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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0150300 |
| Transcript ID | LotjaGi6g1v0150300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein; TAIR: AT3G07040.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q39214|RPM1_ARATH Disease resistance protein RPM1; TrEMBL-Plants: tr|G7J1I4|G7J1I4_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi6g1v0150300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:42631060..42635307) extracted from Lotus japonicus Gifu genome v1.2.
CTCAATATAGAGACAGGAACAGAAGAGAAACAAACGGGATTGGGACAGATAACAAGTGATATGATAGGAAAAAAAAGAGA TAAATATGAATAAAAATTGAATGGAAATGAGATGAATAGAAAATGCCGTGTGAATTTCACATGCCCACTAAGCTATGAGG AGGGTAGGAAGTACAAACCTTGAAAAAATGTAGATCCAAACACTAATTATCAAAGTTGACTTGTTTTAGGAACGACCATG TTCTTGGGTAAGCAGCCAAAGGAGTAACTTCCATATGTTATTTATTTATTCTTTCGGAACAACTAAGAATGACAAGTTGA GTCTGAATAATGATTAAACAATGACCTGGAAAACTCAAGTCTTCTTCCTCTCACCATTGAGTCATTGACTTTAGGATATA AAGATCTTGAAGCACAAAAAGCTTCCCCTTCATCTCACCACTTAGCAGAAACCAGAGCTAGCCAGAACTGCCAGAACAAA ATGTGTGATCAAGTAGTGTCCTTGGCTCGTGAGCAATTGCTCCCACTGGCTCGTGATCATCTGCTTCCAGTGTTAAAGGA AGCAGCCAACATGATCAGGGGTGTTCCAAAAGGAGTAGCAGAAATGAAAGGTGACCTTGAAAGCATTGAAGACTTCATCA ATGATGCAGTTCGAATGGCTGAGGCTGAAGAAGACCACACGCGTGATGGGATCAAAACAAGGGTGAAGCAGCTCAGAGAA GCATCTTTTCTCATAGAAGATGTCATTGATGAATACTCCATCTGTGAGGGGCATCGGCCTCGGGATCCCGGGTGTGCTAC AATCCCCCGTGACACCGCTGGCTTCATCAAAACCATGATGCTTCGCCTTCAGATAGCCTACAAGATTCAGAACATCAAAT CAGAAGTTGATGGAATGGTGAAAGGAAGTGATAAAAGTGGCATTCAAATCCAAATTTCTTCAGAACAAGGACAGAACAGT TCTTCAGGAATTCAAAATCTCACATTGAACAACCTTCAACCGGATCCATTGAAAGATGAAGCTGAAGTTGTCGGCTTTGA AGCTCCAAGAGATGAATTGATTCGTTGGTTGGTGGAGGGAGAAGAAGCAAAGCGCACAGTCATCTCTGTGGTGGGACAGG GAGGTCAGGGGAAAACCACTCTTGCTAAGAAAGTCTATGACACTAAAGAGGTCATTGAGCACTTCCGTTGCCACGCGACG ATCACGGTGTCCAAGTCCTACAATGTAGATAGCTTGTTGAGAGACATGTTGCAGCAGTTTTGCAATGAAAGCAACAAGGA TCCTCCTCAGGCAATGGAAGGAGAGCCGTTGAGAGCTGAAGTGACAAAGCACTTGCAGGATAAGAGGTATCTCATCTTGT TTGATAATGTTTGGGACATAAATTTCTGGAAGGTGATTGAATATGCTTTGAAAGATAATAAGAAAGGAAGTAGGATATTA ATCACAACCAGGAATATGGATGTTGCTATGTCATGCAAGAGATCTTCTCTTGTTCTAGTGCATCAGCTGCAACCTTTAAG TCGAATAAAATCTTTGGAGCTGTTCTATAAGAAGGCGTTCTTTGAATTTGATGGAGATTGTCCCAAAAATCTTTTGGATG TATCTGCTAAAATTGTTGAAAAATGTGATGATTTACCTCTAGCAATTGTGGCCATTGGCGGTCTTTTATCTGGTAAAGAT AGAGATCCATTTCAATGGGAAAGGTTTAATGAAACTCTAAGTTTCGAGTTGGAGAAGAATCCTGATTTGTCTGTTATAAC AAAGATTTTAGGCTTGAGTTATCATGATTTACCTTACTACCTCAAATGGTGCTTCTTGTACTTTGGGATATATCCTGAAG