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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0131400 |
| Transcript ID | LotjaGi6g1v0131400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptide transporter, putative; TAIR: AT3G54140.1 peptide transporter 1; Swiss-Prot: sp|Q9M390|PTR1_ARATH Protein NRT1/ PTR FAMILY 8.1; TrEMBL-Plants: tr|A0A1J7FVJ9|A0A1J7FVJ9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0131400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:37852560..37855916) extracted from Lotus japonicus Gifu genome v1.2.
TGTGTATCTGCCCACATATAGAGGGAATATCCCAAAAACATAGTTGCATCCCTTTTCTCACTACATGTGAGACAAGTCAA CAGTCTCAAACAAGGATTATATTTTAATATTTCTAAGATACAACTTATGTAAGGGCGGACTATAAAATACGTCTTTAATC AAGTACCTATCTTCTATCCATCAAGTGCATACTCATCAATCATTACATCTAGCTGGATTATGCTTGCATAAGTTGGCAAC TTTAAGGTAAGAGATTGTCATACTCTTGCTTGGGTGTTCTCATTTATTGTGTTTATCTTCTGAGATTCTGAATCTTGTAA GTCTCAATTTCTACTCTCTAGACTCATGTATTGGAATCCTTTTCATCTATGAGGATTTCTAAACCAATTGCCTTTTTAAA AAGGAATAGAGAAGAGAATTCAATATAACTAAACATCAGAATCAGAAACTGATTTCTAAAGCCTTGTTCTTCTGCCCAAG ACACCAGTTTCACCAGTTTTGTGGCTTAGTTATACAAGAGTTTGCTCAAAAGATGTGATTTCTTTTTCTTCAACTGAGTC CTAATTTGACCTTTGTCTCTTGTTTATATCTTTCAGAAGAGCAATTGATATTTATCTTTTTTTGGTGTTTTAATCTGTCA GCTTGTGTTGCTTGTTTGGTTGCAGTTGCAAGTGAAAAATTGGCCAGTGTGATCAAGTTTTGAATTACAATGACGGAGGA TGATAATTATACAAAAGATGGAACTGTAGATTATCTTGGAAATCCAGCCAATAAAAAACAAACCGGAACCTGGAAGGCCT GTCCTTTTATTTTAGGTAAGTAAGGTGTTTGTTTTAAGTCCTAACTGAGTGGGATGGATATATTGGAAATTGGAATTATG AAATGTTAATAATTCCTTCAAGCTTCAATTTACAGGGAATGAATGTTGTGAGAGATTGGCTTATTATGGGATGAGCACAA ATCTGGTGCTTTATTTTAAGAAGCAGCTAAATCAGCACAGCGCGACTGCTTCTAAGAATGTTTCTAATTGGAGTGGAACA TGCTACATCACACCACTAATTGGAGCATTTTTGGCTGATTCCTATCTGGGAAGATATTGGACAATTGCATGTTTTTCAAT AATCTATGTTATTGTGAGTAAGCTCTCTTCAATCTGTACTTGATCAATAGCTGTTGTTTTAAAAAAAAAAGGATATAATT TTGGAGCTCCAATAATGGGCACTGAAACTGTGTGAGATCTGAAAATTTGCAGAATTTATGCTGTATCAAATTCTATATGC TAGCATGTTAAACAGCATCTAAAGGCTATTCTTGTTCATCAACAGGGAATGACACTCTTGACATTGTCTGCATCAGTTCC TGGCATAAAACCAACATGTCATGGAGAAGAAAACTGCCATGCTACTGATGGACAGAGTGCTGTGTGCTTCGTAGCTCTTT ACCTGATAGCGCTCGGCACTGGTGGGATCAAGCCTTGTGTTTCATCCTATGGAGCAGATCAGTTTGATGATGCTGATGTG GTTGAGAAGGAACACAAGAGTTCTTTCTTCAACTGGTTCTATTTCTCAATCAACATTGGTGCTCTCATTGCTTCTTCTTT ACTGGTCTGGATTCAAGATAATGTGGGTTGGGGATGGGGCTTTGGGATCCCAGCAGTGGCTATGGCTGTTGCAGTGGTGA GTTTCTTTTCGGGAACAAGGTTGTATCGGAATCAGAAGCCTGGAGGCAGCCCCCTCACGCGTATGTGCCAGGTGGTAGTG GCATCCATGAGAAAGTGCGGAGTTCAAGCACCTGATGACAAGTCTCTTTTATATGAGATTGCTGACACAGAGTCTGCTAT CAAAGGAAGCCGCAAGCTTGACCACACAAATGAGCTAAGGTAAACAAATGGCTACAAATTTCTCCATGGCCAATTTCTGT GTTTTGGTTACTCAGACTCACTCAGAAGCAAATTTATGTCACACTTGAATTGAAAATATAGAGATGCAGATTTTAGTGCA TGTTTTGAAATCCTTCTATAATTGATTCTAAATGCAAAATCAATTCTGGGGAGAAACGTACGTGAGTGACTTCTGAATAT CAGATTTGATTCTGAAGTAAAAGAAGTTGATCCAAACATAATATTAGTTCATCACATGCTATCATATTAAGATATGACAA