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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0166200 |
| Transcript ID | LotjaGi6g1v0166200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Major facilitator superfamily protein; TAIR: AT5G54860.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q8RWQ5|FBT4_ARATH Probable folate-biopterin transporter 4; TrEMBL-Plants: tr|I1KY57|I1KY57_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0166200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:45021287..45025471) extracted from Lotus japonicus Gifu genome v1.2.
CTGACAGGGACAAAACCGTCAAAAATCTAATAACTTCCACATTGTCGAAACCGTTGGGAGGGAAACTCGAAACTGTTCTC TGTTGTGACCATACTCCTTCTCCAAAACCAACAATGGAATCAGCAACTTCATAGTCAGAACAAAGTGACAGACAGAGAGT AATAGAAACAGAAGGGTTTTGAAATCTCTGTGTTTTTGTTTTGTTTTGTTTTATCGACAATGATCGAATGGACGAAGCGA TTGAACGCTGCATTTGGGGCTTCATTTCTTTGGCTGATTTGCTTGGTTTACTTCACCCAGGTTTCAATTCTTCACATTTT CTTCATTTTCATGTGGGTTTTTGTTTTCCTTCGAGATCTGATAGTTTCTTATTGGTTTTGTCAAATTAGGTGTTGAATGT TGTTGATCAATTCATGGTCCTTTTTTATACATAAATGTTTTATGTATTTTTCAGCTGTTATTAGATTGTTTTTGTGGCAT GCTGAATTGATAATCATGGTTATGCCTTCATTGACTCAATTACTCTGTTAATGCAGGGTTTTAGGTCCTTTGTCTGGACA TCAATTTCCTACCAGCTTAAGGATAATCTTAAGTTGTCACCTTCAGCTTCCCAATTTGTGATTTCAGTAGCATTTTTTCC ATGGAGCATCAAACCATTATATGGGTATGGATAATTGAATTGAATTGATTTTTTATTCTTTTTGCAATTGAGTGTCCACA CATATAAACACTTCCATACATGCATATAAAACTAACATATCTTAATGTAGATATGTGATTGTAGATTTGCAAACTATATG AATATGAATAATTTTTTTATTGTGATTATGGTCTATGATTTTGTTTATTAGTTTAAAACATGAGAGTGGCAATGATTCTA TGGTCTGTTGTTAGTTTTCTTGACACCTACCGAGAATATATAACATATTATGATTCTATTATGTTCAATGCTTATGTTTC TAAGCTGCATAAACATAAATTTTAGTAATGCTTATGAATATCTTCCGAACCTACTGAACTGTGTTAACAATTGGAAGCTT CAGCATTTTTGTGGGTTTTGTGTATATTTGTATCTGTCTGTTTACTACAATTTCACACTACTTCATTGCAATCTGATTTG ATTATTGATGAGCAGAATAATTTCTGATTGTATCCCAATCAAAGGAAGAAAACGGGTTCCCTACTTAGTGATTGCAACTG TGCTCTCCCTTGTGCCATGGTTGATTTTAGGCTTAAATTCAACATTGAGGGATTCAACAGGGCACCTAATGGTATTTTTG ACTGTGCAAAACTTGGGCTCGGCCATGGCAGATGTTGTTGTTGACGCAATGATAGCGGAGGCAGTAAGAGATGACAAGTA AGTTTGCATCTTCAGTTCCTTATATTCATATTCTGCTGACAAAACCCTGCATATAGATATTTTTAATAATGCAAAAGTTT GGGATCTTATATTGGAATAATAATTAAGAAAATCTGAAGAAAAATGCAGAAACACTAAACGTTGCAATTGTAGTTGCAGT TTATGAGCTTTTGTACATTTGCTCTATCTTCACAACAAAAGTAAAAGTTGAATTCAAATAATGGGATCCAGTGGCATACA