ACTACGAAATCAAAGCTGATAGACTGATTAGGCAGTGGGTAGCTGAAGGGTTTGTCAAAGATGAAAAGGTGAAAACAGTG GAGGAAACTGCAGAAACATATTTAACGGACTTGATTCACAGAAGCCTGGTTCAAGTGACTTCATTAGCTAGTGATGGAAA AACTAGAAGTTGTCGTGTTCATGACCTGGTACGACAAATGATCCTTGATAAAATTCAAGATCTAAGTTTTTGCCATTTCC CTAGTAGTGAAAATGAGAAGAAACCAGTCTTTGATGGAATGGTTCGTCGCCTCACAATAGCATCCAGTTGCAACAATGGG ATGGGAAGTGTTGAAACCTCAAACATTCGGTCACTGCATATTTTCAAAAATGAAGAACTACCAGATTCCTATGTGACAAG TATCCCTTCAAGGCACAGGTTACTAAAAGTGCTTGATCTTGAAGATGTTTCCCTGTATCATCAAGTTCCTAAAAATTTGG GGGACTTGTTCCTCTTGAGGTATTTAAGCTTCAGAAATACAAAGGTAGAAAATCTTCCAGGATCCATTGGTATGCTCCTC AACCTAGAGACCTTGGATCTAAGGCAAACGCTGGTGCGCGAGTTGCCAAGAGAGATTAACATGCTTACAAAGCTAAGACA CCTTCTAGCATATGATATCTCCAAGGGAGTTGGGTATGGGATTCAACTAAAAAATGGCATTGGGGACATAGAATCCTTAC AAACTCTACGTGAAGTCGAAGCGGATCACGGTGGGATTGAGCTGATAAAAGAGCTTGAAAGGCTTACAGAGTTAAGAATG CTGGGGTTGACCAATGTGAAGGGAGAATACACAAGTGCTCTATGTTCCTCAATAAATAATAAGCAACACTTGGAGAAACT ATATATTACTGCAGTTAATGGAAAAGAGGTCATTGATTTGCATCATCATGTATCTGCACCTCGACTTAGGAAGCTTCGCC TTACTGGGAGGTTAAACAATTTCCCACACTGGGTTCGAAATCTCAACTTACTTGTTAAGTTGTCCTTGTCACACTCCATG TTAACTCATGATCCCTTGGAATCACTGAAAGATCTGACAAATTTGCAGTACCTCAGCATCCTGTACCATGCATATGATGG TGAAACTTTGCATTTTCCAGATGGGGGGTTTCGGAGCCTGAAGCAGTTAGTACTCAGGCGCTTGTATAATTTGAATTCTA TCAGTATCGGTGAAGGAGCACTGTGTTCACTGGAGAGGTTAAAGTTGGTGAATATATCCGAACTCTATGAGGTGCCTTCT GATGTCTATGACTTAAAAAAGCTTCAAGTTTTCCACATTGTGAACATGCCAGAGTTTGAGCAGAACATTGATCGCGATAT AGGAAAGTTCCAATGGATCATAGAGCAGGTGCCCTTTGTGAGCATTGCTGAACGAACTTGGGCATGAAGAAAATGTCCAA CTTTGGAAATAAAGGTGTGTTTTTTCTTCCTGATATTTGCATAATGATGTTGTTAGTAATGTCAACTGTTTAGCCTTCAA CATGAAAGTTTTATCTGATTCCCAAGATAATTTCTAGTACTTCTCTCTGTTTGGTTTTTGGTTTATTCAGCATGTTACTT TTCAGCATTTGTTAGAAATTATGAATGGTAATGTCTATTCAGCAAATAAATAAATAAATATAGCATTGTTTTCGGCTTCA AGGAGTACGGACTTGGATTTATCTTTTCATCATACACAGTCTCACCTTTTCTCTTTGGTTATATACTGATATTGTAGTTT TTTTTGTCAACTACTGATATTGTGCTTTAAATATGCAGGAAGGCATAGTGCTGCAGAATTCAGATTCTCCATGCATGCAG GCTTTCATGATGATGACATTATATGTTTAAGTTTCTGCTTTGGCCTTTGGTGCTTCAATCCTCAAGTGAAGAGAATAATG GACCTGTCTTTCCTTGGTAGAGGAATATGAAACCTCTGAGTAAATGAGAGTGATTCAAGACATTTTGCTTTTTTATTCGT TTCCTTTGCAATGTATCATGCTTGCATTATGTTGTGAGAATTTCTTTTTCACGAATTGTAATCCATTTTTTCTGTTGATA TATGCCTTTTCATTTAGATATTGACATGAAAGTTTCATGTAATTTCATTCCTTTCATAACGTTTCCTTTCTTTCTTTTTT CTTCTAAATTGCCTCTGCTTCCATCAAGGGTACCAATGCCTTGGTAACAATAAAAATGAATTGCATCGCCCTCCTTTTCA GATTACACCAGTTCATGACTGATATTTGGATAGTTAGTATCATGTGATGGAGCAAGAAAAATAAGAGGCAATTGATTCCC TCTTGAAATAAAGAAAATCAGTTCGATTTTCATGTTATATTTTTCATATCACTTGTAGAGGGTGGACAATTAGCTAGAAC GTAGCAGG
