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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0150800 |
| Transcript ID | LotjaGi6g1v0150800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein; TAIR: AT3G07040.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q39214|RPM1_ARATH Disease resistance protein RPM1; TrEMBL-Plants: tr|K7L9X5|K7L9X5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0150800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:42693832..42696347) extracted from Lotus japonicus Gifu genome v1.2.
AGAGCGCACTGTCGTCTCTGTTGTGGCAATGGGAGGGCAGGGGAAAACCACTCTTGCCAAGAAAGTTTTTGACAACCGGA AGGTGATAGACCACTTTGATTGTCATGCTTGGATCACAGTATCTCAATCCTACTCCATAGAAGGGATGCTAAGAGACATG TTGCAGAAGTTTTACAAGGAGACTAAAAAGACTCTTCCTGATGGTATTTCTACAATGGATCGAATGTCATTGATTGATGA GCTCAGGAACTGCTTGCAGCAAAATAGGTACGTTATTGTGTTTGATGATGTGTGGAACGTACGTTTTTGGGATGAGATTC AATTTTCTTTGGTTGATAATAAAAATGGAAGTAGGATATTAATGACTACAAGGAACATGGATGTTGCGGTGTCTTGTAGA ATCTCTTCTCCTTTTGTTGAAGTGCATGAGTTGCAACCTTTAACTCTTGACCAATCTTTAGTGTTGTTCTATAAGAAGGC ATTCCAATTTGACTTTGATGGGCATTGTCCAGAAGATCTCATTGATATATCTCGCGTCATTGTTAAAAAATGCAATGGAT TACCACTAGCAATTGTGGCCATTGGTGGTGTTTTATCTGGCAGAAAAAAAAATGCACTTGAGTGGGAAAAGTTTTGTCAA AATCTAAGTGCAGAGCTCGAGAAAAATCTCCATTTAGATCATATAACGAAGATTTTAGGTTTCAGTTATGATGATTTGCC TTACCATCTTAAACCTTGCTTCCTGTATTTTGGAATGTATCCTGAAGATTATGAAGTCTGTTCGAGAAGATTGATTATGC AGTGGATAGCAGAAGGGTTTGTTAAGGTGGAAAGGGGGCGAATTTTGGAGAAAGTTGGAAAACAATATTTAAGAGAGTTG GTTCATAGAAGTTTGGTGTTAGTATCAAGTCGCTACCATAATGGAGTTAAAGTAAAATATTATCGGGTTCATGACGTATT GCGGGAGATGATCCTTACAAAATTTAAGGATTTAAGCTTTGGTCAGTTCATCGGTGAAGGTGATGAGTCAATGCCAGTCT CAAGCCGACGCCTATCACTAGCAACTAATTCTGAAATTTTAATGAGAGGTGATAAAATGAGTTCACAGTTTCGGTCATTG CATATTTTCACAAGGAACTTAGATGAAGATATTTTGTGTAGAATCCGTCAAGATTACACGCTATTGAAGGTACTTGATGC TGAGGATTTCAATTGGTACTCTGTTCCTATTAACATAGGGAATTTGGTCCACTTGAAGTATTTAAGTCTCCGTTCAGATT ATAGTTATCTCATGTCCATCAGTAAGTTCCAGAACCTAGAGACCTTGAATATATGGGGAGTAAATTTGCATCTGATGCCA AAGGAGCTTAGCAAGCTCCAAAGACTAAGACACCTTGTCGGCAACAGAATCTCTTTAACTCAATTGAAGGATGACATTGG AGGCTTGATATCTCTCCAAACGCTAGAGCGTGTGGAAGTAGATGATAATGAGATAAAGATAATTAGAGAGCTTGGAAAGC TTAAGCAGTTAAGAGTGTGTGGATTGGCCATTAAGGGGAAACATGTGGAAAGTACTCTATGCTCCTCATTAAATGAGATG CAGCACTTGGAGAAACTTTCTCTTTATACAATAGGGAAGGACCTTGATTTGAACTTCATTTCTCCTCTACCTATGTTTCA