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LotjaGi6g1v0189500.2

Overview

Field Value
Gene ID LotjaGi6g1v0189500
Transcript ID LotjaGi6g1v0189500.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT1G14370.1 protein kinase 2A; Swiss-Prot: sp|O49839|PBL2_ARATH Probable serine/threonine-protein kinase PBL2; TrEMBL-Plants: tr|A0A072UVS1|A0A072UVS1_MEDTR Tyrosine kinase family protein; Found in the gene: LotjaGi6g1v0189500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:48510943..48513154) extracted from Lotus japonicus Gifu genome v1.2.

CTGATTTTTGGTTTCTGATGGTAAAATTTGTAGTTTTCTTAATTGGCACAACTATATGATATATTCTTTTTCATGTGTTT GATTACTTAAACCAAAAAATAAGAAAACTATTGCTGCATGATACTAAATCTCATGGTTGGTTTTAACTTGCCTACCATCT GTATGTAGGAAATAAGAGGCCACAAAGTAGGCCAAAGCAGCATTCAAATTCTCTTGAGCAAAAAGCTGCTATGCAAATTT CAGAAGCAAATGTTGAGAAATCCATCTCCAATAAACTTAAGTCATTCAGCTTCAATGATCTGAAGGAGGCCACCAAGAAC TTCCGGCAAGAAAACTTAATCGGAGAGGGAGGGTTTGGGCGTATCTTCAAGGGATGGATTGATCAGAACACATATGCTCC CACAAAACCAGGGAGTGGGATGGTAGTGGCCATTAAGAATCTTAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTG TAAGTGTAACAGGATTCATAAATCAAAGCCTTTTTTTTCCTCCTGGCTGATAGGGTTTGCTAGGTATTGACAAGTTATAC ATCCTTTCTTTTTGGCAGGCAGAAGTCAATTATCTTGGGCAGCTTCACCATGAAAATCTGGTGAAACTTATTGGTTATTG CTTACAAGGTAAAAACAGGCTTCTAGTATATGAATTCATGCCAAAAGGAAGCTTGGAGAATCATTTGTTCCGAAGTAAGT ACATTTCACACTATGCATGTTTGGTCCCTAAGTTCCCACTTCCTTTCCCTATCAATTTTTGACATTTGAGTAGCTTTTGT ACACCAAAGCAAGAGTATGATAAATCGACAAACACTTCTAAGAAAAGAAAACCTGAGATGATTTTACAAGAGCAGCAACT CACATAAGTTGAAATTACTGTATGCATCTCAACATTTTCAGAAAATCCCTATCTAACTTCTTCAGAAGCACCTAGACATA GAAGGCATTTTTAACTAGGCAGTAGATATCTAAAGACAAATCCTACAAGAACAGCTTTTGTTTATTTACCATGTTGTTGA ATTTAACTGATAAACTGATCCAGAGGATTACACAACATGAAATGGTTTTCATTTTTTTCTCACATATTGATTTAGGACTG AGCCATAACCATAACTGCTATTTACTTATATCTTAAATCTTTGTTTCTATTTATGCAGAAGGTGTTCAACCAATCCCTTG GACTACACGTGTTAACATTGCAATTGGCGTAGCAAGAGGCTTAGCATACTTACATTCCCTGAATGCAAATGTCATATTTC GTGATTTAAAGGCTTCCAATATCCTACTTGATTCAGTATGTAACTTTAAAAGTCTGGCTTGTGGATCTTTGATGACTACA TCCTATGTTTTACATGCAAGTTTCCATTCTGAAATAGTAGCCTAATGTACATGCAGGATTTCGGTCCGAGACTTTCAGAT TTTGGCTTGGCAAGGGATGGTCCTACCGGAGATAACACTCACGTTTCAACCAGAGTTATTGGAACTCAAGGTTATGCTGC ACCAGAGTATGTCGCTACAGGTATTGTCTTGATTAAAGTTTTAAGAATGGCCAATTCAACATTTTAGCACAACAACAAAA TTGTGACCTAAACGTCTAATTCAACATATAGTGTATGTTTGGAAACTCTTCTACAATTGATTCAGAAGTCAGAATCAATT ATGGGGAGAAGCTTTTGTGAGTAGCTTCTGAGTTTCAGAATTGATTCAGATGAAAGAGAAGCTGATCCTAACATGTTATC TGTGTGTGAGAGAGATAGATTTAACAAGACTATCTTTGACTCTTTCTAAATTGGCTTTCAATGGAACAGGTCATTTGACA CCAAGGAGTGATGTATACAGCTTCGGTGTTGTCTTGTTGGAGTTACTAACCGGAAGACGAGCACTAGAAGACGATAGACC TGGAGTTTCAGAGGAAACATTAGTGGATTGGGCAATGCCTTTTCTGAGTGATAGCAGAAGGGTTTTGAGAATCATGGACA CTAGGTTGGGGGGTCAATACTCAAAGAAAGGAGCACAAGCTGCAGCTTCACTTGCATTGCAATGCTTGAATACAGATCCA AAATTTAGACCACCTATGGTAGAGGTTCTGGCAACATTGGAAGGACTTCATTCCTTGAATTCAATCCCAAGGACACCAAA ATCTGGAATTGAAAGTCATACAAACAGGCATTTTGGTCATGCACAAAAGTAG
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0189500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCAAATTTCAGAAGCAAATGTTGAGAAATCCATCTCCAATAAACTTAAGTCATTCAGCTTCAATGATCTGAAGGAGGC CACCAAGAACTTCCGGCAAGAAAACTTAATCGGAGAGGGAGGGTTTGGGCGTATCTTCAAGGGATGGATTGATCAGAACA CATATGCTCCCACAAAACCAGGGAGTGGGATGGTAGTGGCCATTAAGAATCTTAAGCCAGAAAGCTTTCAAGGCCACAAG GAATGGCTTGCAGAAGTCAATTATCTTGGGCAGCTTCACCATGAAAATCTGGTGAAACTTATTGGTTATTGCTTACAAGG TAAAAACAGGCTTCTAGTATATGAATTCATGCCAAAAGGAAGCTTGGAGAATCATTTGTTCCGAAAAGGTGTTCAACCAA TCCCTTGGACTACACGTGTTAACATTGCAATTGGCGTAGCAAGAGGCTTAGCATACTTACATTCCCTGAATGCAAATGTC ATATTTCGTGATTTAAAGGCTTCCAATATCCTACTTGATTCAGATTTCGGTCCGAGACTTTCAGATTTTGGCTTGGCAAG GGATGGTCCTACCGGAGATAACACTCACGTTTCAACCAGAGTTATTGGAACTCAAGGTTATGCTGCACCAGAGTATGTCG CTACAGGTCATTTGACACCAAGGAGTGATGTATACAGCTTCGGTGTTGTCTTGTTGGAGTTACTAACCGGAAGACGAGCA CTAGAAGACGATAGACCTGGAGTTTCAGAGGAAACATTAGTGGATTGGGCAATGCCTTTTCTGAGTGATAGCAGAAGGGT TTTGAGAATCATGGACACTAGGTTGGGGGGTCAATACTCAAAGAAAGGAGCACAAGCTGCAGCTTCACTTGCATTGCAAT GCTTGAATACAGATCCAAAATTTAGACCACCTATGGTAGAGGTTCTGGCAACATTGGAAGGACTTCATTCCTTGAATTCA ATCCCAAGGACACCAAAATCTGGAATTGAAAGTCATACAAACAGGCATTTTGGTCATGCACAAAAGTAG
Download CDS Sequence