CDS sequence (LotjaGi6g1v0150300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTGATCAAGTAGTGTCCTTGGCTCGTGAGCAATTGCTCCCACTGGCTCGTGATCATCTGCTTCCAGTGTTAAAGGA AGCAGCCAACATGATCAGGGGTGTTCCAAAAGGAGTAGCAGAAATGAAAGGTGACCTTGAAAGCATTGAAGACTTCATCA ATGATGCAGTTCGAATGGCTGAGGCTGAAGAAGACCACACGCGTGATGGGATCAAAACAAGGGTGAAGCAGCTCAGAGAA GCATCTTTTCTCATAGAAGATGTCATTGATGAATACTCCATCTGTGAGGGGCATCGGCCTCGGGATCCCGGGTGTGCTAC AATCCCCCGTGACACCGCTGGCTTCATCAAAACCATGATGCTTCGCCTTCAGATAGCCTACAAGATTCAGAACATCAAAT CAGAAGTTGATGGAATGGTGAAAGGAAGTGATAAAAGTGGCATTCAAATCCAAATTTCTTCAGAACAAGGACAGAACAGT TCTTCAGGAATTCAAAATCTCACATTGAACAACCTTCAACCGGATCCATTGAAAGATGAAGCTGAAGTTGTCGGCTTTGA AGCTCCAAGAGATGAATTGATTCGTTGGTTGGTGGAGGGAGAAGAAGCAAAGCGCACAGTCATCTCTGTGGTGGGACAGG GAGGTCAGGGGAAAACCACTCTTGCTAAGAAAGTCTATGACACTAAAGAGGTCATTGAGCACTTCCGTTGCCACGCGACG ATCACGGTGTCCAAGTCCTACAATGTAGATAGCTTGTTGAGAGACATGTTGCAGCAGTTTTGCAATGAAAGCAACAAGGA TCCTCCTCAGGCAATGGAAGGAGAGCCGTTGAGAGCTGAAGTGACAAAGCACTTGCAGGATAAGAGGTATCTCATCTTGT TTGATAATGTTTGGGACATAAATTTCTGGAAGGTGATTGAATATGCTTTGAAAGATAATAAGAAAGGAAGTAGGATATTA ATCACAACCAGGAATATGGATGTTGCTATGTCATGCAAGAGATCTTCTCTTGTTCTAGTGCATCAGCTGCAACCTTTAAG TCGAATAAAATCTTTGGAGCTGTTCTATAAGAAGGCGTTCTTTGAATTTGATGGAGATTGTCCCAAAAATCTTTTGGATG TATCTGCTAAAATTGTTGAAAAATGTGATGATTTACCTCTAGCAATTGTGGCCATTGGCGGTCTTTTATCTGGTAAAGAT AGAGATCCATTTCAATGGGAAAGGTTTAATGAAACTCTAAGTTTCGAGTTGGAGAAGAATCCTGATTTGTCTGTTATAAC AAAGATTTTAGGCTTGAGTTATCATGATTTACCTTACTACCTCAAATGGTGCTTCTTGTACTTTGGGATATATCCTGAAG ACTACGAAATCAAAGCTGATAGACTGATTAGGCAGTGGGTAGCTGAAGGGTTTGTCAAAGATGAAAAGGTGAAAACAGTG GAGGAAACTGCAGAAACATATTTAACGGACTTGATTCACAGAAGCCTGGTTCAAGTGACTTCATTAGCTAGTGATGGAAA AACTAGAAGTTGTCGTGTTCATGACCTGGTACGACAAATGATCCTTGATAAAATTCAAGATCTAAGTTTTTGCCATTTCC CTAGTAGTGAAAATGAGAAGAAACCAGTCTTTGATGGAATGGTTCGTCGCCTCACAATAGCATCCAGTTGCAACAATGGG ATGGGAAGTGTTGAAACCTCAAACATTCGGTCACTGCATATTTTCAAAAATGAAGAACTACCAGATTCCTATGTGACAAG TATCCCTTCAAGGCACAGGTTACTAAAAGTGCTTGATCTTGAAGATGTTTCCCTGTATCATCAAGTTCCTAAAAATTTGG GGGACTTGTTCCTCTTGAGGTATTTAAGCTTCAGAAATACAAAGGTAGAAAATCTTCCAGGATCCATTGGTATGCTCCTC AACCTAGAGACCTTGGATCTAAGGCAAACGCTGGTGCGCGAGTTGCCAAGAGAGATTAACATGCTTACAAAGCTAAGACA CCTTCTAGCATATGATATCTCCAAGGGAGTTGGGTATGGGATTCAACTAAAAAATGGCATTGGGGACATAGAATCCTTAC AAACTCTACGTGAAGTCGAAGCGGATCACGGTGGGATTGAGCTGATAAAAGAGCTTGAAAGGCTTACAGAGTTAAGAATG CTGGGGTTGACCAATGTGAAGGGAGAATACACAAGTGCTCTATGTTCCTCAATAAATAATAAGCAACACTTGGAGAAACT