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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0107500 |
| Transcript ID | LotjaGi6g1v0107500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cinnamoyl-CoA reductase-like protein; TAIR: AT5G58490.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|I3SMX7|I3SMX7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0107500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:24428865..24433939) extracted from Lotus japonicus Gifu genome v1.2.
ATATCTCCTTTTTTTTCACTTCCTTGGTAGTTTGTGAATTAAAGTTTATTGAGCTCTTTACCATCCTTCGTCAATCTCTA TATATGCCAGGTCCTTGAGCACAAGTGCACAACCATTCACCACCATAGTTGAAATCCATATCTTCACTAGCCAAAAATAG TGTGATCACCGAACTCACCAAGCAAGGCCATGTCGAAGGTGGTTTGTGTCACTGGAGCCAGCGGCGCCATCGGATCATGG GTGGTTAAGCTCCTCCTCGACCGTGGCTACACCGTCCACGCCACCGTCCAAGATCTCAGTAACAATCAAACGCCTTACTT CTTTCTTACATAAACAAGAGAGTTTCATTCACAGCATTTTTCTCACACCCCATTTTCATGCATATGGTATAAAAGGAAGA TAATTCTCTTCTTTTTGTCCTAATTACATGGGATGTAAGTTCTCTGTTCTCACTCCCTTGTAACAACATGCAGTTGAAAT TCAAGGGTAGGATAATAATATATAAATTATAAGGGAAACATTGACTATAACATTAAAAATAACAATAAAAATCAGCATTA GCATAAATTTATCAATTAACTTTGTGGCGATAATGTTGTGACGTGTTGCGTTGCCCTTTGCAGAGGATGAAAAAGAGACC AAACATCTGGAGGCAATGGAAGGAGCTAAGGGCCGTCTCCGCCTCTTCGAGATGGACCTTCTTGACACCAACTCCATCGC CACCACCGTGAAGGGTTGTAATGGCGTCATACACCTTGCCTGTCCTAATGTCATTGGCCAAGTCACAGATCCAGAGGTTA AAAAAATTAAATTTTCATCACAAGAAAAAACTTGAGTGTAGTGGGAAATTGGTCTACGAAAATGTTGGTCATTGCTACGC AGTAATGTAGATAAAGTTAGTTTTCATGACGACATTCTTATCTTAAAAAAACTAATTTGACCGACATCGTAAACAATTAA AAATGATCAACGGACATGTTTTAAGTTCAAAGACGAGCTTGCTGATGTCAAACACTTATGAGTACCAATTTCATGGTCAC TAGAAAAACTAATTGATACGAGAAAAAATAAAGAAAATAAGAAATTGAGTGTGAAAAAATAAAGTAAAAGGATAGAAATT GAGACATGTGGGTGTGCACGTGCAGAAACAAATATTGGAACCGGCAATAAAAGGGACAGTAAATGTTCTGAAGGCGGAGA AGGAAGCAGGGGCGGAGCGGGTGGTGGCGACTTCGTCTATCTCCGCCATCACGCCGAGTCCGAATTGGCCAGCTGATAAG ATCAAGGGAGAGGACTGTTGGACGGATCTTGAATACTGCAAGGAAAAGGGGGTGAGTTTTTTTTTCCTTTTCTTTTTTTA ATGTGTTTTTAATTAATTGACAATATCCTGCTCCTGAGATATTCTTAGTTCTTACCCCTAGATAGATGAAAATTTATTTC TCTTTTTAACGGTTTTCTTTGTCTTTTTCTCTGTTCTTTTCAGTACATGCATAATTTCACTGTGATATTTCTGAGTCAAA TAATTTTTTTCCATCTAAAAGTTAAATTTTATTTGATCCTTTAAAAAAATAGATTAACTTAGTGGTGGCGGTTAGGGTGC AAGTGTATTATAGGTCTTGCACCATATAAGAGCACATTTGGCCTGTTATAATAGGTAAGATTACCTGCTGAGAAAAAAAA AATATAGCATCTAATTACAAAAATACCCTCCTCTAAACTCAGATCTCCTTCCTGTAAGCTATGTAGATTTTCCTCCAATT TTTTTTTTAAATAATCAATCATCACGGATCGTGGAGTGGAGATAGCTAGATACTCAACCCCCTCACTCCCACTGCCACCA CCACACGTAACTTCCACCACTGATGTGAATCACACACACCATTCACCAAACCAATTTAATAATGTTTGGTCTTAATCTCA AACCAAAATTCTCCACCACCACTGATTCCAATACTGGAATGGGTATACTACTAGTCTTGTTCCCTCAAGACAAATCCACC