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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0137700 |
| Transcript ID | LotjaGi6g1v0137700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vacuolar cation/proton exchanger, putative; TAIR: AT1G55730.1 cation exchanger 5; Swiss-Prot: sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5; TrEMBL-Plants: tr|K7LAF5|K7LAF5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0137700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:40187477..40194167) extracted from Lotus japonicus Gifu genome v1.2.
GTGCTTGGAAATCACTATTTCTCCTCTAAAAAACTCTACTTGAAGAATTGCTTCTTTTCCTTGAACTGGAAGGTCTATGA AGAGCTTGCTTTGAAGAGATTTTAGGTATTATCCTTTCTTCACCATTTAAATGCACATTGCTCTTACTCTTATTTACCCT TAATTGCTCGTTGTAGCATTATAAACATTATTATTATCTGATCGGGATAAATCTGACCCCTTCCCCTGTTGCCGCCTACG TATATAGGATATTTTAAGAAATTAACCTTATAATAAGAAGAAGCATTAGAAACAGATTCATGAACTAGAAAAACAAGAAA TGTAGATACTGGGTGCCTTGTCTTTTTTTTCTCCTTTCTTTTTTCCTTCTCCTGTATGTTCCATTAATGTAGGTTAAGGT TTTGCCTTTGTTTCACTTGCTTGGGCTTTAGTTTTTTTTTTTCTTTCATGAATCTTCTTCCTTTTATTTTGTATCCTAAT TGGGCCTCTCGGCCAGTACATTTATTTTTCCCTTTCTTATTAATAAATAAAGAACATGATTAGAGCTTATTTATTTACTA ATAATAGTAACCGAAGAAAAGGCAAAATGAAGAAACGGCAGCAGAAAACACTTGAAACTTCCTTTTCAATATCCATAAAT TAACGAGACTGAAACACCTGTGTTTCTTCTCAAGTCTTCCCTCACCAAAAAAAATAACCACCACTGTCATAATTCTGGGA GGCTTAAATGGAGACTCCAGTCGAAGTCAAACCAACTCTTAGGCAAGATCTTATACTAGATACTTCAATTTTTGTTCTTT AATATTTAACTCTCTTTTGTCTTGTCATTTATTCATAGTAAATGTCCATTTGTTTGTTCCATAACATAAACATATTCCCT CGTGGTTTTTTTATGACTATAATAAAGTTTCTCCCTCTAATGTTCTCTCTGACTCTCTCTCTTTATGGGCAGTGCATCTG GATTCTTAGATGACTTGTCTAGCACTTGCAAGGTGAGTTCTTTTTCTCGTTTTGATGAACCCTTTGTAAAGTTATTTTGA ATTTTGAATTTGGGGTGATGTTTTACTTTAAAAAAAATTTGTGTTGCATTTTTTCAAGACTAGGAGTTTCCAATGTTTGT GGGTGTTTATGATTATGAATGTTCTGTTTTGTTAGCCGTGTCTAAAATTCAGAACTTTTTGATTTATGCATTTGTGATGT GGGAGAGATTTGGTTAATTTTCCACTAGACAATTGATGGCATGTGAAGTTTAGTGAAAGGGTTCAACTTTCAAGTGTCAA ATGCCATAATGTTTGATTGTTCTTTTCCCCTTTTCTTTCTGTATGAGTCAATGTTTCCTTTGGAACATTTTGAAAATAAT TCATATAATTGGAAATATTTGGCTACTTGTCATGTAATCATAGTGCACCATCCACTATCTGTGTCACAGATGGATTGTCC AAATGGAACACTATTGCACAAGTCTGAGGCTGAGGTTCCATTTGGCCCTGAAATCAATTTTCACCAGTCAGAATCTACTC TGGTGGGTGTTCATGGATCACAATCTGGAGTTTCGCGGGCTGCTCATCATCAAACGTTGAGGGGTACGATTTACAGGAGC ATCCGGGTTGTAGTTTTCTCTAACAGATTCAACTTGCTTATGCCTTTTGGGCCTCTTGCAATTCTTGTACATAATTTGAC