ATATATTACTGCAGTTAATGGAAAAGAGGTCATTGATTTGCATCATCATGTATCTGCACCTCGACTTAGGAAGCTTCGCC TTACTGGGAGGTTAAACAATTTCCCACACTGGGTTCGAAATCTCAACTTACTTGTTAAGTTGTCCTTGTCACACTCCATG TTAACTCATGATCCCTTGGAATCACTGAAAGATCTGACAAATTTGCAGTACCTCAGCATCCTGTACCATGCATATGATGG TGAAACTTTGCATTTTCCAGATGGGGGGTTTCGGAGCCTGAAGCAGTTAGTACTCAGGCGCTTGTATAATTTGAATTCTA TCAGTATCGGTGAAGGAGCACTGTGTTCACTGGAGAGGTTAAAGTTGGTGAATATATCCGAACTCTATGAGGTGCCTTCT GATGTCTATGACTTAAAAAAGCTTCAAGTTTTCCACATTGTGAACATGCCAGAGTTTGAGCAGAACATTGATCGCGATAT AGGAAAGTTCCAATGGATCATAGAGCAGGTGCCCTTTGTGAGCATTGCTGAACGAACTTGGGCATGA
Protein sequence (LotjaGi6g1v0150300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCDQVVSLAREQLLPLARDHLLPVLKEAANMIRGVPKGVAEMKGDLESIEDFINDAVRMAEAEEDHTRDGIKTRVKQLRE ASFLIEDVIDEYSICEGHRPRDPGCATIPRDTAGFIKTMMLRLQIAYKIQNIKSEVDGMVKGSDKSGIQIQISSEQGQNS SSGIQNLTLNNLQPDPLKDEAEVVGFEAPRDELIRWLVEGEEAKRTVISVVGQGGQGKTTLAKKVYDTKEVIEHFRCHAT ITVSKSYNVDSLLRDMLQQFCNESNKDPPQAMEGEPLRAEVTKHLQDKRYLILFDNVWDINFWKVIEYALKDNKKGSRIL ITTRNMDVAMSCKRSSLVLVHQLQPLSRIKSLELFYKKAFFEFDGDCPKNLLDVSAKIVEKCDDLPLAIVAIGGLLSGKD RDPFQWERFNETLSFELEKNPDLSVITKILGLSYHDLPYYLKWCFLYFGIYPEDYEIKADRLIRQWVAEGFVKDEKVKTV EETAETYLTDLIHRSLVQVTSLASDGKTRSCRVHDLVRQMILDKIQDLSFCHFPSSENEKKPVFDGMVRRLTIASSCNNG MGSVETSNIRSLHIFKNEELPDSYVTSIPSRHRLLKVLDLEDVSLYHQVPKNLGDLFLLRYLSFRNTKVENLPGSIGMLL NLETLDLRQTLVRELPREINMLTKLRHLLAYDISKGVGYGIQLKNGIGDIESLQTLREVEADHGGIELIKELERLTELRM LGLTNVKGEYTSALCSSINNKQHLEKLYITAVNGKEVIDLHHHVSAPRLRKLRLTGRLNNFPHWVRNLNLLVKLSLSHSM LTHDPLESLKDLTNLQYLSILYHAYDGETLHFPDGGFRSLKQLVLRRLYNLNSISIGEGALCSLERLKLVNISELYEVPS DVYDLKKLQVFHIVNMPEFEQNIDRDIGKFQWIIEQVPFVSIAERTWA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 19 | 101 | 83 | 3.4E-12 | ||
| CDD | 19 | 137 | 119 | 4.04965E-15 | ||
| PANTHER | 26 | 848 | 823 | 5.1E-149 | – | |
| PANTHER | 26 | 848 | 823 | 5.1E-149 | – | |
| Gene3D | 167 | 339 | 173 | 4.8E-35 | – | |
| SUPERFAMILY | 172 | 448 | 277 | 3.69E-64 | ||
| Pfam | 189 | 435 | 247 | 1.6E-51 | ||
| PRINTS | 207 | 222 | 16 | 5.1E-13 | – | |
| PRINTS | 284 | 298 | 15 | 5.1E-13 | – | |
| PRINTS | 382 | 396 | 15 | 5.1E-13 | – | |
| SUPERFAMILY | 512 | 909 | 398 | 3.74E-38 | – | |
| Gene3D | 559 | 915 | 357 | 3.1E-37 | ||
| PRINTS | 786 | 802 | 17 | 5.1E-13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi6g1v0150300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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