TCTTAATGATCTTTAGAATTTAAATTGTTGTGAGAGTATTATCATATCAAATCATCTTTAGCTTATTTTGAAGTCAGAAA AAGGAGAATAGCCTATTGCCTAATCTATTTTCTCACTTTTTTGTTGTGTTTATCAGTTTTTTTGACAAAGCAGCAGTGGT AGTACAATCAAGTGATCAGAAGGACTCAGTAGACCCATGGAGACTTTGCACTGTAACACAAGTGGAAGAACTAAAATCCA TTTTAAGAATGCTTCCTGTATGGGCCACAGGCATCATATTTGCCACTGTCTATGGTCAGATGAGCACCTTATTTGTGTTG CAGGGACAAACCATGAACACTCATGTTGGCAACTCCAACTTCAAAATCCCACCAGCAGCACTTTCTATCTTTGACACACT CAGCGTCATATTTTGGGTCCCAGTGTACGACTGGATCATCGTGCCGATTGCAAGAAAGTTCAGCGGCCACAAAAACGGCC TAACTCAGCTCCAGAGAATGGGAATTGGCCTCTTCATATCCATATTCGCCATGGTGGCTGCAGCAATCTTGGAGGTCATT AGACTTAGAATGGTGAGGAGGCACAATTACTATGAACTTAAGGAGGTACCCATGTCAATATTTTGGCAGGTTCCTCAGTA TTTCCTTATAGGTTGTGCAGAAGTGTTCACATTCATTGGTCAGTTGGAGTTCTTCTATGAGCAAGCCCCTGATGCCATGA GAAGCCTGAGTTCTGCTCTCTCACTACTAACTGTTTCACTTGGACAGTACTTGAGCTCTCTGCTTGTGACTATTGTGACA AAGATCAGTACTAAGAATGGTGGTTCTGGATGGATACCTGATAATCTAAATTATGGTCATGTTGATTATTTCTTCTGGCT ATTGGCAGTGCTAAGTGTGCTGAATTTGATTGTATACCTTCCGGTGGCTAAGTTGTACACATATAAAAGAACAGTGGGAA CTCTCCGCTGAAATGCGGAAGTTTCAATACACAAGACATAGGAAGTTTCCTTCACAAGGCTTGTTTTCACGCATACTGTT TGATATGGTCAATCATATCAGCATATTGTAATCTCTGTGTCAGATCCTTGAACCTTTTCAAATTGTTGCAAAGTTTATAT TGTGACTGCTTACAAAATTGCGTTCGGTAAACATTCTCATTACAACAACACAGTGCGTTCTGTTAACCAATTCTTGC
CDS sequence (LotjaGi6g1v0131400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGGAGGATGATAATTATACAAAAGATGGAACTGTAGATTATCTTGGAAATCCAGCCAATAAAAAACAAACCGGAAC CTGGAAGGCCTGTCCTTTTATTTTAGGGAATGAATGTTGTGAGAGATTGGCTTATTATGGGATGAGCACAAATCTGGTGC TTTATTTTAAGAAGCAGCTAAATCAGCACAGCGCGACTGCTTCTAAGAATGTTTCTAATTGGAGTGGAACATGCTACATC ACACCACTAATTGGAGCATTTTTGGCTGATTCCTATCTGGGAAGATATTGGACAATTGCATGTTTTTCAATAATCTATGT TATTGGAATGACACTCTTGACATTGTCTGCATCAGTTCCTGGCATAAAACCAACATGTCATGGAGAAGAAAACTGCCATG CTACTGATGGACAGAGTGCTGTGTGCTTCGTAGCTCTTTACCTGATAGCGCTCGGCACTGGTGGGATCAAGCCTTGTGTT TCATCCTATGGAGCAGATCAGTTTGATGATGCTGATGTGGTTGAGAAGGAACACAAGAGTTCTTTCTTCAACTGGTTCTA TTTCTCAATCAACATTGGTGCTCTCATTGCTTCTTCTTTACTGGTCTGGATTCAAGATAATGTGGGTTGGGGATGGGGCT TTGGGATCCCAGCAGTGGCTATGGCTGTTGCAGTGGTGAGTTTCTTTTCGGGAACAAGGTTGTATCGGAATCAGAAGCCT GGAGGCAGCCCCCTCACGCGTATGTGCCAGGTGGTAGTGGCATCCATGAGAAAGTGCGGAGTTCAAGCACCTGATGACAA GTCTCTTTTATATGAGATTGCTGACACAGAGTCTGCTATCAAAGGAAGCCGCAAGCTTGACCACACAAATGAGCTAAGTT TTTTTGACAAAGCAGCAGTGGTAGTACAATCAAGTGATCAGAAGGACTCAGTAGACCCATGGAGACTTTGCACTGTAACA CAAGTGGAAGAACTAAAATCCATTTTAAGAATGCTTCCTGTATGGGCCACAGGCATCATATTTGCCACTGTCTATGGTCA GATGAGCACCTTATTTGTGTTGCAGGGACAAACCATGAACACTCATGTTGGCAACTCCAACTTCAAAATCCCACCAGCAG CACTTTCTATCTTTGACACACTCAGCGTCATATTTTGGGTCCCAGTGTACGACTGGATCATCGTGCCGATTGCAAGAAAG TTCAGCGGCCACAAAAACGGCCTAACTCAGCTCCAGAGAATGGGAATTGGCCTCTTCATATCCATATTCGCCATGGTGGC TGCAGCAATCTTGGAGGTCATTAGACTTAGAATGGTGAGGAGGCACAATTACTATGAACTTAAGGAGGTACCCATGTCAA TATTTTGGCAGGTTCCTCAGTATTTCCTTATAGGTTGTGCAGAAGTGTTCACATTCATTGGTCAGTTGGAGTTCTTCTAT GAGCAAGCCCCTGATGCCATGAGAAGCCTGAGTTCTGCTCTCTCACTACTAACTGTTTCACTTGGACAGTACTTGAGCTC TCTGCTTGTGACTATTGTGACAAAGATCAGTACTAAGAATGGTGGTTCTGGATGGATACCTGATAATCTAAATTATGGTC ATGTTGATTATTTCTTCTGGCTATTGGCAGTGCTAAGTGTGCTGAATTTGATTGTATACCTTCCGGTGGCTAAGTTGTAC ACATATAAAAGAACAGTGGGAACTCTCCGCTGA