TGGTCATAATGTGAGTTTTAATTCTTGTAATTCTTAACTTTCCCGCACTTCTGGTTATATATCTTATATTGATTTGTTAA AGTGGACTGCAGGGATGGGTCTTTGCTCTGAGTTTATTGGGTATAATGCCTCTGGCGGAGCGGCTAGGTTATGCTACAGA GTAATATTGCATGTTCCCTTCAATGGTTTTCTCAAGATTTTCACTTTTTTATGGTTTCTGACCTTACTCTTTTATTGGTC TTATATAGGCAGCTAGCATTTTACACTGGAGATACTGGTAAAGTAATAGCATTCTACTCAATTTATCTAACTCTAAATCA GCCCAGAACAGATTCTGATTTAAGTTAAAACACAGATATTGAATGCAATACAATATGTTTGCGCCTGTGCATTTTTGTTA CCAGTTTAATAGATGTTGCTTTTATATGTCTTGGTAACTAAGTACTAGGAGAAACCTCTCTAGCATATTTCATTTGAGAA TATTTATTCCATGCTGTAGGAAATATATGGATTCAATAAGCATGCAGTATCTAAGTGGTTCATTATTGTTTCTAGTCATA TGCTTGGTGTGGTTTGTTTCTCATTTTATTCTATTGCATCTTGCAGTTGGGGGTCTCTTAAACGCTACGTTTGGAAATGC AACAGAATTGATCATCTCAATATATGCACTGAAAAGTGGAATGACTCAGGTTGTCAAGCTCTCTCTACTGGGCTCAATTT TGTCAAACATGTTGCTGGTGCTTGGATGTGCATTCTTATGTGGTGGGATTGTATTTCATGAGAAGGCGCAGGTGTTTAAT AAGGTAAACATGTTAATTTTAGCAACTTTCATAATAATCCTGATTTTCATTTGTAACCCTTAGCTGATTCAATTTAGCAT CCAGGCAACTGCTTCTGTGAACTCAGGATTGTTGCTGATGGCAGTCATGGGCCTATTTTTTCCTACTGCTCTACATTACA CACACACGGAAGTCCATTTGGGGAAATCAGAGTTGTGGCTTTCAAGATTCAGTAGCTGTGTCATGCTTGCAGCCTACACT GCTTACCTATTTTTTCAGTTAAGAAGTGAAAGAAGTCCCTACGTCTCTGTGAACGAGGTTAGCAGTCTTATATCAAGTTT CATTTTTTGCTTCCTCAGTTATTCATTTTCTTTTTTTGTGTGCATATGTTGCTTGTGGTATGGCACATGAATATGTGATA ATGTTGATTTGCTTGTTCTATAGGTAGGGAATCATAGTCAAAATTTTAAGAGGGGGGGAGGGGGGGGGGTGCGGAGCAGC AAAGTCTCAGTAGGAATTTATTCGGAAGGCTTGTTTGTTATTTGTTATAGCCTTTAAGAGAAACTTCATTGTACATTCAA AAGATCTGTCTGGCATTTCTTCTCACTTCAGGAAGGGGGATTAAATGGAGGAAGATTATAATTGGTGCCATGTAGTTCTA AGCTTCATGCTGATCATTAAGATTGTTTCATATTTTTATTCCTTGGAATTATTATGAAAAAGATTTATCTCAATTGCCAG AATATTATTACCTGTAAGTGAATAGATGCAGGTGAATAATTAAAATAACTATTACATTGTTTTCAATTTTTTTTTAATTG AAAACAATTATATTTCTATTCAACATTAATTTTTATATTTTATTTGACTTTGATGTTCATTATCGGGATAAGATATTTTA TCATATGTTTTATTTATCTCCTTTTCATGCTTGAATTAGCATTTTGGCTCACCAAGATGTGTTACCGTGATGTGAATTCA GGAAGAGGGTCAGAGTGGAAACGACTCAAATGATGAATCTCCAGATATTTCTAAATGGGAATCAATAATCTGGCTTTTAG TTATGACTGCTTGGATATCAATCTTGTCAGAATATTTGGTTGGCGCTATAGAGGTGGATAATGTTCACGTTGTCAGCTGT TTGAGATTTTTATGTCTGTTTTCTTTTTCTACCATTGGTATCTCTAGTCACTGATATATATTACACAAGCATACCTTTCC AAATTGTATTAGTAGAAGTTAGTGGAATTGAAGTAGATTCCTTGAGAGTTCACATTTCTGACTGATAATATATCCACTCC ATAGTATATCATCTTTATATAAGTCTTCAAATGCTGGTTTGTCAAGAACTAAGCTGTGTTTATCATTAACAATACCTAGA TAATGAGGATGATCTACATTTATTAATATTAGAGGCCTTTACTTATAGATGTAATGTTTCTGATGTTAAACTATTTCTGT