ACCACCAACAAATTGACCTCTCTTTCAGACTTTCACCATCAAAATCCCCTCCAAAACACAATCCGCCATTTCCATTTGTG TCATCCTCTTCACCACCCTCCTCCTCTTTACTATCTCCACCATTCCCACCACCACCACCCCACCTTCTTCCTCTTCCACT ACACGGCGACGCTACTCTCTTCTCTAGAAACTCACTTTCGCCCTTCAAAAAATGGGCATTCTGTACAGAAGAGGCACCAG AGCATGTCTGATCTCCTCATCTACCACGTCCCCGATGAAACCCCAATCGAGGATTTCCGCCTCTTCCTCCGCCTCCTCCA CCGCTCCTCCCTCACCGCCTCAACCGATGTCATTGGCCTCCGCTGGACCTGGAAAAGAAATCCTCCATGACCCTGGCTGA TGGCGAGTGGCGACGAGCTTTCTACGAGCGACACAGCGGTTCGACGGCGGCGACGGCGAGATTGATGGTGGCTTACCTCT GGTGCTCCAACACCTCTCTCTATATCTCTCTCTCTCTCTCGTTCTGTATCTTGATCTTGTTGCTATGCTCGCGGTGGCTG CGAATGGAAATCCCATATCTAAAGTTGCTGAGGGAGGAATGAAGGAAGTTGCAAAGGGCTTTTGTGTCATTAAATTATTA AATTTAAAATATAATCAAAAAATATTTTACCGGATAATCAAGTTTCCCTTTACCTCAGTGACACGTGTTGTGATGGTATT GGCCCTCAGAGGTATGGCACCGGTGCAATACCTAATGAGTATTGCTAGGTATTGCACCTTATCCTCCACCTAATTTATTT CTTAAAAAGTTAAGTGCTTTTTGTAGTAGTTTAAACCGTTATTAATGTATTTTGTGACGGTTAAAATTAGAACTAATACA TAAAAACTGTCATAAAATGAACAATAATAATTTTTTTTGAACGTTAAAATGAACAATAATGATCAATTTCACGTATTTTA CTATTGTTGGGACAAAAGCTATAAATATTTTTTAGCGGTTTAAATCAAATTCACCTCTATTTAATAGATTAAAATCATAT TTAACCCAATATTTTTTAATTGTCAATTAAAGAAACAATTAATAAAATGAAATAGACTAAAAAAAATTCATAATCAGGTT ACATTGTAAACTACTTGCGGCACTTATGTTTGTGACGGTTTAAGACCACCGCAATTTATATTTTATCAATTTTTTCATTT TGTGGCAGTCTAATAAAGTTGCTGCAAAGTAAGTGTCTTGATGTGTTTTATATATTAGTGCTGAAAGGGAAAAAATTTAA AAAACTTCATCAACCATTCATTACCGTGCCTGTCTTATTCAACAACTGAATTATTGTAGTTCCATTTCTTTAAAATAAAT GCCTGAATTTCCATTTCTTTGTAACACGTGGAGAAGTTATTAGTCACAGACTGAAATTGAAGTTATCTTTTTTTTTTTTT GGTCAATAAATTGAAGTTATCTAAATTGTCTTTTCTTGGAAGAACATTGTTTTCAACCGTCCAAGCTAATTTAAGTGGGC CATATATATTCTTTTGTTGTTAGTGGTTATACTTTTTGTTTTGGATAAACATGGTGGGTCTAGTTGATTTGAGCCATTAT TATTTTGTTGGGCCAGTTATACTATCCCATTGCGAAGACACTAGCTGAAAAAGCAGGCTGGGAATTTGCAAAGGAAACAG GCTTCGATGTGGTGATGATAAATCCTGGCACTGCCTTGGGCTCTCTTATTTCCCCAAGAATCAATTCCAGCATGGTTGTG CTTGCTGGCGTTCTCAAAGGTAAATGGGCTAAATTCATTAGCATCTCTAGCTTGTAGTTTTTTCTTGTTTGTTTTATATT CCCTTTGAAAATAATGACTAATTATCCCACTATCTGACGTGAGAGTTATGTTGGTGAACAAATTGTAAATACTTTTATAA GCGACCTATGATATCGGAAGCATACTCTAACCGGTGGTGGTTGCTAGAACCAAACCCACCCAAATTTTGTTGTCATTAAT CAAAAAATATCAAATGTTATGCGTAACCTTTAAAAAGGAAAACTTAGCACTACTAAGCTCGTGTTATGTGTGAGTTCCCG GAAGGGGCAGACCCACTTTATGGATATAATATAAATAATCCCACCTTTTATTTTGCATAAGGCTCGAACCGTTGACCTCA AAATCACATGTGAATAACATTATAGTGAGGGTCACCCTCGAACGTAATTCGAAAACAAATATACTTGTTAACTTTTTCTC AATGTATTTTTTATTCTCTGTCTATGATGCCTTTCTTTACATATTTTCTCATTTTTTGTTGGACATTGTTACAGGTGATA AAGAGACATATGAGGACTTCTTTATGGGAATGGCTCACTTTAAAGATATTGCCTTGGCCCATATTTTGGCATTTGAGAAC AAGAAGGCAGCTGGAAGGCACTTATGTGTGGAAGCTATTCGTCACTATAGTGATTTTGTGGCAATAGTTGCTGACTTATA CCCTGAATATAATGTGGTTAGGTGAGTATTCTACTAAACAATTGTACATAACACTTGAACAACTAGTACATTTTTTGATA