TGTTAGTGCTTGATAGTTGAAAAAGAGAAGGTAAGAAATTTTAAGAAAGGATGGGAAATGGAGTTGAGAGAGAGTAGCAT GACTCGTAAATAACAATAAAAGTTTGTTCTGTTATTTTTGCGTTTTCCAAGTTTAACATTTTGTGAGACTCATTTACTAA TTCCATGCACCTTGTTCTGGCTCGAATTTACAAGACTTCGTAAGATAATATTTTGTTTTAATGTGATTCTTACATGCCAC CCTTCTCACTAGATGAATAAGTTCAATTCAATTTGTTCTTTTTGTAATAACGGACTTTCAATCTCTCAATAGAATGGACT AATGAAGGTAGTTTTCAAGACGAAAACTGGATGGGTTAACTTTTCAACTTTTGTTGATAACCCTTGTAACTTAGACTTAT TTCAGCTATTATATCCACATATAAGGTTTGGCCTGGATAAAATTAACCTTACTGAATCTTCTATGATGGATATCTTTCTT GGCATTAGCTAATGGCTATATGTTGCATTGGTGTCTAACATTTGTCTCAGACCCTGGACCCTGTATGTAGTTCATGCTAT CTTTTGCAGAATGCTTTTTCTTATACTCTCGGATTAAGTACTGCCTTTTGTTGGTCAGGGCTTCATATGCAGGCGACCTC CAATCAATATCTTGGTCTGCAATGGCTTTGGGAGGGATATGTGGGAGTTTGTCAGGGGGGTTTGCATTATCCAATTTACG GATGGATGCTATTTTTCTTCTATTTTCTGTGCTGCCTTGCATGCAGTTGTTATCATGCTGGTTTGTGGAGGAGAGCTCTG TAAATAGCAAAGTTTTACCAGAGGATTCTATTGATTCACATACGAATGATAGTAGTAGTATCCCAGATGAAGATAGTCCT TTAACCAAAAAGTCCCACAAGAGTACAAGAAGAAGAAAGAACGGCAAAAAGAACAAGAAAAATAAAGCAGTAAATACCAG CAAACCCAAAAAATTTGAGAAAGGAGATTCCATGGCATTAAAGTGGTTCCATTCTTTGAAAGATGCAATTTATGATTTGT GCCGTGCGTTTAAACAGCCAACGATTTGGAGGTAACTAAAGTAGTCTTTAAAGATTTTCTATTCTGTGTATATTTTCAAT GACAGAGTGTAGCTTATTCACTTAATGCGCTCATATGCTATAAACTGTTATTAACAATCTTTCTTTGGGATGGCAGACCT ATGACTTGGTTTTTCCTTGCCCACATTACTCTTCCCGATCTTTCAACAGTCATTTTCTACTATGAAACCGAGGTTCTGAA GCTGGAAGCGTCTTTTCTCGGGACTGCCCGGGTTGTTGGGTGGTCAGGACTTATGCTGGGCACCTTTATTTATAATCGCC ACCTGAAGTATATGACCCTAAGAAAAATTCTCATGTAAGCAATTAAAGAATATTTTTCATTAGTGTCTGTGTATGGTTAA CTTGTGCATGTTCAATTTACTGATATGTTCTCATCATGATTTCAGGTGTGCCCATATTGGGTTGGTCTTCTTGAATCTTC TGCAGATGGCTGTAGTGTCTAGGAAAAATATTGCCTTTGGAGTATCTGACAGGGTTATGGTGCTCTTTAGCTCGGCTCTT GCTTTTGGAGTCAATCAATTCAAGTTTGTCATTACTTCTCTCTTCAGTTTCTGTTATTTACTAAGTATTTTTAATTAAAG ATGTGCATGGCAAGATAGGTGAAAACATTTCCAAGAAAAACATAAATGTTTTCAAGTAAAGTTTGTTACTTTATCGAATT TCCGTGCCATCTTCATCTCAAAATAGAGATGAAAAACATTTGATATTGATGGCATGTACTTCATTTTCATTACATAGTAA TCTTTTGCATTCCATTAAATTTTGGTGTGCCATTGGCACCTACATTTGTGCTTTTGAGCTTTTGTTTCTGGAAACACAAT GATTTGAACCACTTTTTATATTTACATCCTAAGTTCCTATTCTTTAGCTGATTATTATTTTGTATTTTGGGAAAAACTGC AGGTTTATGCCTTTCCTGATCTTATCTGGACAACTATGTCCTCCTGGGATTGAAGGGACTTTATTTGCCCTTTTCATGTC AATAAACAATTTGGGGTCAACAGTGGGGTCTTTTGTGGGTGCTGGCTTGGCTTCTATATTGAACATTGATTCAGGATCAT TTGACAATCTTCTATTGGGCATCACCATTCAAACCTTGTGCTATTGCATTCCAGTTGCTTTTCTGTTTCTGATACCAAAA