CCACTAGTTAATCTTGATTTTGTCTTTAATTCATTCGAGTAGTTTATCTTATTCTTCCTTGATCATTGCCTTTGTGCTTA GCTATATGAGGCCATTCAACATATGCAGTTTTGCATTTGAAATGAAAAATGTCATGTCTTTTCAATATTTTACAAAAAAG GAGAAAAAAGACTTGCCTAAGATGTCATTGATGGGTTTTTAATAAATTTTAGTATTGTTCTTATAAGTTCACTTTTGGAG GAAATAAATCTTTCTGTTTGATAAACTGCTTCACAGGGAGCATCTACTGCTTGGAAAATTCCAGTAACATTTATTAGTGT CATATTGCTTCCACTGGTGGGGAATGCAGCTGAACATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGTGAGCT TTCAGTTTTTGTACTCACAGTCATAGAAAGAGAGAGAGAGATTCAAATTAATAGTTTTTATATTCCTTGCAGGACATTTC CTTAGGAGTAGCAATAGGGTCATCCACACAGATAGCTATATTTGTGGTAAGCATTACACTTTATGGATTAGATTGAATTA CTATCTAGAATTAGTTTTGCTTTAGTAAATAGACAATGCTTTCTCTAATTTCAGTTTTTATGCGTATGTGGATATCTGTG CTGTTATGCAAACATGATAAGTCTTAAAGTGGAATTTAGTTAGTGTCCAACACATTGAACTTTATTGAAAGGTTGGCATC ATGTCAGAAAAAGACAGATTTTTTTTTGTAGGATTAACACATAACAAGAATATCTGGATTAAATCAAGTCATGAAACAAC AAAATATATTCAGCTTCTTCTGGTCTGCCCTGTGAAATTCCATTTCTATCTTGGACGGTTTGTTCATTAAAGAATGACAG ATGCCTCCTTACAATACAATATTCTCTCACCCATTCTCTACGGCTAGTGAGTTGAATTTTAGAGAGCCGAGAAGGGAAAA GGGAGACCTATGAGAAACTCTCCCCTTGTTTGTGAGTTAAAAAAAAAAAAGTGAAGTTAAGTTATTTGGGGTTTTTGTCA AATTTCTGAAAACCTTCCAAGTCCATCAAGTTATTTCATTGAGTTTCCCTGAATTAGGGATTTTTGTCAAAATTTGAACG GCTTAACAAGTGGAGAGCTTACCCTCCCTAGAATCAAAATTATATTTCTCTTGTGACTCGTCTACCCTCCCTCCCTCTCT TCTCTCTGTGAAAGCTAAGAAATTTTAGTATGGCTAGTACATGAATCTATGAAAGACCTCATAATTCATATTTTGTAATG GAGAAGAGTGAGAGTTTGACTTCTTTAATAGCATATAGTTCTGTATCAGTTTTCAACTTCCATCATCTTTTTTAATTATG ATGTTATCTGTTTCCTTAATACTTTCCTTTTGATTATGCAGATACCATTTTGTGTGGTTCTTGGATGGATAATGGGAAAC CCTATGGACCTAAACTTTCAACTTTTTGAGACTGGATCACTGTTTCTAACTGTTTTAGTAGTAGCCTTCATGTTGCAGGT TTGTATTCAAGGATAAAAAAAAATGAAAGATAAATTTGTGTATGCGATCATTATGGTATTAGGAGCCTCAAACATATTGA TAATAAACTCCAATTTGATTATCACTGTTGTTGATAAAAGTCTCATTTTGACATCTATTATGCTTTTGCAGGAAGGAACT GCTAATTACTTCAAAGGAATAGTGCTAATTTTCTGCTATCTGATAGTGGCAGCAGGTTTTTATGTACATGTAGACTCATC AGTGTAGGTTAGGAAATAACTTTCACATCACGTTTAGTTTTCTCTGGTAATTTCTATTTTTTAAGATGAGGTTTGTTCCC TGATGCAAATGTGAGGAATTAGTTGTGCTTTGTAGATGTCATAGGTATCTTGCTGGTCAGATTGCTTTTTGTTCTAAACA AGGTTCAGTTTCAACCTATGTATGCCAGAATATGGAGAAATGTAATTACTAATAAGGCAATATAAGGCAAGTCCAATTTG AGTTGGCAAAGTATCATCCTAAACTTCATGATACACATAAAAGTACAAAAGTTCTTGGAGAAATTAATTGGTACACTTTT GTATAGCTGAGTTCCAAGATGAACAACTTTTTTTTTTTAAGGCACAAGATGAACAACTTTATGTATATTTAGAAGGGCTA GTTTGTTGAGTTACTTCATGGCTACCTAAGATATTTTCCTAGTTGAATGACAAATATGTTATGCACGATGATGTGGTGTT