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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0134500 |
| Transcript ID | LotjaGi6g1v0134500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier protein, expressed; TAIR: AT5G58970.1 uncoupling protein 2; Swiss-Prot: sp|Q9ZWG1|PUMP2_ARATH Mitochondrial uncoupling protein 2; TrEMBL-Plants: tr|A0A0B2PAD1|A0A0B2PAD1_GLYSO Mitochondrial uncoupling protein 3; Found in the gene: LotjaGi6g1v0134500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:38768156..38770876) extracted from Lotus japonicus Gifu genome v1.2.
CCATCAATGTCAGATCCCAACCGCATCTCCTTCGCTCAATCCTTCTTCTGCAGCGCCTTCGCCGCTTGCTTCGCCGAGGT ACCACCACCAGCTTCCATTCACTCCACCCACTCTCAATCAATCGCTCATTCATTCTCTTTGTTGATGCAGTTTTGCACCA TTCCTCTGGACACAGCCAAGGTGAGGCTTCAGCTCCAGAAGAAGACATCATCAGGTGCAGTTGATGATGATGATGATGGA GTGGGTTCACCCAAATACAGAGGCTTGCTAGGAACGATTAAGACCATTGCTCGAGAAGAAGGGGTTTCAGCTTTGTGGAA AGGCATTGTTCCTGGTCTGCATCGACAGTGTTTGTATGGGGGCTTGAGGATTGGACTATATGATCCTGTGAGTATAATCA AAAACATGTTTTGTTTATGTTGAAATGTTGAGTGTGTGTCCTTGGAGGAACATGGGTAGTTGTTGTTGTTGTTGTTGTAC ATATGAACTGCGCCGTCGTCGTCGACAGGTCAAAACTTTTCTTGTTGGGTCTGCATTTGCTGGAGAGACTCCTTTGTATC ACATGATTCTTGCTGCTTTGATTACTGGTTAGTGCTTTTGATTAGATTATATGTTGCTTCATTTTTACCCAATTTGATGA AAAATTAGGATTTTAGCTGTGTGTTTTACTGTCATTAGGCTTGTTGTTGTGTTTTAGATTTTTTATTTTAGTTATCAAGC AACTTATTCACCTTGATACTGTGGCACAAGACATTATCATAAATGTGAAGTAGTAATTGTATAATGTAGATTTGAATTAT TGAGTTTAAATTCAGGTAATATAGATAGTTGAATAAGATGTTGTAAATTGAGAGAAGGGAAATGTGAATTGATGAGGAGA GAGAATTAGTTAGATTTTCCTTTTTAAGTTACATTTCCTTAAAAGAAGTTAGTTAGATTTGAAAAAGTTGTAAATTAAGA GACTTAACTGCTTGCAAGTTACATTTTCCTTCTTAAAAAAGAGAATGGTTCCTTGTACAATTCAAAGTGTGGAGAATTCT ACATCTGAACATAGGTGTGGAGGTGCATTCCCCGTGTATATCTATGACTATGAGTGTTTTCTATTTATGATATGGACACA AACTGATTTTTATGAGCTTGTGATAGGTGCGTTGGCAATCACGATTGCTAATCCAACTGACCTAGTCAAAATTAGGCTTC AATCTGAAGGCCAATTACCATATGGGGTACCTAAGCGTTACTCTGGTGCTATGGATGCGTATTCAACTATATTGAGACAA GTAAGTCTTTCTTCTGATGAGTTTTTTTGCTTTGCTCCTTTCTGCATAAATTGAGCCTAACTCTATATATTTATTAAACT AGGAAGGGTTAGGGGCCTTTTGGACTGGGCTTGGCCCCAATGTTGCTCGGAATGCAATTATAAATGCGGCTGAGCTAGCT AGTTATGATCAAGTGAAGCAGGTAATCACATTATAGGGTATTCTAAATTAGACTCTGGCTATTATTCAATTTGGTTGACT GGTTGCTTTGCTTTGCAAAAAAATTAATTGCATTGCTGCTCTGATCCTTTATACTTATGCAGACAATTTTGAAAATTCCA GGATTCATGGACAATGTCTTTACTCACCTCCTAGCTGGCTTAGGTGCGGGTCTTTTTGCTGTCTTTATTGGTTCTCCAGT TGATGTGGTAGGTGTTGCCCGAGCCCCCTCTCCCTCTTTTTCTTTGCTTGCAATGCACTTGCAATTTTATATGAACATAC CATTGATAATGACAGCCCTGTTCACAATGGAATGAGACGGAAAGAGAAGGAAAGGGATTCCAAATGGTGCTTAATATTTT TGGATAACATTATAACACTCTTGCAAAGCTAAAGCTAACTATATTGGTGGGTCTTGCCGGAAAAAAGATGAAACCAAACA CTATTTATGAGGAAATTTTACTTACAAGCTTCCTTGTGAAGTTATAAGGAACTTGGTATTTTGAAATTTTATAACTGTTG CAAGATTCATCACATGGTACATGAAAGTGTTCAGTTGAACAATTTTGTTTAAACTTAATGAAGAAATACCATCAAATTTT TTAAGCGGGTGACTTATGCTGTTATACATGCTTAAAATTTTCCAGGTGAAATCCAGGATGATGGGGGATTCAACCTACAA AAGCACATTAGACTGCTTTCTCAAGACTTTGGTTAATGAGGTTTGTGCTTCCTTATTTGATTTTGTCATTGTCGTATTAT ACTTAAATCTTGAATCAAATGGAAGTTGAAAGGTTTATGGCAACAGTTTATACTAGTTTTATTTTGATTTTTGTTTTCTG TTCTGATTGTTTTATGAATGCCCCTGGTGAAGACCTCAATTATATGGGTTGACATGTGAGACATGACACAAATTTCCTAA TGCTTATTAAGAGGCTATTATTTAGGCATCACTGAATTCTCAAAATAATGACAATGAATATTAGTGCTTGTTGTAACCTT TGTTGCTCCGGTCTCAAACGAACTGAAAATTCTTTTAGCAGTTGCTGCTAGCTTGTTGGTTGGACAAAAAAGTTGGCATG AGGGTTTATGTAGAGTTTATCCTTTTCTCATCAACACTTGAACTCATGTCTTGCAGGGATTTCTAGCCTTCTATAAAGGC TTCCTTCCTAATTTTGGTCGACTTGGAGTCTGGAATGCAGTCATGTTTCTTACACTTGAACAAGTAAGATATTAAGGTTA A
