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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0193100 |
| Transcript ID | LotjaGi6g1v0193100.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-glucosidase; TAIR: AT5G20950.3 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|G7J6L9|G7J6L9_MEDTR Glycoside hydrolase family 3 protein; Found in the gene: LotjaGi6g1v0193100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:48922756..48926891) extracted from Lotus japonicus Gifu genome v1.2.
TGGGGTTTTGAAATTTCTGCAGATTGCTTGTGGATTTGTGTGCTGAGCCCTTGAAATGGGGAGATCTTTGATTCACATTG CGGGTGGTGTTCTGCTGCTACTGTGCTTGCTGGTTTCATTTTCTGAAGCAGCTGAATACTTGAAGTACAAAGACCCTAAG GTTGCTCTGAATAGAAGAATCAAAGATTTGATGAAAAGGATGACTCTAGAGGAAAAGATTGGTCAAATGACACAGGTTGA AAGGAGTGTTGCTACTCCTGATGCCATGAAGAAGTACTTCATTGGTAAGTAAATCACTCATCAAATCTAGTGCTTTGTGT TTCTTTTTTTGTAATTTTTTGATGTGATGGGTTGAGATGATTGATATGCAACTTATTGTTTTTTTTTTTTTTTTGAAAAT GCATATGCAACTTATTGTTGATGTGCAGGGAGTGTGCTGAGTGGGGGAGGGAGTGTTCCAGCTCCAAAGGCATCTGCTGA GACCTGGGTGAAAATGGTGAATCAGATGCAAAGTGCATCTTTATCCACTCGCCTTGGGATTCCGATGATTTATGGGATTG ATGCAGTTCATGGCCATAATAATGTCTACAATGCTACTGTTTTTCCTCACAATGTTGGGCTGGGAGTTACCAGGCAAGTT TATGTAAATGCAGAAATTTGAGTAGTCATGAAATGATTAATATTATAGAAAATAAAATGTGAGAATTCATGAAGTCATAG TTGATAATTTGTAATTGGAATGATCTGGTTTTTCCAAATCATAATGAAGTGAATACTGTTGAAGCTATATTTGAACATCT TTGGTAAACCCCAAACTCAATCATTCAATGCATTTCCATAGTGATTTTGGAATCTTAAAATGGATGTTGTGTTATGTTAT ATATCTTTTTTTTGGATTTTAATGTAATGGAATCTACTGTTCATTAGGGATCCAGTGCTTATAAAAAAGATTGGAGAAGC TACTGCTCTTGAAGTTAGGGCTACTGGAATTCCATATGTCTTTGCTCCATGTATTGCGGTAATTAAGTAGCATTTAATGT GTTCTGTTGTTCAGAGCATATATGACATTGTTCAAGTCTTGTAAATCTGATATGTTGATGGACTTTACATCTACAGGTCT GCAGAGATCCAAGGTGGGGACGTTGCTATGAAAGCTACAGTGAGGACCCTAAGATTGTTCGAATTATGACTGAAATTATA CCTGGTTTGCAAGGAGATCTCCCTGGAAATTCCAAGAAGGGGGTTCCCTTTGTTGCTGGAAAGTAAGATTTTTGGTTGTA GCTCAATATTGCAGATAAATTTTGTTAGTCTTGTAAGGTTAATGCTCTTCCTTGAAGGGCTAGTTTAACTGTTAGAAAAT ACATTTTTTTCAAAACAGAAAATATATCTCAAATCCTTTTAAACTTTCATATTTTAAGTTTCTTGGTGGAAACAACATAT TGTCCTTATACGTTTTCTTAAAAGCCTTTCATCTTGTTCTTCTTTATTATTTTGCCTGTTTCCAGTTAAAAGTTTCCCTG CATTCCTACAAGCAAATATTACATTATCAATACTTGAAATTTCTGTATGAGTATTATGACAGTGATCAGTTTCATTCTGG ACATTACATTGATATCTTGGTTTGATGGGGTAGTTCTTACTGTGGACATAGATTCTCCTATCAATCAAAGCATCGATTAA TTACAGAACATAAATTGCATTCTAAAAAATAGGTTAAAAAAATTAAGGTAAAGAAAAATGTAGAAAAGGTTGTGAACCCA TAAGCTACTTTTGGATGGTCATTAACCATTTGAAGGGTCCTAGACATTTGGGTTGTCGTAACCGTATAGACTATAGATAG TAGGATTCACAAGTTTTTGCATTCAAATGGCTGGGACCATCCAAATGTCAAGTTATATGCTAATAATGCTATAAAGATAT GATTTCCATGTATCCAAAAAATCTTATGATTTATTACGATTTGGCCATAAAGCATGAATGTCACCTGCATATCATACATA ATACATAAAATGATGTAACAGCTTGCTCTCTCAATTCTGATAAAGGTTGTATATGTAGATATTTTTGTTGTAATCGATCA CTTTGTCTAAGAGTTCAGATATCATTTGCTTAGACTTCTGCTTCTCTGATGTCGTTTTTTTTTATGACAAAGTTTCATAT CGGATGTCATCTCAAATTTGTTAATCTATCTGCAGACACAATCTTGGCATTCCTTACACTTGGTATTGCAATACAGACCT