Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi6g1v0111100 |
Transcript ID | LotjaGi6g1v0111100.2 |
Related isoforms 5 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Phosphate transporter; TAIR: AT2G29650.1 phosphate transporter 4;1; Swiss-Prot: sp|O82390|ANTR1_ARATH Sodium-dependent phosphate transport protein 1, chloroplastic; TrEMBL-Plants: tr|A0A1J7H9J3|A0A1J7H9J3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0111100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:26000098..26006834) extracted from Lotus japonicus Gifu genome v1.2.
AAACTTCAATCTGTTTCACATGTGCAGGTAAATATGAGCATTGCTATACTTCCTATGTCAGCAGAGTACAACTGGAGCCC CAGCACTGTCGGTTTAATACAGTCTTCATTCTTTTGGGGATACCTCCTCACTCAGGTAAATGTGATTTCATTTTGATAAA TTTAAGTCTGACTTGTAACTCTTTAATTGTTTGTATGGATTTGAACTTGGAGCCATGACTCTTAAGCATAGGTGGACATT TGTTGCAGATTGCTGGTGGAGTATGGGCAGACAAAGTAGGGGGAAAGCAGGTATTAGGATTTGGAGTGGTTTGGTGGTCT GTTGCGACTATTCTCACTCCTGTAGCTGCCAAACTTGGGTTGCCTTTCCTACTAGTTGCTCGTGCGCTAATGGGGATTGG TGAGGTGGGTTCTGTTAAAATGATCTAAACTGTATGCATTCCTGCATTAAACTAGTAGGAAAAAGCTTACAATTTCTGTT TAGTTGGAAAAGAAAAATCTAATGATAAATAAATAAATTAAATGTTCTTTTGCTATAATCCATATTGTCACTGATTTTAG TAATGATTAGATTAATCTAGTTAGTGACAATACAATGTCATGATAGCTTTTTTACATGTTGAGCTGACTTCCTTTGACCC CCTTCTAGGGTGTTGCTATGCCAGCCATGAATAATATTCTATCTAAATGGGTTCCTGTGGCAGAGAGAAGTAGATCACTA GCGCTTGTCTACAGTGGCATGTACCTAGGATCAGTTACTGGACTGGCCTTTTCACCCTTCCTAATTCATCAGTTTGGATG GCCATCAGTATTTTACTCCTTTGGTTCTCTAGGGACGGTTTGGTTTTCTGTGTGGCTTAGTAAGGTAAGATTTGTATTGT TTAATGATTTCCTTTTCTAGCATGTTGGGTTCAGCTTATCTTTCCTCAGAATCAATTCTGGCACTCAGAAGCTACTCATA GTTTCTTCTCCCCATAATTGATTTTGTCTTTAGAATCAATTGTTGAAGGATTTCCAAATGCGCACGAACATAGATGGTTT CTCTATGAACTTTGAAAATACTTGCGCACATGTTCTCTCTTGATAGAAACACTTTTTTGACTTGAAGGTTGATTCTTTAT TATGATTTTTGCGACCACAACTTCCCCCCTTGAAGCTCTCACTATCTTAGAATATTTACTATTTTCTCATGTGCTAATCT TTTCTGTTTTTTCTGGAATTCATAGGCACATAGTTCACCTCTTGAAGATCCTGAATTGCGGCCTGAAGAAAAGAAGTTGA TTCCTACCAATAGTTTTTCCAAGGAACCATTGAAAGAAATACCTTGGGGATTAATCTTGTCAAAAGCACCTGTCTGGGCC CTGATAGTGTCCCATTTTTGCCATAACTGGGGAACTTTCATTCTTCTAACATGGATGCCAACATACTATAATCAAGTAAG TACTCCCTCCGTTCCAAAACTATTGTAGTTTTAGCTTTTTTATTTTGTTCCAAAATCATTGTTGTTTTACATATCCAAAG