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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0137700 |
| Transcript ID | LotjaGi6g1v0137700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vacuolar cation/proton exchanger, putative; TAIR: AT1G55730.1 cation exchanger 5; Swiss-Prot: sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5; TrEMBL-Plants: tr|K7LAF5|K7LAF5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0137700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:40187779..40193592) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAGGCAAAATGAAGAAACGGCAGCAGAAAACACTTGAAACTTCCTTTTCAATATCCATAAATTAACGAGACTGAAAC ACCTGTGTTTCTTCTCAAGTCTTCCCTCACCAAAAAAAATAACCACCACTGTCATAATTCTGGGAGGCTTAAATGGAGAC TCCAGTCGAAGTCAAACCAACTCTTAGGCAAGATCTTATACTAGATACTTCAATTTTTGTTCTTTAATATTTAACTCTCT TTTGTCTTGTCATTTATTCATAGTAAATGTCCATTTGTTTGTTCCATAACATAAACATATTCCCTCGTGGTTTTTTTATG ACTATAATAAAGTTTCTCCCTCTAATGTTCTCTCTGACTCTCTCTCTTTATGGGCAGTGCATCTGGATTCTTAGATGACT TGTCTAGCACTTGCAAGGTGAGTTCTTTTTCTCGTTTTGATGAACCCTTTGTAAAGTTATTTTGAATTTTGAATTTGGGG TGATGTTTTACTTTAAAAAAAATTTGTGTTGCATTTTTTCAAGACTAGGAGTTTCCAATGTTTGTGGGTGTTTATGATTA TGAATGTTCTGTTTTGTTAGCCGTGTCTAAAATTCAGAACTTTTTGATTTATGCATTTGTGATGTGGGAGAGATTTGGTT AATTTTCCACTAGACAATTGATGGCATGTGAAGTTTAGTGAAAGGGTTCAACTTTCAAGTGTCAAATGCCATAATGTTTG ATTGTTCTTTTCCCCTTTTCTTTCTGTATGAGTCAATGTTTCCTTTGGAACATTTTGAAAATAATTCATATAATTGGAAA TATTTGGCTACTTGTCATGTAATCATAGTGCACCATCCACTATCTGTGTCACAGATGGATTGTCCAAATGGAACACTATT GCACAAGTCTGAGGCTGAGGTTCCATTTGGCCCTGAAATCAATTTTCACCAGTCAGAATCTACTCTGGTGGGTGTTCATG GATCACAATCTGGAGTTTCGCGGGCTGCTCATCATCAAACGTTGAGGGGTACGATTTACAGGAGCATCCGGGTTGTAGTT TTCTCTAACAGATTCAACTTGCTTATGCCTTTTGGGCCTCTTGCAATTCTTGTACATAATTTGACTGGTCATAATGTGAG TTTTAATTCTTGTAATTCTTAACTTTCCCGCACTTCTGGTTATATATCTTATATTGATTTGTTAAAGTGGACTGCAGGGA TGGGTCTTTGCTCTGAGTTTATTGGGTATAATGCCTCTGGCGGAGCGGCTAGGTTATGCTACAGAGTAATATTGCATGTT CCCTTCAATGGTTTTCTCAAGATTTTCACTTTTTTATGGTTTCTGACCTTACTCTTTTATTGGTCTTATATAGGCAGCTA GCATTTTACACTGGAGATACTGGTAAAGTAATAGCATTCTACTCAATTTATCTAACTCTAAATCAGCCCAGAACAGATTC TGATTTAAGTTAAAACACAGATATTGAATGCAATACAATATGTTTGCGCCTGTGCATTTTTGTTACCAGTTTAATAGATG