGCCAATATATTCAGAACA CTCAGTCCTCAGCCGCGTGAGAACAAGCTTGTTGATGGTGTTGATTTGGAGGAGGAGGAGCCTTCCATGGATCCTGCCTG GCCTCATTTGCACCTCGTGTATGAGATTTTCCTCAGATTTGTTGCGTCTCCGGAGCTCGATGCAAAGTTGGCCAAGAGAT TCATTGATCAGTCCTTTGTTCGGAGGCTGCTGGATTTGTTTGACTCTGAAGATCCTAGAGAAAGGGATTTCCTCAAAATG ACTCTACACCGCATCTACGGCAAATTCATGGCGCATCGCCCTTACATCAGGAAAGCAATCAATAATATATTTCTAAATTT TGTTTTTGAGACTGAGAAGCATAATGGGATTGCTGAATTCTTGGAAATTCTGGGGAGCATCATTAATGGTTTTGCACTGC CATTGAAAGAAGAGCATAAACTGTTTCTTGTTCGAATACTTATCCCACTGCACAAACCCAAGTGCTTAGCAATGTATCAT CAGCAGTTATCTTATTGCATTTCCCAATTTGTGGAGAAAGACTGCAAGCTTGCAGATACCATTATTAGGGGGTTATTGAA GTACTGGCCAATAACAAATAGTATAAAGGAAGTCATGTTCCTGGGTGAGTTGGAAGAAGTCTTAGAAGCAACTCAACCAC CAGAGTTTCAGCGTTGCATGGTGCCGTTATTTCGCCGTGTTGCCCGTTGTTTGAATAGCCCCCATTTCCAGGTGGCGGAA AGAGCTTTGTTCTTATGGAATAATGATCATATTGTGAACTTAATCAAACAAAACCGCAAAGTGATATTGCCCATAATCTT CCCTGCATTGGAGAGAAATACTAGAAGTCATTGGAACCAAGCGGTCCATAGTTTGACTCTAAATGTACGGAAGATTTTCC AAGATATTGATCCTGATCTATCTAGGGAGTGCTTGCAAAAGTTCGAGGAAGATGAATCAAAGAAAGATGAAGTCATAGAA GGGCGTGAAAACACTTGGAAACGCTTGGAGGAGTTTGCTGTAAAGAAAGCTGCAAGTAGCGAAGCAGTGCTTATTGGTAA AAGCACCCACACGTAG
Protein sequence (LotjaGi6g1v0100100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFRKVLNKLPRKSSKGSENHREHGGTGRSHGSKNSEIVVPGSSSSKPGNSSSALNAGQNHGNKAPLPNCVDENFNFNSYE ALPAFRDVPSSEKPSLFVKKLKMCSVVFDFTDPAKHLKEKEIKRQALSDLLEYVSSANAKFTENVMQDVVKMVSANIFRT LSPQPRENKLVDGVDLEEEEPSMDPAWPHLHLVYEIFLRFVASPELDAKLAKRFIDQSFVRRLLDLFDSEDPRERDFLKM TLHRIYGKFMAHRPYIRKAINNIFLNFVFETEKHNGIAEFLEILGSIINGFALPLKEEHKLFLVRILIPLHKPKCLAMYH QQLSYCISQFVEKDCKLADTIIRGLLKYWPITNSIKEVMFLGELEEVLEATQPPEFQRCMVPLFRRVARCLNSPHFQVAE RALFLWNNDHIVNLIKQNRKVILPIIFPALERNTRSHWNQAVHSLTLNVRKIFQDIDPDLSRECLQKFEEDESKKDEVIE GRENTWKRLEEFAVKKAASSEAVLIGKSTHT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 66 | 66 | - | – | |
| PANTHER | 1 | 509 | 509 | 0.0 | – | |
| PANTHER | 1 | 509 | 509 | 0.0 | ||
| PIRSF | 4 | 510 | 507 | 1.5E-236 | ||
| MobiDBLite | 11 | 29 | 19 | - | – | |
| MobiDBLite | 30 | 62 | 33 | - | – | |
| Pfam | 82 | 493 | 412 | 7.7E-190 | ||
| Gene3D | 89 | 492 | 404 | 1.1E-188 | ||
| SUPERFAMILY | 94 | 475 | 382 | 2.5E-156 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Protein phosphatase type 2A complex | A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | Protein phosphatase regulator activity | Modulates the activity of a protein phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a protein substrate molecule. |
Expression pattern of LotjaGi6g1v0100100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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