CACTTTATCTCATTCTCTTCCATTCATGCCCTCATTTAATAGTGTATCTCCCAAGTACCACCTTTTATTTCTACCAATCA CAACTCTCACCAATTAGTTGACCAATGATTTTCATTCTCTTTCTTTCTTATAACTCATATTAAATTAGGGTATTTTAGTC AAATTATAACACCAATTAATGAACTCTTAAACTTTGTGAAAAAACTAAAACTACAATAGTTTTGGAACGGAGGGAGTATT TCTTTTTGTTTTTTGGGCATTTTACCCAAGTACATGATGTGGTACAGAAGGAGCTAGATCATGCCCGTATTTTCTTTTTT AGTCCTTACAACTGCTGTGCATAAATTTCTTTGGATGATAAAGTTTCCTGTACCTATATGCAAGGAGAAGTACTCAAGGA ACCACAACTTAAATTGTTTTCATCATCTGGTTCTAGGTATAAGATATGGACAGGGAAGAGGGAACATTGATGCTGTAATT TACAGAAGTAGGAAACCAAGCAAATGATCTAAATAATATTGGGACAAAGGAAGAAAAAGAGAATAAGAGATGGTGTGCAC ATTTGCTTTTCATCAGTTGGCTATAGACCATGGTTTCAGAAGCCATTTATGATGCTATTGCTATGTTCTTTTTATTTGCA TGTTGAAGCTTTTGATTTTTACTGCCTGAGGCTTTTTCTCTTTAAAGCTATAATAGAGAGTTCAGATTATTACCTCTTCA TCCTTTCTCCCAGAACCTTCAACTCCCTGCTCATTCTACTATCTTCTTATCCATTCATCTCATTCTTTTGTTGAAACTAT CTCACCTGATAACAACATGGTTTATTGGTATAAACAAGCAGCTCATTCACTCTACTTAGTTGTCAACCTTTGATGTCATA TAATTCAATGTGTGAGCATGCTTTCTGATATTTAATATTTTACGCATCCTACTGGAAATATTTGTCAAAGGCTCAACTCT TAGTATTATTGATCCTGAGGCTTATAGATTTCATCTTTTGATTGGAAGTTTTAACTAACATCTTGACATACCAATTACAA AATATTTTGATTTGTAATCTTCTTTGATACTCGGAAAACAAATGATTGTTTAAAGCTAACCAAGTTATTTTCAAATATAA TCCTAGGTTTTGAAGTTCAACCTTACAGAATCGGGGCTGTTTTGTGTTTTACCGTGGTTTACAATGGCACTTTCTGCAAA TCTTGGAGGTTGGATTGCAGACACTCTTGTCAGCAAAGGTGTATCAGTTACAACGGTCCGCAAGGTATCTCTCTGCCATA GTTTTGTTATAGTTTTACTTATTGCTTCTACTCGGAAAAATAGCTATCTAAATTAATTCTTGACAAAGTTCCTTGTGTAT GAAGGGCTAGGGATCTATTGCCTATCCTTTTACTCATGTAATAATAAAAAACATTAACAAGATCAATATCTAATTTGCTT CTTTTTTCCTATCACAAAATTGTCATGTAGATTGTTATATTTAATTTATTTTCTATATAAATAAGTTCTATCAGGATAAT TTCATGTTTCTTAATTTGTGAAAATAATTTATACATGTAGGTTTAATTTATGGATTTTTATTTAATTTATTTTCTATATA AATATGTTCGATTAGGATTATTTCATGTTTCTTAATTTGTGAAAATAGTTTACAGTTGTTGCCTTAATTTATGGATATGT CTGGGAAGCTGTAGGCCCACATTTGAGGTTTTAAATTTGTCAATACAACTTTCATGTTTGGTTCAACATCTTTCCTCGGA ATCAATTCTGAAACCCAGCAGATACTCAGATAAACTTCTCCTCATAATTGATTCTAGCTTTAGAATCAATTGTAGAAGGA TTTCCAAACATGCACTTACTCATTAGGTGACTTATTATCAGGCCCCATAAAATCTTCTAGTTATCTCATTTTATGTTAGA AATATATCTATTCAATGTATGTATCCTAATGTTAATAATGGAAATGACAACATTTCTTTTGAACTACTTCATATTGTTGA AGATAGTATCAAAACTTTTTTTTACAAAATTTGGAGACAAATCCTCTTTGCCTTCTCTGACCTTAAGTATCTAGCAGCCT GCCATTGACTACTTGCTTGCTGAACTCAATGCCATTGCTAATAGCCTATTGCTTCGCGTTATAGTTCTACATTTTCTTTG