TTGCTTTTATATGTCTTGGTAACTAAGTACTAGGAGAAACCTCTCTAGCATATTTCATTTGAGAATATTTATTCCATGCT GTAGGAAATATATGGATTCAATAAGCATGCAGTATCTAAGTGGTTCATTATTGTTTCTAGTCATATGCTTGGTGTGGTTT GTTTCTCATTTTATTCTATTGCATCTTGCAGTTGGGGGTCTCTTAAACGCTACGTTTGGAAATGCAACAGAATTGATCAT CTCAATATATGCACTGAAAAGTGGAATGACTCAGGTTGTCAAGCTCTCTCTACTGGGCTCAATTTTGTCAAACATGTTGC TGGTGCTTGGATGTGCATTCTTATGTGGTGGGATTGTATTTCATGAGAAGGCGCAGGTGTTTAATAAGGTAAACATGTTA ATTTTAGCAACTTTCATAATAATCCTGATTTTCATTTGTAACCCTTAGCTGATTCAATTTAGCATCCAGGCAACTGCTTC TGTGAACTCAGGATTGTTGCTGATGGCAGTCATGGGCCTATTTTTTCCTACTGCTCTACATTACACACACACGGAAGTCC ATTTGGGGAAATCAGAGTTGTGGCTTTCAAGATTCAGTAGCTGTGTCATGCTTGCAGCCTACACTGCTTACCTATTTTTT CAGTTAAGAAGTGAAAGAAGTCCCTACGTCTCTGTGAACGAGGTTAGCAGTCTTATATCAAGTTTCATTTTTTGCTTCCT CAGTTATTCATTTTCTTTTTTTGTGTGCATATGTTGCTTGTGGTATGGCACATGAATATGTGATAATGTTGATTTGCTTG TTCTATAGGTAGGGAATCATAGTCAAAATTTTAAGAGGGGGGGAGGGGGGGGGGTGCGGAGCAGCAAAGTCTCAGTAGGA ATTTATTCGGAAGGCTTGTTTGTTATTTGTTATAGCCTTTAAGAGAAACTTCATTGTACATTCAAAAGATCTGTCTGGCA TTTCTTCTCACTTCAGGAAGGGGGATTAAATGGAGGAAGATTATAATTGGTGCCATGTAGTTCTAAGCTTCATGCTGATC ATTAAGATTGTTTCATATTTTTATTCCTTGGAATTATTATGAAAAAGATTTATCTCAATTGCCAGAATATTATTACCTGT AAGTGAATAGATGCAGGTGAATAATTAAAATAACTATTACATTGTTTTCAATTTTTTTTTAATTGAAAACAATTATATTT CTATTCAACATTAATTTTTATATTTTATTTGACTTTGATGTTCATTATCGGGATAAGATATTTTATCATATGTTTTATTT ATCTCCTTTTCATGCTTGAATTAGCATTTTGGCTCACCAAGATGTGTTACCGTGATGTGAATTCAGGAAGAGGGTCAGAG TGGAAACGACTCAAATGATGAATCTCCAGATATTTCTAAATGGGAATCAATAATCTGGCTTTTAGTTATGACTGCTTGGA TATCAATCTTGTCAGAATATTTGGTTGGCGCTATAGAGGTGGATAATGTTCACGTTGTCAGCTGTTTGAGATTTTTATGT CTGTTTTCTTTTTCTACCATTGGTATCTCTAGTCACTGATATATATTACACAAGCATACCTTTCCAAATTGTATTAGTAG AAGTTAGTGGAATTGAAGTAGATTCCTTGAGAGTTCACATTTCTGACTGATAATATATCCACTCCATAGTATATCATCTT TATATAAGTCTTCAAATGCTGGTTTGTCAAGAACTAAGCTGTGTTTATCATTAACAATACCTAGATAATGAGGATGATCT ACATTTATTAATATTAGAGGCCTTTACTTATAGATGTAATGTTTCTGATGTTAAACTATTTCTGTCCACTAGTTAATCTT GATTTTGTCTTTAATTCATTCGAGTAGTTTATCTTATTCTTCCTTGATCATTGCCTTTGTGCTTAGCTATATGAGGCCAT TCAACATATGCAGTTTTGCATTTGAAATGAAAAATGTCATGTCTTTTCAATATTTTACAAAAAAGGAGAAAAAAGACTTG CCTAAGATGTCATTGATGGGTTTTTAATAAATTTTAGTATTGTTCTTATAAGTTCACTTTTGGAGGAAATAAATCTTTCT