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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000120
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 30 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.328s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0213329.1
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] gi|356518808|ref|XP_003528069.1| chr0 107713973 107717068 +
2 domain predictions
1 GO term
Lj0g3v0244489.1
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula] gi|357441631|ref|XP_003591093.1| chr0 126856636 126860139 -
2 domain predictions
1 GO term
Lj0g3v0251929.1
n.a. PREDICTED: fatty acid amide hydrolase-like [Cicer arietinum] gi|502077377|ref|XP_004485635.1| chr0 130630773 130634190 -
2 domain predictions
1 GO term
Lj1g3v2126200.1
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] gi|356518808|ref|XP_003528069.1| chr1 25582901 25585006 -
2 domain predictions
1 GO term
Lj1g3v2126210.1
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] gi|356518808|ref|XP_003528069.1| chr1 25585144 25587608 -
2 domain predictions
1 GO term
Lj2g3v0661550.1
n.a. PREDICTED: translocon at the outer membrane of chloroplasts 64-like isoform X1 [Cicer arietinum] gi|502138058|ref|XP_004503273.1| chr2 10699445 10705324 -
2 domain predictions
1 GO term
Lj2g3v0674850.1
n.a. PREDICTED: translocon at the outer membrane of chloroplasts 64-like isoform X1 [Cicer arietinum] gi|502138058|ref|XP_004503273.1| chr2 10806748 10813566 -
2 domain predictions
1 GO term
Lj3g3v3500110.2
n.a. amidase [Cucumis melo subsp]. melo] gi|307136168|gb|ADN34009.1| chr3 42514386 42527615 -
2 domain predictions
1 GO term
Lj4g3v0341190.1
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] gi|356512046|ref|XP_003524732.1| chr4 4593527 4604643 +
2 domain predictions
1 GO term
Lj4g3v2603600.1
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula] gi|357520427|ref|XP_003630502.1| chr4 34824438 34827418 +
2 domain predictions
1 GO term
Lj4g3v2833050.1
n.a. PREDICTED: fatty acid amide hydrolase-like isoform X2 [Cicer arietinum] gi|502139767|ref|XP_004503894.1| chr4 37988407 37995108 +
2 domain predictions
1 GO term
Lj4g3v2860650.1
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula] gi|357520309|ref|XP_003630443.1| chr4 38338845 38343390 +
2 domain predictions
1 GO term
Lj4g3v2860650.2
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] gi|356512926|ref|XP_003525165.1| chr4 38340466 38343390 +
2 domain predictions
1 GO term
Lj4g3v3114860.1
n.a. PREDICTED: translocon at the outer membrane of chloroplasts 64-like isoform X1 [Cicer arietinum] gi|502138058|ref|XP_004503273.1| chr4 42155148 42161027 +
2 domain predictions
1 GO term
Lj5g3v1484550.1
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] gi|356576771|ref|XP_003556503.1| chr5 21616467 21620751 +
2 domain predictions
1 GO term
Lj5g3v1484550.2
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] gi|356576771|ref|XP_003556503.1| chr5 21616467 21620751 +
2 domain predictions
1 GO term
Lj6g3v0922040.1
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial-like isoform X1 [Cicer arietinum] gi|502128559|ref|XP_004500003.1| chr6 9573550 9578231 -
2 domain predictions
1 GO term
Lj6g3v1966870.1
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] gi|356525874|ref|XP_003531546.1| chr6 22685340 22686265 -
2 domain predictions
1 GO term
Lj6g3v2130130.1
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula] gi|357520427|ref|XP_003630502.1| chr6 24763002 24770625 +