ATAAAATTAATATGTAATTTGAAATATATAATAAAAACATATTTATTTTTCTTTTGCTTATAGGGTGACAAAGGATACCC AACCAGAGTTGTTGAGAGCAAATAATGCATCCAAGAAGCTGATTGATTTAGGTCTAAACTTCACACCTGCTGAACAAATT ATCAAGGATGCAGTGGAATGTTTGAAAAGCAAGGGTTATGTCTAACTTATCTGCTTTTAGATGTGGTGATGGTGTTAATT GCGCACCCTTCTATCCTAGTTTCACTCATTGTTCGTGCCATTGTCTTCTTTTGATTTTACTTTTAGTTGTGTGCTTATAA CTATCAAGTAAAATAAGGGTGCATTTGTATCAACATTTGAACACAGTTCTTATGTATGGGCAATTGTGTTGTGGTTATCA ATGGATGAGCGGCTTCATCTTTCACTACTCAAATTTCACCTTATAAGCATATTATTTAAAGGGAATTGTTATTCAGACCC CTCATCTATTCAGACCCAAGGAAATTCTAGAATCT
CDS sequence (LotjaGi6g1v0107500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGAAGGTGGTTTGTGTCACTGGAGCCAGCGGCGCCATCGGATCATGGGTGGTTAAGCTCCTCCTCGACCGTGGCTA CACCGTCCACGCCACCGTCCAAGATCTCAAGGATGAAAAAGAGACCAAACATCTGGAGGCAATGGAAGGAGCTAAGGGCC GTCTCCGCCTCTTCGAGATGGACCTTCTTGACACCAACTCCATCGCCACCACCGTGAAGGGTTGTAATGGCGTCATACAC CTTGCCTGTCCTAATGTCATTGGCCAAGTCACAGATCCAGAGAAACAAATATTGGAACCGGCAATAAAAGGGACAGTAAA TGTTCTGAAGGCGGAGAAGGAAGCAGGGGCGGAGCGGGTGGTGGCGACTTCGTCTATCTCCGCCATCACGCCGAGTCCGA ATTGGCCAGCTGATAAGATCAAGGGAGAGGACTGTTGGACGGATCTTGAATACTGCAAGGAAAAGGGGTTATACTATCCC ATTGCGAAGACACTAGCTGAAAAAGCAGGCTGGGAATTTGCAAAGGAAACAGGCTTCGATGTGGTGATGATAAATCCTGG CACTGCCTTGGGCTCTCTTATTTCCCCAAGAATCAATTCCAGCATGGTTGTGCTTGCTGGCGTTCTCAAAGGTGATAAAG AGACATATGAGGACTTCTTTATGGGAATGGCTCACTTTAAAGATATTGCCTTGGCCCATATTTTGGCATTTGAGAACAAG AAGGCAGCTGGAAGGCACTTATGTGTGGAAGCTATTCGTCACTATAGTGATTTTGTGGCAATAGTTGCTGACTTATACCC TGAATATAATGTGGTTAGGGTGACAAAGGATACCCAACCAGAGTTGTTGAGAGCAAATAATGCATCCAAGAAGCTGATTG ATTTAGGTCTAAACTTCACACCTGCTGAACAAATTATCAAGGATGCAGTGGAATGTTTGAAAAGCAAGGGTTATGTCTAA
Protein sequence (LotjaGi6g1v0107500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKVVCVTGASGAIGSWVVKLLLDRGYTVHATVQDLKDEKETKHLEAMEGAKGRLRLFEMDLLDTNSIATTVKGCNGVIH LACPNVIGQVTDPEKQILEPAIKGTVNVLKAEKEAGAERVVATSSISAITPSPNWPADKIKGEDCWTDLEYCKEKGLYYP IAKTLAEKAGWEFAKETGFDVVMINPGTALGSLISPRINSSMVVLAGVLKGDKETYEDFFMGMAHFKDIALAHILAFENK KAAGRHLCVEAIRHYSDFVAIVADLYPEYNVVRVTKDTQPELLRANNASKKLIDLGLNFTPAEQIIKDAVECLKSKGYV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 319 | 319 | 1.2E-100 | – | |
| SUPERFAMILY | 1 | 313 | 313 | 8.35E-56 | ||
| PANTHER | 3 | 316 | 314 | 2.7E-182 | – | |
| PANTHER | 3 | 316 | 314 | 2.7E-182 | – | |
| CDD | 5 | 297 | 293 | 3.05777E-143 | – | |
| Pfam | 5 | 239 | 235 | 2.3E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Coenzyme binding | Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed. |
Expression pattern of LotjaGi6g1v0107500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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