GAAGCTACAGGTGTAGCAGCATAGGTTACGAGTTAATGACTACAATTGAGATTGACTTCAGTTACATTAGTTTTTTCTAG GTCCATCACAGCTGGTATTTTACACTTGTAAACGGGAAATGAGGATTATATAAATCTGGTTTATACAATTCTCTTTTGAT AATCACAAAATTATTATACTGATTGTATATACTCTTGTAGCAACAATTTTGGTCAGCAAGTCACTTTTTACACATCATTA TCTTCAAAATTGGTTTTAACTTCTAAGTGAATTTAGATTTGGTTAATCATTTATCAAAACGCCGTTGCGCATCTGAATGC AATTTATGAAATTAAACTTCTTACT
CDS sequence (LotjaGi6g1v0166200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCGAATGGACGAAGCGATTGAACGCTGCATTTGGGGCTTCATTTCTTTGGCTGATTTGCTTGGTTTACTTCACCCA GGGTTTTAGGTCCTTTGTCTGGACATCAATTTCCTACCAGCTTAAGGATAATCTTAAGTTGTCACCTTCAGCTTCCCAAT TTGTGATTTCAGTAGCATTTTTTCCATGGAGCATCAAACCATTATATGGAATAATTTCTGATTGTATCCCAATCAAAGGA AGAAAACGGGTTCCCTACTTAGTGATTGCAACTGTGCTCTCCCTTGTGCCATGGTTGATTTTAGGCTTAAATTCAACATT GAGGGATTCAACAGGGCACCTAATGGTATTTTTGACTGTGCAAAACTTGGGCTCGGCCATGGCAGATGTTGTTGTTGACG CAATGATAGCGGAGGCAGTAAGAGATGACAAGGCTTCATATGCAGGCGACCTCCAATCAATATCTTGGTCTGCAATGGCT TTGGGAGGGATATGTGGGAGTTTGTCAGGGGGGTTTGCATTATCCAATTTACGGATGGATGCTATTTTTCTTCTATTTTC TGTGCTGCCTTGCATGCAGTTGTTATCATGCTGGTTTGTGGAGGAGAGCTCTGTAAATAGCAAAGTTTTACCAGAGGATT CTATTGATTCACATACGAATGATAGTAGTAGTATCCCAGATGAAGATAGTCCTTTAACCAAAAAGTCCCACAAGAGTACA AGAAGAAGAAAGAACGGCAAAAAGAACAAGAAAAATAAAGCAGTAAATACCAGCAAACCCAAAAAATTTGAGAAAGGAGA TTCCATGGCATTAAAGTGGTTCCATTCTTTGAAAGATGCAATTTATGATTTGTGCCGTGCGTTTAAACAGCCAACGATTT GGAGACCTATGACTTGGTTTTTCCTTGCCCACATTACTCTTCCCGATCTTTCAACAGTCATTTTCTACTATGAAACCGAG GTTCTGAAGCTGGAAGCGTCTTTTCTCGGGACTGCCCGGGTTGTTGGGTGGTCAGGACTTATGCTGGGCACCTTTATTTA TAATCGCCACCTGAAGTATATGACCCTAAGAAAAATTCTCATGTGTGCCCATATTGGGTTGGTCTTCTTGAATCTTCTGC AGATGGCTGTAGTGTCTAGGAAAAATATTGCCTTTGGAGTATCTGACAGGGTTATGGTGCTCTTTAGCTCGGCTCTTGCT TTTGGAGTCAATCAATTCAAGTTTATGCCTTTCCTGATCTTATCTGGACAACTATGTCCTCCTGGGATTGAAGGGACTTT ATTTGCCCTTTTCATGTCAATAAACAATTTGGGGTCAACAGTGGGGTCTTTTGTGGGTGCTGGCTTGGCTTCTATATTGA ACATTGATTCAGGATCATTTGACAATCTTCTATTGGGCATCACCATTCAAACCTTGTGCTATTGCATTCCAGTTGCTTTT CTGTTTCTGATACCAAAAGAAGCTACAGGTGTAGCAGCATAG