GTTTGATAAACTGCTTCACAGGGAGCATCTACTGCTTGGAAAATTCCAGTAACATTTATTAGTGTCATATTGCTTCCACT GGTGGGGAATGCAGCTGAACATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGTGAGCTTTCAGTTTTTGTACT CACAGTCATAGAAAGAGAGAGAGAGATTCAAATTAATAGTTTTTATATTCCTTGCAGGACATTTCCTTAGGAGTAGCAAT AGGGTCATCCACACAGATAGCTATATTTGTGGTAAGCATTACACTTTATGGATTAGATTGAATTACTATCTAGAATTAGT TTTGCTTTAGTAAATAGACAATGCTTTCTCTAATTTCAGTTTTTATGCGTATGTGGATATCTGTGCTGTTATGCAAACAT GATAAGTCTTAAAGTGGAATTTAGTTAGTGTCCAACACATTGAACTTTATTGAAAGGTTGGCATCATGTCAGAAAAAGAC AGATTTTTTTTTGTAGGATTAACACATAACAAGAATATCTGGATTAAATCAAGTCATGAAACAACAAAATATATTCAGCT TCTTCTGGTCTGCCCTGTGAAATTCCATTTCTATCTTGGACGGTTTGTTCATTAAAGAATGACAGATGCCTCCTTACAAT ACAATATTCTCTCACCCATTCTCTACGGCTAGTGAGTTGAATTTTAGAGAGCCGAGAAGGGAAAAGGGAGACCTATGAGA AACTCTCCCCTTGTTTGTGAGTTAAAAAAAAAAAAGTGAAGTTAAGTTATTTGGGGTTTTTGTCAAATTTCTGAAAACCT TCCAAGTCCATCAAGTTATTTCATTGAGTTTCCCTGAATTAGGGATTTTTGTCAAAATTTGAACGGCTTAACAAGTGGAG AGCTTACCCTCCCTAGAATCAAAATTATATTTCTCTTGTGACTCGTCTACCCTCCCTCCCTCTCTTCTCTCTGTGAAAGC TAAGAAATTTTAGTATGGCTAGTACATGAATCTATGAAAGACCTCATAATTCATATTTTGTAATGGAGAAGAGTGAGAGT TTGACTTCTTTAATAGCATATAGTTCTGTATCAGTTTTCAACTTCCATCATCTTTTTTAATTATGATGTTATCTGTTTCC TTAATACTTTCCTTTTGATTATGCAGATACCATTTTGTGTGGTTCTTGGATGGATAATGGGAAACCCTATGGACCTAAAC TTTCAACTTTTTGAGACTGGATCACTGTTTCTAACTGTTTTAGTAGTAGCCTTCATGTTGCAGGTTTGTATTCAAGGATA AAAAAAAATGAAAGATAAATTTGTGTATGCGATCATTATGGTATTAGGAGCCTCAAACATATTGATAATAAACTCCAATT TGATTATCACTGTTGTTGATAAAAGTCTCATTTTGACATCTATTATGCTTTTGCAGGAAGGAACTGCTAATTACTTCAAA GGAATAGTGCTAATTTTCTGCTATCTGATAGTGGCAGCAGGTTTTTATGTACATGTAGACTCATCAGTGTAGGTTAGGAA ATAACTTTCACATCACGTTTAGTTTTCTCTGGTAATTTCTATTTTTTAAGATGAGGTTTGTTCCCTGATGCAAATGTGAG GAATTAGTTGTGCTTTGTAGATGTCATAGGTATCTTGCTGGTCAGATTGCTTTTTGTTCTAAACAAGGTTCAGTTTCAAC CTATGTATGCCAGAATATGGAGAAATGTAATTACTAATAAGGCAATATAAGGCAAGTCCAATTTGAGTTGGCAAAGTATC ATCCTAAACTTCATGATACACATAAAAGTACAAAAGTTCTTGGAGAAATTAATTGGTACACTTTTGTATAGCTGAGTTCC AAGATGAACAACTTTTTTTTTTTAAGGCACAAGATGAACAACTTTATGTATATTTAGAAGGGCTAGTTTGTTGAGTTACT TCATGGCTACCTAAGATATTTTCCTAGTTGAATGACAAATATGTTATGCACGATGATGTGGTGTTTGGATACCAGTTGAG TATAGCGTGAACGTACTTTCATTTCAATTTATATGAAGAGTTTTGCTGACTTTTTGTCTCAAAGTGTGGGCTAACATCTG CTTGCACTAGTGTCCTTGATATCTTAACATAGTCAATATCATCAATGCCAGCAATGGAACAAGGTAATGTTGTCATAGCT TGCAATGGTGAGAAATATTTTATTATGAGCAAGGAATCTTGTGGCCATAGCTCC