CAGATTATGCAAACAGTTGGGTTTCTTGGCCCTGCTTTCTTCTTAACTCAATTGAGCCACATTCATTCTCCTGTAATGGC TGTTTTGTGTATGACTTGCAGTCAGGTTTGCTTCTTTTTTCTACTTAATATTCTTATTCTGATAAGGTAGTGTGTGTAAT CCTAACCTAAAATCTGTTTATTATTTATGTGTGTCTCTTGAATTATTTCTGGAGAAAGAGCTACTGCTAATAAAGTTTCT TAAATTGAACTATCAAATAATTCATGGTTTGCCTCCATTGTTTTATTCTCATAGAACCCGCTGGTCCATTTATAACTCCT TTAGAAATATTGCCCGAATGGTATTTCATTCCTGTATTTCAAATACATCGTAAAGTGGCAAAAAAGTTATCTGAGAATTC GACTGGTGAAACTAAATTTTCTTGACAATAGTTTCTTTAAACTTCTTGTAAGACAACATAACTAACCTTTTATTTTTGCT AAATCTTTGTGTAAAAATTAGACAGTGGTCGTTCATCCATTTATTCCATGGAGATTTGTCTTTCCTAACTTGTTTCAAAT TCTTTCTGAACAGGGAACTGATGCATTCTCACAGTCTGGATTGTATTCAAACCATCAAGATATAGCCCCTCGATATTCTG TGAGTGGAATCATTGTACCTATAATTTTCGGCAACATGGACTCTATATTTGATTTGTGGAATAAGAATGCGACAAATATT TTTATTATATGTATGCTAATTCTTGACCTCTTAGTCATCTTCTCATAATTGGTTTTCTTGTTATGTCATTTGGGAAGGAA AGGTTCCTATATTTATTTCCTATTTTTCTCCTTAGGGGATATTGCTTGGTCTATCTAATACTGCTGGAGTGCTGGCTGGT GTCCTTGGAACTGCAGCAACAGGTTACATTCTGCAGCATGGTAAGTGTTCCTCATATTTGCTTGTTTCCAAAATGTCAAT TGTCACCATTCCTAGCTTAAGCTTTTACATGAAGGATCGGAGATTGAGTATAGTTTATGTTGTGCACAATCTGAGTCTCA GTAGTACTCTGACTTTTAGCAATATGGTAATGTGCTGACACTGCACCCTAGACTACAACAACAACAATAACAAAAGCCTT ATCCCACTAAGTGAGTCGGCTATTTGGATCAGACGATGCATTGCGCTTGATCAAAATTCAAATTTTGTGGGATATGATTG ACATTGAGGTTTCTTTTAATAATATCTTCCAAACGTTATTTTTCGCCTCCCTCTACCTCATTACAGAATTAAGATCCATG TTATCAACTATTTTCATTGGTGCCTCAAATGTCTTATTTGCACATGTCCAAACTACCTTAACCAAATTTTGTACTATATT CGAGATTACGGTCCAAAGTTATTTTGTTTATTTAGGATGCATTTGGATAAACAACTTAATTAAGCACTTATGGAATCATA AGCTAATTAGAGAAGATTATTGAAATTAGTGCAAAATAGCTTATAGCTAGGTATAAGTGCTTGTGCATAAGTTCATCCGA ACCAGTGTTCTAGGTTGCGGTCGCGGTTGCGGACGCGGTTGCGGTCGTTGCGGATGCGGGCAATGCGGCTACCGCAATGC GGGTTGCGGCTATTGCAGCGTGATTTTTAAAATAAATTCACAAAAATTAGAAAAAAGTATATCAAATTATTTTAAATCTT TTATTTATAATATCACCTCAAAAAACACTTCAAAAATAGAAAGATAATATAATGATCCTTATATTAATTTTAAGTAAAAC AATCAAACATATACTAGTTTTTTAAAATGAAAGCATTGTTAAAATACTCTTAAAAATCTGTCTAATCATTTTAATTAATT TTTTTAACCTTATTCCCTTATTCTGGACTTTTCTACTGCTTCCACTCTCATCTATCTACCTTCCACTGTTCCACAGAGAA AAGAAAACCACACCTACCATACCAAGTCTTCTTCCCCAATTTTCTTTTCACTTTCCTCCCACCTACCTCAGACCCACTCA CGCCCCTCCCTCAAATGTCACGACTTACCACACCAAGTCTTCTTCTCTAATTTTCTTTTCACTTTCCCCAACTGCATCAA