GAAACTTCTACTCAAAGGGTGGTTACATGTATTTCCAGAGTGGGTTCCACATCTCCCAAATCTTGTCAAATTGACCTTGA AAGAGTCCAGGTTAATGGATGATCCATTGAAATCACTACAAAATATGCCAAAATTGTCATCTCTCACACTCTATGATTGT TATAAAGGTCAAAGTTTGCATTTTGAAGGTGGAGGGTTTCAGAAACTAGAGGAACTGCACCTTGAAGGCTTGTATAACTT GAAATCCATCCTTATCGATAAAGGAGCACTGCCTTCTCTTAAAAAGCTTTCGGTATGGAATATGCCTAATCGTAAACTCA AGATTCTACTACCCCCTGGCATCCATCGCTTAGAGACAATTGTAGTGGTCAACATTGAAAATGCATCATTTGAATTCCTT CGCGAAGAACTTTCTTGATGCAATCAGGCATCCATGAAGGGGAAAATTGTTTAGCACCAAAATTAATGGACATTGAACAG CATCCAATTTCAAGGCGAAAAAACCAGGTGCATATTTCTTTCTGAAAGAATTTGAAAAGAAATGAAACATAAAAATAATC AGTTATTGTTTGGAATCATCAACCATTATTTACCTGTAATTTTTTCATCAACCAACAATCTCACCAATGCTACTAACTAC TAAGTACTAACATTGTGCTCTGAATTGCTAGGTGTTGGGCTAATTTGAACTCTCCATGTGGTCCTTCTAAAAAATGGCAT TGTATTTGTCTGTTGTTGCTGCTCTAGCACTTAAGTTGACGAATAAAGAGAATATGTACAAATTTGTTGTTAGTCTTATA AAAATATGTTAAGCCTACTGCATAAATGAGTGATTC
CDS sequence (LotjaGi6g1v0150800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGGGCAGGGGAAAACCACTCTTGCCAAGAAAGTTTTTGACAACCGGAAGGTGATAGACCACTTTGATTGTCATGC TTGGATCACAGTATCTCAATCCTACTCCATAGAAGGGATGCTAAGAGACATGTTGCAGAAGTTTTACAAGGAGACTAAAA AGACTCTTCCTGATGGTATTTCTACAATGGATCGAATGTCATTGATTGATGAGCTCAGGAACTGCTTGCAGCAAAATAGG TACGTTATTGTGTTTGATGATGTGTGGAACGTACGTTTTTGGGATGAGATTCAATTTTCTTTGGTTGATAATAAAAATGG AAGTAGGATATTAATGACTACAAGGAACATGGATGTTGCGGTGTCTTGTAGAATCTCTTCTCCTTTTGTTGAAGTGCATG AGTTGCAACCTTTAACTCTTGACCAATCTTTAGTGTTGTTCTATAAGAAGGCATTCCAATTTGACTTTGATGGGCATTGT CCAGAAGATCTCATTGATATATCTCGCGTCATTGTTAAAAAATGCAATGGATTACCACTAGCAATTGTGGCCATTGGTGG TGTTTTATCTGGCAGAAAAAAAAATGCACTTGAGTGGGAAAAGTTTTGTCAAAATCTAAGTGCAGAGCTCGAGAAAAATC TCCATTTAGATCATATAACGAAGATTTTAGGTTTCAGTTATGATGATTTGCCTTACCATCTTAAACCTTGCTTCCTGTAT TTTGGAATGTATCCTGAAGATTATGAAGTCTGTTCGAGAAGATTGATTATGCAGTGGATAGCAGAAGGGTTTGTTAAGGT GGAAAGGGGGCGAATTTTGGAGAAAGTTGGAAAACAATATTTAAGAGAGTTGGTTCATAGAAGTTTGGTGTTAGTATCAA GTCGCTACCATAATGGAGTTAAAGTAAAATATTATCGGGTTCATGACGTATTGCGGGAGATGATCCTTACAAAATTTAAG GATTTAAGCTTTGGTCAGTTCATCGGTGAAGGTGATGAGTCAATGCCAGTCTCAAGCCGACGCCTATCACTAGCAACTAA TTCTGAAATTTTAATGAGAGGTGATAAAATGAGTTCACAGTTTCGGTCATTGCATATTTTCACAAGGAACTTAGATGAAG ATATTTTGTGTAGAATCCGTCAAGATTACACGCTATTGAAGGTACTTGATGCTGAGGATTTCAATTGGTACTCTGTTCCT ATTAACATAGGGAATTTGGTCCACTTGAAGTATTTAAGTCTCCGTTCAGATTATAGTTATCTCATGTCCATCAGTAAGTT