2 domain predictions
1 GO term
Lj6g3v2182060.1
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] gi|356554842|ref|XP_003545751.1| chr6 25192025 25196247 -
2 domain predictions
1 GO term
Lj6g3v2218190.1
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] gi|356525874|ref|XP_003531546.1| chr6 25669908 25675635 -
2 domain predictions
1 GO term
Lj6g3v2218190.2
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] gi|356525874|ref|XP_003531546.1| chr6 25669908 25675635 -
2 domain predictions
1 GO term
LotjaGi1g1v0324600.1
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT5G64440.1 fatty acid amide hydrolase; Swiss-Prot: sp|Q7XJJ7|FAAH_ARATH Fatty acid amide hydrolase; TrEMBL-Plants: tr|G7J2M6|G7J2M6_MEDTR Fatty acid amide hydrolase-like protein; Found in the gene: LotjaGi1g1v0324600 LjG1.1_chr1 77686677 77692641 +
2 domain predictions
1 GO term
LotjaGi1g1v0421500.1
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT5G64440.1 fatty acid amide hydrolase; Swiss-Prot: sp|Q7XJJ7|FAAH_ARATH Fatty acid amide hydrolase; TrEMBL-Plants: tr|G7J2M6|G7J2M6_MEDTR Fatty acid amide hydrolase-like protein; Found in the gene: LotjaGi1g1v0421500 LjG1.1_chr1 91536189 91542151 -
2 domain predictions
1 GO term
LotjaGi4g1v0413100.1
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT5G64440.1 fatty acid amide hydrolase; Swiss-Prot: sp|Q7XJJ7|FAAH_ARATH Fatty acid amide hydrolase; TrEMBL-Plants: tr|A0A151R6Z3|A0A151R6Z3_CAJCA Glutamyl-tRNA(Gln) amidotransferase subunit A; Found in the gene: LotjaGi4g1v0413100 LjG1.1_chr4 78874587 78882527 +
2 domain predictions
1 GO term
LotjaGi4g1v0416700_LC.1
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A-like protein; TAIR: AT5G07360.1 Amidase family protein; Swiss-Prot: sp|Q1GYD3|GATA_METFK Glutamyl-tRNA(Gln) amidotransferase subunit A; TrEMBL-Plants: tr|A0A072TUX3|A0A072TUX3_MEDTR Glutamyl-tRNA(Gln) amidotransferase subunit A-like protein; Found in the gene: LotjaGi4g1v0416700_LC LjG1.1_chr4 79242519 79247261 +
2 domain predictions
1 GO term
LotjaGi4g1v0416700_LC.2
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A-like protein; TAIR: AT5G07360.1 Amidase family protein; Swiss-Prot: sp|Q55424|AMID_SYNY3 Putative amidase; TrEMBL-Plants: tr|G7LGJ1|G7LGJ1_MEDTR Glutamyl-tRNA(Gln) amidotransferase subunit A-like protein; Found in the gene: LotjaGi4g1v0416700_LC LjG1.1_chr4 79242526 79247261 +
2 domain predictions
1 GO term
LotjaGi4g1v0416700_LC.3
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A-like protein; TAIR: AT5G07360.1 Amidase family protein; Swiss-Prot: sp|A4G1L4|GATA_HERAR Glutamyl-tRNA(Gln) amidotransferase subunit A; TrEMBL-Plants: tr|A0A1J7GIC5|A0A1J7GIC5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0416700_LC LjG1.1_chr4 79242526 79247261 +
2 domain predictions
1 GO term
LotjaGi6g1v0171200.1
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT3G25660.1 Amidase family protein; Swiss-Prot: sp|Q9LI77|GATA_ARATH Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7IZY8|G7IZY8_MEDTR Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Found in the gene: LotjaGi6g1v0171200 LjG1.1_chr6 45794241 45799713 -
2 domain predictions
1 GO term
LotjaGi6g1v0347100.1
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT5G64440.1 fatty acid amide hydrolase; Swiss-Prot: sp|Q7XJJ7|FAAH_ARATH Fatty acid amide hydrolase; TrEMBL-Plants: tr|I1ME34|I1ME34_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0347100 LjG1.1_chr6 65983791 65992741 -
2 domain predictions
1 GO term