ACACATACCAGTGCTACTCAACCACGATCTCTAAAATGGCCTTATCAACAGAGCAATTCATCATAACGGCGTATTTGAAC CTCACATCGGAAGAAAGTCGAGAGTTTGTGGCCTAGAAAGGTCAGATGCGGCTTGAAAGAGTGCGTTGCGGGTGGGTTGC GGCCTTGTTGCGGTGAGTTGCGGGTGAGTTGCGGTTATGTTGCGGCCGCTACAGGGGAATTTAAATCACCCCGCAATTGC GGTGTGATGCCGTTTCGGACACCGCCGCAACCGCAATATTGCGGCCGCAATTTGTGATGCGGTCCGCAATTTGAAACACT GATCCGAACCACTTCTGAAAGTAAGCTTAAATAACTTATAGGTAGGTCATAAGCCATTTTCATAAACTTATGCAAATGCT TGCATATATACGATAAGCTCAAATTAGTTCTTTCAAGCACGGTCTTATTTGTTTTTATCTTGGAGTAACTTCGTGGTTCT TTATCTCTTCACTTTGATGGTGGTGGGAGTGGAATGTATAGCTTCACAATGTTTACTTCGGTTCTGTTCTCCCGTGAAAA CATTTATTTCATCGTTCTGCATATTAAATGGAGATTGACAATTAAATTTCTAAACTCCGTTAGTTGAGTTTGGAAATTTG ACTCCCTCCTGGTAAAGTTATGGAGCTCTCTATAGTCAGTAACACAATTCCTTGTGGTTAAGAATGATACTGTATTACTC ATTACAACAAATGGAGATTGTCAACCATGCAATTCATGTTCTAAACTATTTTAGTTGATTTTGAAAATTTTCCTCCCTCC TGGTACTCAAATATACTTAAATAAAATCTGATATTTGGGACAAGAATATGACACTGTTGTTCTCTTTGAACATTTTCAGG CTCCTGGGATGATGTTTTCAAGGTTTCAGTAGGGCTATATTTGGTTGGAACTGTGGTGTGGAACCTTTTTTCAACTGGTG AAAGGATCTTGGAATAA
CDS sequence (LotjaGi6g1v0111100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCATTGCTATACTTCCTATGTCAGCAGAGTACAACTGGAGCCCCAGCACTGTCGGTTTAATACAGTCTTCATTCTT TTGGGGATACCTCCTCACTCAGATTGCTGGTGGAGTATGGGCAGACAAAGTAGGGGGAAAGCAGGTATTAGGATTTGGAG TGGTTTGGTGGTCTGTTGCGACTATTCTCACTCCTGTAGCTGCCAAACTTGGGTTGCCTTTCCTACTAGTTGCTCGTGCG CTAATGGGGATTGGTGAGGGTGTTGCTATGCCAGCCATGAATAATATTCTATCTAAATGGGTTCCTGTGGCAGAGAGAAG TAGATCACTAGCGCTTGTCTACAGTGGCATGTACCTAGGATCAGTTACTGGACTGGCCTTTTCACCCTTCCTAATTCATC AGTTTGGATGGCCATCAGTATTTTACTCCTTTGGTTCTCTAGGGACGGTTTGGTTTTCTGTGTGGCTTAGTAAGGCACAT AGTTCACCTCTTGAAGATCCTGAATTGCGGCCTGAAGAAAAGAAGTTGATTCCTACCAATAGTTTTTCCAAGGAACCATT GAAAGAAATACCTTGGGGATTAATCTTGTCAAAAGCACCTGTCTGGGCCCTGATAGTGTCCCATTTTTGCCATAACTGGG GAACTTTCATTCTTCTAACATGGATGCCAACATACTATAATCAAGTTTTGAAGTTCAACCTTACAGAATCGGGGCTGTTT TGTGTTTTACCGTGGTTTACAATGGCACTTTCTGCAAATCTTGGAGGTTGGATTGCAGACACTCTTGTCAGCAAAGGTGT ATCAGTTACAACGGTCCGCAAGATTATGCAAACAGTTGGGTTTCTTGGCCCTGCTTTCTTCTTAACTCAATTGAGCCACA TTCATTCTCCTGTAATGGCTGTTTTGTGTATGACTTGCAGTCAGGGAACTGATGCATTCTCACAGTCTGGATTGTATTCA AACCATCAAGATATAGCCCCTCGATATTCTGGGATATTGCTTGGTCTATCTAATACTGCTGGAGTGCTGGCTGGTGTCCT TGGAACTGCAGCAACAGGTTACATTCTGCAGCATGGCTCCTGGGATGATGTTTTCAAGGTTTCAGTAGGGCTATATTTGG TTGGAACTGTGGTGTGGAACCTTTTTTCAACTGGTGAAAGGATCTTGGAATAA