CDS sequence (LotjaGi6g1v0134500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGATCCCAACCGCATCTCCTTCGCTCAATCCTTCTTCTGCAGCGCCTTCGCCGCTTGCTTCGCCGAGTTTTGCAC CATTCCTCTGGACACAGCCAAGGTGAGGCTTCAGCTCCAGAAGAAGACATCATCAGGTGCAGTTGATGATGATGATGATG GAGTGGGTTCACCCAAATACAGAGGCTTGCTAGGAACGATTAAGACCATTGCTCGAGAAGAAGGGGTTTCAGCTTTGTGG AAAGGCATTGTTCCTGGTCTGCATCGACAGTGTTTGTATGGGGGCTTGAGGATTGGACTATATGATCCTGTCAAAACTTT TCTTGTTGGGTCTGCATTTGCTGGAGAGACTCCTTTGTATCACATGATTCTTGCTGCTTTGATTACTGGTGCGTTGGCAA TCACGATTGCTAATCCAACTGACCTAGTCAAAATTAGGCTTCAATCTGAAGGCCAATTACCATATGGGGTACCTAAGCGT TACTCTGGTGCTATGGATGCGTATTCAACTATATTGAGACAAGAAGGGTTAGGGGCCTTTTGGACTGGGCTTGGCCCCAA TGTTGCTCGGAATGCAATTATAAATGCGGCTGAGCTAGCTAGTTATGATCAAGTGAAGCAGACAATTTTGAAAATTCCAG GATTCATGGACAATGTCTTTACTCACCTCCTAGCTGGCTTAGGTGCGGGTCTTTTTGCTGTCTTTATTGGTTCTCCAGTT GATGTGGTGAAATCCAGGATGATGGGGGATTCAACCTACAAAAGCACATTAGACTGCTTTCTCAAGACTTTGGTTAATGA GGGATTTCTAGCCTTCTATAAAGGCTTCCTTCCTAATTTTGGTCGACTTGGAGTCTGGAATGCAGTCATGTTTCTTACAC TTGAACAAGTAAGATATTAA
Protein sequence (LotjaGi6g1v0134500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSDPNRISFAQSFFCSAFAACFAEFCTIPLDTAKVRLQLQKKTSSGAVDDDDDGVGSPKYRGLLGTIKTIAREEGVSALW KGIVPGLHRQCLYGGLRIGLYDPVKTFLVGSAFAGETPLYHMILAALITGALAITIANPTDLVKIRLQSEGQLPYGVPKR YSGAMDAYSTILRQEGLGAFWTGLGPNVARNAIINAAELASYDQVKQTILKIPGFMDNVFTHLLAGLGAGLFAVFIGSPV DVVKSRMMGDSTYKSTLDCFLKTLVNEGFLAFYKGFLPNFGRLGVWNAVMFLTLEQVRY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 21 | 21 | 5.0 | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| PANTHER | 2 | 298 | 297 | 3.5E-175 | – | |
| PANTHER | 2 | 298 | 297 | 3.5E-175 | – | |
| SUPERFAMILY | 5 | 297 | 293 | 4.05E-75 | ||
| Pfam | 6 | 109 | 104 | 3.3E-21 | ||
| ProSiteProfiles | 7 | 107 | 101 | 26.611 | ||
| Phobius | 7 | 18 | 12 | - | – | |
| Gene3D | 10 | 299 | 290 | 2.3E-89 | ||
| PRINTS | 14 | 26 | 13 | 3.5E-10 | ||
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 118 | 95 | - | – | |
| PRINTS | 101 | 113 | 13 | 3.5E-10 | ||
| ProSiteProfiles | 117 | 208 | 92 | 27.125 | ||
| Pfam | 117 | 211 | 95 | 2.2E-19 | ||
| Phobius | 119 | 137 | 19 | - | – | |
| Phobius | 138 | 218 | 81 | - | – | |
| PRINTS | 171 | 188 | 18 | 3.5E-10 | ||
| PRINTS | 214 | 232 | 19 | 3.5E-10 | ||
| ProSiteProfiles | 217 | 299 | 83 | 24.701 | ||
| Pfam | 218 | 298 | 81 | 2.8E-18 | ||
| Phobius | 219 | 238 | 20 | - | – | |
| TMHMM | 219 | 238 | 20 | - | – | |
| Phobius | 239 | 299 | 61 | - | – | |
| PRINTS | 289 | 299 | 11 | 3.5E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Mitochondrial transport | Transport of substances into, out of or within a mitochondrion. | ||
| Cellular component | Mitochondrial membrane | Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope. |
Expression pattern of LotjaGi6g1v0134500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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