Protein sequence (LotjaGi6g1v0189500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MQISEANVEKSISNKLKSFSFNDLKEATKNFRQENLIGEGGFGRIFKGWIDQNTYAPTKPGSGMVVAIKNLKPESFQGHK EWLAEVNYLGQLHHENLVKLIGYCLQGKNRLLVYEFMPKGSLENHLFRKGVQPIPWTTRVNIAIGVARGLAYLHSLNANV IFRDLKASNILLDSDFGPRLSDFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRA LEDDRPGVSEETLVDWAMPFLSDSRRVLRIMDTRLGGQYSKKGAQAAASLALQCLNTDPKFRPPMVEVLATLEGLHSLNS IPRTPKSGIESHTNRHFGHAQK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45621
2 339 338 1.4E-213 –
PANTHER
PTHR45621:SF99
2 339 338 1.4E-213 –
Gene3D
G3DSA:3.30.200.20
5 116 112 1.1E-34 –
SUPERFAMILY
SSF56112
8 318 311 3.29E-80
IPR011009
PIRSF
PIRSF000615
29 138 110 2.0E-5 –
SMART
SM00220
31 319 289 1.7E-41
IPR000719
ProSiteProfiles
PS50011
31 319 289 39.608
IPR000719
Pfam
PF07714
33 311 279 2.7E-47
IPR001245
CDD
cd14066
37 315 279 9.27277E-95 –
ProSitePatterns
PS00107
37 69 33 -
IPR017441
Gene3D
G3DSA:1.10.510.10
117 327 211 2.1E-60 –
PIRSF
PIRSF000615
132 238 107 1.0E-11 –
PIRSF
PIRSF000615
280 336 57 200.0 –
MobiDBLite
mobidb-lite
320 342 23 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0189500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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