CCAGAACCTAGAGACCTTGAATATATGGGGAGTAAATTTGCATCTGATGCCAAAGGAGCTTAGCAAGCTCCAAAGACTAA GACACCTTGTCGGCAACAGAATCTCTTTAACTCAATTGAAGGATGACATTGGAGGCTTGATATCTCTCCAAACGCTAGAG CGTGTGGAAGTAGATGATAATGAGATAAAGATAATTAGAGAGCTTGGAAAGCTTAAGCAGTTAAGAGTGTGTGGATTGGC CATTAAGGGGAAACATGTGGAAAGTACTCTATGCTCCTCATTAAATGAGATGCAGCACTTGGAGAAACTTTCTCTTTATA CAATAGGGAAGGACCTTGATTTGAACTTCATTTCTCCTCTACCTATGTTTCAGAAACTTCTACTCAAAGGGTGGTTACAT GTATTTCCAGAGTGGGTTCCACATCTCCCAAATCTTGTCAAATTGACCTTGAAAGAGTCCAGGTTAATGGATGATCCATT GAAATCACTACAAAATATGCCAAAATTGTCATCTCTCACACTCTATGATTGTTATAAAGGTCAAAGTTTGCATTTTGAAG GTGGAGGGTTTCAGAAACTAGAGGAACTGCACCTTGAAGGCTTGTATAACTTGAAATCCATCCTTATCGATAAAGGAGCA CTGCCTTCTCTTAAAAAGCTTTCGGTATGGAATATGCCTAATCGTAAACTCAAGATTCTACTACCCCCTGGCATCCATCG CTTAGAGACAATTGTAGTGGTCAACATTGAAAATGCATCATTTGAATTCCTTCGCGAAGAACTTTCTTGA
Protein sequence (LotjaGi6g1v0150800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGQGKTTLAKKVFDNRKVIDHFDCHAWITVSQSYSIEGMLRDMLQKFYKETKKTLPDGISTMDRMSLIDELRNCLQQNR YVIVFDDVWNVRFWDEIQFSLVDNKNGSRILMTTRNMDVAVSCRISSPFVEVHELQPLTLDQSLVLFYKKAFQFDFDGHC PEDLIDISRVIVKKCNGLPLAIVAIGGVLSGRKKNALEWEKFCQNLSAELEKNLHLDHITKILGFSYDDLPYHLKPCFLY FGMYPEDYEVCSRRLIMQWIAEGFVKVERGRILEKVGKQYLRELVHRSLVLVSSRYHNGVKVKYYRVHDVLREMILTKFK DLSFGQFIGEGDESMPVSSRRLSLATNSEILMRGDKMSSQFRSLHIFTRNLDEDILCRIRQDYTLLKVLDAEDFNWYSVP INIGNLVHLKYLSLRSDYSYLMSISKFQNLETLNIWGVNLHLMPKELSKLQRLRHLVGNRISLTQLKDDIGGLISLQTLE RVEVDDNEIKIIRELGKLKQLRVCGLAIKGKHVESTLCSSLNEMQHLEKLSLYTIGKDLDLNFISPLPMFQKLLLKGWLH VFPEWVPHLPNLVKLTLKESRLMDDPLKSLQNMPKLSSLTLYDCYKGQSLHFEGGGFQKLEELHLEGLYNLKSILIDKGA LPSLKKLSVWNMPNRKLKILLPPGIHRLETIVVVNIENASFEFLREELS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 660 | 660 | 3.2E-131 | – | |
| SUPERFAMILY | 1 | 241 | 241 | 1.77E-61 | ||
| Gene3D | 1 | 131 | 131 | 6.2E-33 | – | |
| Pfam | 1 | 229 | 229 | 1.5E-51 | ||
| PANTHER | 1 | 660 | 660 | 3.2E-131 | – | |
| PRINTS | 75 | 89 | 15 | 1.2E-7 | – | |
| Gene3D | 156 | 230 | 75 | 6.6E-6 | – | |
| PRINTS | 175 | 189 | 15 | 1.2E-7 | – | |
| SUPERFAMILY | 306 | 678 | 373 | 4.42E-34 | – | |
| Gene3D | 350 | 689 | 340 | 1.6E-36 | ||
| PRINTS | 567 | 583 | 17 | 1.2E-7 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi6g1v0150800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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