Protein sequence (LotjaGi6g1v0131400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTEDDNYTKDGTVDYLGNPANKKQTGTWKACPFILGNECCERLAYYGMSTNLVLYFKKQLNQHSATASKNVSNWSGTCYI TPLIGAFLADSYLGRYWTIACFSIIYVIGMTLLTLSASVPGIKPTCHGEENCHATDGQSAVCFVALYLIALGTGGIKPCV SSYGADQFDDADVVEKEHKSSFFNWFYFSINIGALIASSLLVWIQDNVGWGWGFGIPAVAMAVAVVSFFSGTRLYRNQKP GGSPLTRMCQVVVASMRKCGVQAPDDKSLLYEIADTESAIKGSRKLDHTNELSFFDKAAVVVQSSDQKDSVDPWRLCTVT QVEELKSILRMLPVWATGIIFATVYGQMSTLFVLQGQTMNTHVGNSNFKIPPAALSIFDTLSVIFWVPVYDWIIVPIARK FSGHKNGLTQLQRMGIGLFISIFAMVAAAILEVIRLRMVRRHNYYELKEVPMSIFWQVPQYFLIGCAEVFTFIGQLEFFY EQAPDAMRSLSSALSLLTVSLGQYLSSLLVTIVTKISTKNGGSGWIPDNLNYGHVDYFFWLLAVLSVLNLIVYLPVAKLY TYKRTVGTLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 567 | 567 | 2.8E-227 | – | |
| Phobius | 1 | 95 | 95 | - | – | |
| PANTHER | 2 | 567 | 566 | 0.0 | – | |
| PANTHER | 2 | 567 | 566 | 0.0 | ||
| SUPERFAMILY | 19 | 563 | 545 | 6.93E-36 | ||
| CDD | 28 | 561 | 534 | 0.0 | – | |
| ProSitePatterns | 85 | 109 | 25 | - | ||
| Pfam | 96 | 526 | 431 | 3.8E-130 | ||
| Phobius | 96 | 115 | 20 | - | – | |
| TMHMM | 97 | 119 | 23 | - | – | |
| Phobius | 116 | 184 | 69 | - | – | |
| TMHMM | 139 | 161 | 23 | - | – | |
| TMHMM | 182 | 204 | 23 | - | – | |
| ProSitePatterns | 183 | 195 | 13 | - | ||
| Phobius | 185 | 204 | 20 | - | – | |
| Phobius | 205 | 209 | 5 | - | – | |
| TMHMM | 208 | 230 | 23 | - | – | |
| Phobius | 210 | 229 | 20 | - | – | |
| Phobius | 230 | 333 | 104 | - | – | |
| TMHMM | 331 | 353 | 23 | - | – | |
| Phobius | 334 | 354 | 21 | - | – | |
| Phobius | 355 | 373 | 19 | - | – | |
| TMHMM | 373 | 395 | 23 | - | – | |
| Phobius | 374 | 395 | 22 | - | – | |
| Phobius | 396 | 415 | 20 | - | – | |
| TMHMM | 416 | 438 | 23 | - | – | |
| Phobius | 416 | 434 | 19 | - | – | |
| Phobius | 435 | 453 | 19 | - | – | |
| Phobius | 454 | 473 | 20 | - | – | |
| TMHMM | 458 | 480 | 23 | - | – | |
| Phobius | 474 | 493 | 20 | - | – | |
| TMHMM | 492 | 514 | 23 | - | – | |
| Phobius | 494 | 517 | 24 | - | – | |
| Phobius | 518 | 536 | 19 | - | – | |
| Phobius | 537 | 556 | 20 | - | – | |
| TMHMM | 538 | 560 | 23 | - | – | |
| Phobius | 557 | 570 | 14 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Oligopeptide transport | The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0131400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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