TGGATACCAGTTGAGTATAGCGTGAACGTACTTTCATTTCAATTTATATGAAGAGTTTTGCTGACTTTTTGTCTCAAAGT GTGGGCTAACATCTGCTTGCACTAGTGTCCTTGATATCTTAACATAGTCAATATCATCAATGCCAGCAATGGAACAAGGT AATGTTGTCATAGCTTGCAATGGTGAGAAATATTTTATTATGAGCAAGGAATCTTGTGGCCATAGCTCCAGAACGATTGT TTAGACATTGAGTTACTTGAAAGGGAAGATTAGAAGATTGCACACAAGTTGTAATTCAGAAATGTCTCGTTTGTTTCCAC AAATTAACAAGAGCTTACAACTTTGTCCCCTTCCTTCTGTTGAATCATTCAACTCAACTTAAACAATTCAACACAGCCAA ATTCTGGGTTCCATCCAATCCTAATTTAAAGGTTATTAATAGTTTTTTTATTGGCTTGAATAAGCTTTTAGTTCTCAATT TCATACTCAAATTTGGCTTTAGTCCGCACCATCTAATTTTTACAGTTTTGC
CDS sequence (LotjaGi6g1v0137700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCAGTGCATCTGGATTCTTAGATGACTTGTCTAGCACTTGCAAGATGGATTGTCCAAATGGAACACTATTGCACAA GTCTGAGGCTGAGGTTCCATTTGGCCCTGAAATCAATTTTCACCAGTCAGAATCTACTCTGGTGGGTGTTCATGGATCAC AATCTGGAGTTTCGCGGGCTGCTCATCATCAAACGTTGAGGGGTACGATTTACAGGAGCATCCGGGTTGTAGTTTTCTCT AACAGATTCAACTTGCTTATGCCTTTTGGGCCTCTTGCAATTCTTGTACATAATTTGACTGGTCATAATGGATGGGTCTT TGCTCTGAGTTTATTGGGTATAATGCCTCTGGCGGAGCGGCTAGGTTATGCTACAGAGCAGCTAGCATTTTACACTGGAG ATACTGTTGGGGGTCTCTTAAACGCTACGTTTGGAAATGCAACAGAATTGATCATCTCAATATATGCACTGAAAAGTGGA ATGACTCAGGTTGTCAAGCTCTCTCTACTGGGCTCAATTTTGTCAAACATGTTGCTGGTGCTTGGATGTGCATTCTTATG TGGTGGGATTGTATTTCATGAGAAGGCGCAGGTGTTTAATAAGGCAACTGCTTCTGTGAACTCAGGATTGTTGCTGATGG CAGTCATGGGCCTATTTTTTCCTACTGCTCTACATTACACACACACGGAAGTCCATTTGGGGAAATCAGAGTTGTGGCTT TCAAGATTCAGTAGCTGTGTCATGCTTGCAGCCTACACTGCTTACCTATTTTTTCAGTTAAGAAGTGAAAGAAGTCCCTA CGTCTCTGTGAACGAGGAAGAGGGTCAGAGTGGAAACGACTCAAATGATGAATCTCCAGATATTTCTAAATGGGAATCAA TAATCTGGCTTTTAGTTATGACTGCTTGGATATCAATCTTGTCAGAATATTTGGTTGGCGCTATAGAGGGAGCATCTACT GCTTGGAAAATTCCAGTAACATTTATTAGTGTCATATTGCTTCCACTGGTGGGGAATGCAGCTGAACATGCCAGTGCTAT AATGTTTGCCATGAAAGATAAACTTGACATTTCCTTAGGAGTAGCAATAGGGTCATCCACACAGATAGCTATATTTGTGA TACCATTTTGTGTGGTTCTTGGATGGATAATGGGAAACCCTATGGACCTAAACTTTCAACTTTTTGAGACTGGATCACTG TTTCTAACTGTTTTAGTAGTAGCCTTCATGTTGCAGGAAGGAACTGCTAATTACTTCAAAGGAATAGTGCTAATTTTCTG CTATCTGATAGTGGCAGCAGGTTTTTATGTACATGTAGACTCATCAGTGTAG
Protein sequence (LotjaGi6g1v0137700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSASGFLDDLSSTCKMDCPNGTLLHKSEAEVPFGPEINFHQSESTLVGVHGSQSGVSRAAHHQTLRGTIYRSIRVVVFS NRFNLLMPFGPLAILVHNLTGHNGWVFALSLLGIMPLAERLGYATEQLAFYTGDTVGGLLNATFGNATELIISIYALKSG MTQVVKLSLLGSILSNMLLVLGCAFLCGGIVFHEKAQVFNKATASVNSGLLLMAVMGLFFPTALHYTHTEVHLGKSELWL SRFSSCVMLAAYTAYLFFQLRSERSPYVSVNEEEGQSGNDSNDESPDISKWESIIWLLVMTAWISILSEYLVGAIEGAST AWKIPVTFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQIAIFVIPFCVVLGWIMGNPMDLNFQLFETGSL FLTVLVVAFMLQEGTANYFKGIVLIFCYLIVAAGFYVHVDSSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 75 | 75 | - | – | |