CDS sequence (LotjaGi6g1v0137700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGACTCCAGTCGAAGTCAAACCAACTCTTAGTGCATCTGGATTCTTAGATGACTTGTCTAGCACTTGCAAGATGGA TTGTCCAAATGGAACACTATTGCACAAGTCTGAGGCTGAGGTTCCATTTGGCCCTGAAATCAATTTTCACCAGTCAGAAT CTACTCTGGTGGGTGTTCATGGATCACAATCTGGAGTTTCGCGGGCTGCTCATCATCAAACGTTGAGGGGTACGATTTAC AGGAGCATCCGGGTTGTAGTTTTCTCTAACAGATTCAACTTGCTTATGCCTTTTGGGCCTCTTGCAATTCTTGTACATAA TTTGACTGGTCATAATGGATGGGTCTTTGCTCTGAGTTTATTGGGTATAATGCCTCTGGCGGAGCGGCTAGGTTATGCTA CAGAGCAGCTAGCATTTTACACTGGAGATACTGTTGGGGGTCTCTTAAACGCTACGTTTGGAAATGCAACAGAATTGATC ATCTCAATATATGCACTGAAAAGTGGAATGACTCAGGTTGTCAAGCTCTCTCTACTGGGCTCAATTTTGTCAAACATGTT GCTGGTGCTTGGATGTGCATTCTTATGTGGTGGGATTGTATTTCATGAGAAGGCGCAGGTGTTTAATAAGGCAACTGCTT CTGTGAACTCAGGATTGTTGCTGATGGCAGTCATGGGCCTATTTTTTCCTACTGCTCTACATTACACACACACGGAAGTC CATTTGGGGAAATCAGAGTTGTGGCTTTCAAGATTCAGTAGCTGTGTCATGCTTGCAGCCTACACTGCTTACCTATTTTT TCAGTTAAGAAGTGAAAGAAGTCCCTACGTCTCTGTGAACGAGGAAGAGGGTCAGAGTGGAAACGACTCAAATGATGAAT CTCCAGATATTTCTAAATGGGAATCAATAATCTGGCTTTTAGTTATGACTGCTTGGATATCAATCTTGTCAGAATATTTG GTTGGCGCTATAGAGGGAGCATCTACTGCTTGGAAAATTCCAGTAACATTTATTAGTGTCATATTGCTTCCACTGGTGGG GAATGCAGCTGAACATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGACATTTCCTTAGGAGTAGCAATAGGGT CATCCACACAGATAGCTATATTTGTGATACCATTTTGTGTGGTTCTTGGATGGATAATGGGAAACCCTATGGACCTAAAC TTTCAACTTTTTGAGACTGGATCACTGTTTCTAACTGTTTTAGTAGTAGCCTTCATGTTGCAGGAAGGAACTGCTAATTA CTTCAAAGGAATAGTGCTAATTTTCTGCTATCTGATAGTGGCAGCAGGTTTTTATGTACATGTAGACTCATCAGTGTAG
Protein sequence (LotjaGi6g1v0137700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
METPVEVKPTLSASGFLDDLSSTCKMDCPNGTLLHKSEAEVPFGPEINFHQSESTLVGVHGSQSGVSRAAHHQTLRGTIY RSIRVVVFSNRFNLLMPFGPLAILVHNLTGHNGWVFALSLLGIMPLAERLGYATEQLAFYTGDTVGGLLNATFGNATELI ISIYALKSGMTQVVKLSLLGSILSNMLLVLGCAFLCGGIVFHEKAQVFNKATASVNSGLLLMAVMGLFFPTALHYTHTEV HLGKSELWLSRFSSCVMLAAYTAYLFFQLRSERSPYVSVNEEEGQSGNDSNDESPDISKWESIIWLLVMTAWISILSEYL VGAIEGASTAWKIPVTFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQIAIFVIPFCVVLGWIMGNPMDLN FQLFETGSLFLTVLVVAFMLQEGTANYFKGIVLIFCYLIVAAGFYVHVDSSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 84 | 84 | - | – | |