Protein sequence (LotjaGi6g1v0111100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSIAILPMSAEYNWSPSTVGLIQSSFFWGYLLTQIAGGVWADKVGGKQVLGFGVVWWSVATILTPVAAKLGLPFLLVARA LMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHQFGWPSVFYSFGSLGTVWFSVWLSKAH SSPLEDPELRPEEKKLIPTNSFSKEPLKEIPWGLILSKAPVWALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLF CVLPWFTMALSANLGGWIADTLVSKGVSVTTVRKIMQTVGFLGPAFFLTQLSHIHSPVMAVLCMTCSQGTDAFSQSGLYS NHQDIAPRYSGILLGLSNTAGVLAGVLGTAATGYILQHGSWDDVFKVSVGLYLVGTVVWNLFSTGERILE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
SUPERFAMILY | 1 | 382 | 382 | 5.89E-72 | ||
CDD | 1 | 383 | 383 | 2.04436E-162 | – | |
PANTHER | 1 | 390 | 390 | 8.8E-259 | – | |
PANTHER | 1 | 390 | 390 | 8.8E-259 | – | |
ProSiteProfiles | 1 | 387 | 387 | 24.947 | ||
Gene3D | 1 | 166 | 166 | 2.5E-35 | – | |
Phobius | 1 | 19 | 19 | - | – | |
Pfam | 4 | 348 | 345 | 2.6E-61 | ||
Phobius | 20 | 41 | 22 | - | – | |
TMHMM | 20 | 42 | 23 | - | – | |
Phobius | 42 | 47 | 6 | - | – | |
Phobius | 48 | 68 | 21 | - | – | |
TMHMM | 49 | 71 | 23 | - | – | |
Phobius | 69 | 73 | 5 | - | – | |
Phobius | 74 | 97 | 24 | - | – | |
TMHMM | 75 | 97 | 23 | - | – | |
Phobius | 98 | 108 | 11 | - | – | |
Phobius | 109 | 131 | 23 | - | – | |
TMHMM | 110 | 132 | 23 | - | – | |
Phobius | 132 | 136 | 5 | - | – | |
Phobius | 137 | 156 | 20 | - | – | |
Phobius | 157 | 200 | 44 | - | – | |
Gene3D | 187 | 387 | 201 | 8.0E-34 | – | |
TMHMM | 199 | 221 | 23 | - | – | |
Phobius | 201 | 222 | 22 | - | – | |
Phobius | 223 | 241 | 19 | - | – | |
Phobius | 242 | 263 | 22 | - | – | |
Phobius | 264 | 274 | 11 | - | – | |
Phobius | 275 | 294 | 20 | - | – | |
Phobius | 295 | 331 | 37 | - | – | |
TMHMM | 332 | 354 | 23 | - | – | |
Phobius | 332 | 356 | 25 | - | – | |
Phobius | 357 | 362 | 6 | - | – | |
Phobius | 363 | 382 | 20 | - | – | |
TMHMM | 364 | 383 | 20 | - | – | |
Phobius | 383 | 390 | 8 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0111100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…