| PANTHER | 25 | 442 | 418 | 2.6E-220 | – | |
| PANTHER | 25 | 442 | 418 | 2.6E-220 | – | |
| TIGRFAM | 74 | 436 | 363 | 3.5E-117 | ||
| Phobius | 76 | 99 | 24 | - | – | |
| TIGRFAM | 87 | 436 | 350 | 4.1E-101 | ||
| TMHMM | 92 | 114 | 23 | - | – | |
| Phobius | 100 | 104 | 5 | - | – | |
| Pfam | 105 | 260 | 156 | 1.0E-20 | ||
| Phobius | 105 | 123 | 19 | - | – | |
| Gene3D | 109 | 325 | 217 | 8.3E-25 | – | |
| Phobius | 124 | 134 | 11 | - | – | |
| Gene3D | 134 | 429 | 296 | 8.3E-25 | – | |
| TMHMM | 135 | 157 | 23 | - | – | |
| Phobius | 135 | 157 | 23 | - | – | |
| Phobius | 158 | 168 | 11 | - | – | |
| Phobius | 169 | 192 | 24 | - | – | |
| TMHMM | 170 | 192 | 23 | - | – | |
| Phobius | 193 | 203 | 11 | - | – | |
| Phobius | 204 | 226 | 23 | - | – | |
| TMHMM | 205 | 224 | 20 | - | – | |
| Phobius | 227 | 237 | 11 | - | – | |
| Phobius | 238 | 258 | 21 | - | – | |
| TMHMM | 239 | 258 | 20 | - | – | |
| Phobius | 259 | 293 | 35 | - | – | |
| TMHMM | 293 | 315 | 23 | - | – | |
| Pfam | 293 | 434 | 142 | 1.2E-21 | ||
| Phobius | 294 | 315 | 22 | - | – | |
| Phobius | 316 | 320 | 5 | - | – | |
| Phobius | 321 | 338 | 18 | - | – | |
| TMHMM | 325 | 347 | 23 | - | – | |
| Phobius | 339 | 358 | 20 | - | – | |
| Phobius | 359 | 384 | 26 | - | – | |
| TMHMM | 360 | 382 | 23 | - | – | |
| Phobius | 385 | 389 | 5 | - | – | |
| Phobius | 390 | 411 | 22 | - | – | |
| TMHMM | 392 | 411 | 20 | - | – | |
| Phobius | 412 | 417 | 6 | - | – | |
| Phobius | 418 | 439 | 22 | - | – | |
| TMHMM | 418 | 437 | 20 | - | – | |
| Phobius | 440 | 443 | 4 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Biological process | Calcium ion transport | The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. | ||
| Molecular function | Calcium:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + H+(out) = Ca2+(out) + H+(in). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0137700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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