| PANTHER | 34 | 451 | 418 | 2.8E-220 | – | |
| PANTHER | 34 | 451 | 418 | 2.8E-220 | – | |
| TIGRFAM | 83 | 445 | 363 | 3.7E-117 | ||
| Phobius | 85 | 108 | 24 | - | – | |
| TIGRFAM | 96 | 445 | 350 | 4.4E-101 | ||
| TMHMM | 101 | 123 | 23 | - | – | |
| Phobius | 109 | 113 | 5 | - | – | |
| Pfam | 114 | 269 | 156 | 1.1E-20 | ||
| Phobius | 114 | 132 | 19 | - | – | |
| Gene3D | 118 | 334 | 217 | 8.9E-25 | – | |
| Phobius | 133 | 143 | 11 | - | – | |
| Gene3D | 143 | 438 | 296 | 8.9E-25 | – | |
| TMHMM | 144 | 166 | 23 | - | – | |
| Phobius | 144 | 166 | 23 | - | – | |
| Phobius | 167 | 177 | 11 | - | – | |
| Phobius | 178 | 201 | 24 | - | – | |
| TMHMM | 179 | 201 | 23 | - | – | |
| Phobius | 202 | 212 | 11 | - | – | |
| Phobius | 213 | 235 | 23 | - | – | |
| TMHMM | 214 | 233 | 20 | - | – | |
| Phobius | 236 | 246 | 11 | - | – | |
| Phobius | 247 | 267 | 21 | - | – | |
| TMHMM | 248 | 267 | 20 | - | – | |
| Phobius | 268 | 302 | 35 | - | – | |
| TMHMM | 302 | 324 | 23 | - | – | |
| Pfam | 302 | 443 | 142 | 1.2E-21 | ||
| Phobius | 303 | 324 | 22 | - | – | |
| Phobius | 325 | 329 | 5 | - | – | |
| Phobius | 330 | 347 | 18 | - | – | |
| TMHMM | 334 | 356 | 23 | - | – | |
| Phobius | 348 | 367 | 20 | - | – | |
| Phobius | 368 | 393 | 26 | - | – | |
| TMHMM | 369 | 391 | 23 | - | – | |
| Phobius | 394 | 398 | 5 | - | – | |
| Phobius | 399 | 420 | 22 | - | – | |
| TMHMM | 401 | 420 | 20 | - | – | |
| Phobius | 421 | 426 | 6 | - | – | |
| Phobius | 427 | 448 | 22 | - | – | |
| TMHMM | 427 | 446 | 20 | - | – | |
| Phobius | 449 | 452 | 4 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Biological process | Calcium ion transport | The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. | ||
| Molecular function | Calcium:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + H+(out) = Ca2+(out) + H+(in). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0137700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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