Protein sequence (LotjaGi6g1v0166200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIEWTKRLNAAFGASFLWLICLVYFTQGFRSFVWTSISYQLKDNLKLSPSASQFVISVAFFPWSIKPLYGIISDCIPIKG RKRVPYLVIATVLSLVPWLILGLNSTLRDSTGHLMVFLTVQNLGSAMADVVVDAMIAEAVRDDKASYAGDLQSISWSAMA LGGICGSLSGGFALSNLRMDAIFLLFSVLPCMQLLSCWFVEESSVNSKVLPEDSIDSHTNDSSSIPDEDSPLTKKSHKST RRRKNGKKNKKNKAVNTSKPKKFEKGDSMALKWFHSLKDAIYDLCRAFKQPTIWRPMTWFFLAHITLPDLSTVIFYYETE VLKLEASFLGTARVVGWSGLMLGTFIYNRHLKYMTLRKILMCAHIGLVFLNLLQMAVVSRKNIAFGVSDRVMVLFSSALA FGVNQFKFMPFLILSGQLCPPGIEGTLFALFMSINNLGSTVGSFVGAGLASILNIDSGSFDNLLLGITIQTLCYCIPVAF LFLIPKEATGVAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 4 | 492 | 489 | 3.6E-253 | ||
| PANTHER | 4 | 492 | 489 | 3.6E-253 | – | |
| TMHMM | 12 | 34 | 23 | - | – | |
| Phobius | 12 | 34 | 23 | - | – | |
| SUPERFAMILY | 14 | 487 | 474 | 7.72E-38 | ||
| TIGRFAM | 17 | 486 | 470 | 2.3E-75 | ||
| CDD | 18 | 482 | 465 | 1.25927E-127 | – | |
| Pfam | 27 | 487 | 461 | 9.3E-77 | ||
| Phobius | 35 | 53 | 19 | - | – | |
| TMHMM | 49 | 71 | 23 | - | – | |
| Phobius | 54 | 72 | 19 | - | – | |
| Phobius | 73 | 83 | 11 | - | – | |
| Phobius | 84 | 101 | 18 | - | – | |
| TMHMM | 84 | 106 | 23 | - | – | |
| Phobius | 102 | 112 | 11 | - | – | |
| Phobius | 113 | 132 | 20 | - | – | |
| Phobius | 133 | 152 | 20 | - | – | |
| TMHMM | 152 | 174 | 23 | - | – | |
| Phobius | 153 | 175 | 23 | - | – | |
| Phobius | 176 | 180 | 5 | - | – | |
| Phobius | 181 | 200 | 20 | - | – | |
| TMHMM | 181 | 200 | 20 | - | – | |
| Phobius | 201 | 298 | 98 | - | – | |
| MobiDBLite | 211 | 227 | 17 | - | – | |
| MobiDBLite | 211 | 261 | 51 | - | – | |
| MobiDBLite | 236 | 256 | 21 | - | – | |
| TMHMM | 298 | 317 | 20 | - | – | |
| Phobius | 299 | 317 | 19 | - | – | |
| Phobius | 318 | 328 | 11 | - | – | |
| TMHMM | 324 | 346 | 23 | - | – | |
| Phobius | 329 | 347 | 19 | - | – | |
| Phobius | 348 | 358 | 11 | - | – | |
| TMHMM | 356 | 378 | 23 | - | – | |
| Phobius | 359 | 379 | 21 | - | – | |
| Phobius | 380 | 390 | 11 | - | – | |
| TMHMM | 391 | 413 | 23 | - | – | |
| Phobius | 391 | 414 | 24 | - | – | |
| Phobius | 415 | 425 | 11 | - | – | |
| Phobius | 426 | 451 | 26 | - | – | |
| TMHMM | 428 | 450 | 23 | - | – | |
| Phobius | 452 | 462 | 11 | - | – | |
| Phobius | 463 | 484 | 22 | - | – | |
| TMHMM | 463 | 485 | 23 | - | – | |
| Phobius | 485 | 493 | 9 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi6g1v0166200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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