AAGATAAAAATGTCTCTTATTTTAATTTCTTTGACCCAGGAACAAGGTTGCAGCTTGTGCCAAGCATTATGTGGGAGATG GTGGCACAACCAAGGGTATCAATGAGAACAATACTGTGATCAGTTACAATGGGTTGCTTGGAATTCACATGCCAGCATAC TTTGACTCTATTATCAAGGGTGTTTCAACAGTAATGGTTTCCTACACTAGCTGGAATGGGAAGAAGATGCATGCTAATAA AGATCTTGTCACCGGTTACCTCAAGAACAAACTGCGGTTCAGGGTAATAAAATTTGTCTATTTAGTCTTCTAGTGTAAAA ATTATCTGACTACATCAGGAAAACAAAAACAGATGTAAAGAGCTTCATATTTTTTCTCCCATCTGTCAGGGTTTTGTCAT ATCAGATTGGCAGGGTATTGACCGGATTACCTCTCCTCCTCATGCTAACTATTCGTATTCTGTTCAAGCTGGTGTTAGTG CTGGAATTGATATGGTAAATATTATTTTCATTTATTAGGAGTTAAAGAAGAAATATAATTTTTTGATAGACTAGAGTTTA ATATTATGCATTAACTTTTTATTTGGCATTTGCATTATTGACAGATTATGGTTCCCTATAACTTCACTGAGTTCATTGAT GAGCTAACCTATCAAGTAAAGAACAATATTATCCCCATGAGCAGGATTGATGATGCTGTGGCAAGAATCTTAAGAGTAAA ATTTACCATGGGTCTATTTGAAAGTCCACTTGCTGATCTAAGCCTGGTGAACCAACTGGGTAGCAAGGTACATTTTCTTA AGGACGTCATTTGAACATATGCTTGATACTTTATGCTATTCTTTCAAATGAATTTTTTTTTCCTTAATTAGTTATATATT GTCTTAAACAGGAACATAGAGAGTTAGCAAGGGAAGCTGTACGGAAATCCCTAGTGTTGCTAAAGAATGGTAAATCTTCT CAGAAGCCATTGCTTCCCCTTCCCAAGAAAGCGGCAAAAATATTGGTGGCCGGAAGTCATGCTGACAATTTGGGTTATCA ATGTGGAGGATGGACAATTACCTGGCAGGGGCTTGGTGGCAATGATCTTACAACAGGTAAGTCAATACCCTTTCTAAGTA ACTTGTCTAACTATTCCTAACATTCTCTAACCTCTTTAGACTTCTTCTCTATCTGTTCCCTTTCTTTTAATTATGTAGTA ATTAGTAATTACTCTAAAATCTTATAATAATATCCTTGGTTACAATCATTGTTGCGTAGTAATTACATTTTAAATCTTAG TTTGTCTTAGTCAAGCTAGGGCTTACACAAGAAACTTTCACTCATATTGTGTCACCACTTGAGAGATATTTGGTCGTAGT TTCCTCTAGTGATATTCCAGACTATCTGATAGTACTCCATTTTGCTAACAGGTACAACAATCCTTGATGCTGTAAAACAA ACAGTTGATCCTGCTGCTGAAGTTGTCTACAATGAAAACCCCGATGCCAACTTTGTTAAGTCGAACAAATTTTCCTATGC CATAGTTATTGTGGGAGAGAACCCTTATGCTGAAACATTTGGTGACAGTTTGAATCTAACTCTACCTGAGCCAGGTCCAA GCACCATCAGCAACGTATGTGGGTCTATTCAGTGTGTAGTTGTTCTCATCACTGGCCGCCCCGTTGTGATTCAACCATAT CTACCCAAAATTGATGCACTTGTAGCTGCATGGCTTCCTGGAACTGAAGGTCAAGGTGTTGCTGACCTTCTTTTTGGTGA CTATAAATTTACTGGCAAGCTGGCAAGAACATGGTTCAAGAGAGTTGATCAGCTCCCAATGAATGTTGGTGACAAACATT ATGATCCTCTGTTTCCATTTGGATTCGGGTTGACTACAAACCTCAAAAAATATTGA
CDS sequence (LotjaGi6g1v0193100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAGATCTTTGATTCACATTGCGGGTGGTGTTCTGCTGCTACTGTGCTTGCTGGTTTCATTTTCTGAAGCAGCTGA ATACTTGAAGTACAAAGACCCTAAGGTTGCTCTGAATAGAAGAATCAAAGATTTGATGAAAAGGATGACTCTAGAGGAAA AGATTGGTCAAATGACACAGGTTGAAAGGAGTGTTGCTACTCCTGATGCCATGAAGAAGTACTTCATTGGGAGTGTGCTG AGTGGGGGAGGGAGTGTTCCAGCTCCAAAGGCATCTGCTGAGACCTGGGTGAAAATGGTGAATCAGATGCAAAGTGCATC TTTATCCACTCGCCTTGGGATTCCGATGATTTATGGGATTGATGCAGTTCATGGCCATAATAATGTCTACAATGCTACTG TTTTTCCTCACAATATTGGAGAAGCTACTGCTCTTGAAGTTAGGGCTACTGGAATTCCATATGTCTTTGCTCCATGTATT GCGGTCTGCAGAGATCCAAGGTGGGGACGTTGCTATGAAAGCTACAGTGAGGACCCTAAGATTGTTCGAATTATGACTGA AATTATACCTGGTTTGCAAGGAGATCTCCCTGGAAATTCCAAGAAGGGGGTTCCCTTTGTTGCTGGAAAGAACAAGGTTG CAGCTTGTGCCAAGCATTATGTGGGAGATGGTGGCACAACCAAGGGTATCAATGAGAACAATACTGTGATCAGTTACAAT GGGTTGCTTGGAATTCACATGCCAGCATACTTTGACTCTATTATCAAGGGTGTTTCAACAGTAATGGTTTCCTACACTAG CTGGAATGGGAAGAAGATGCATGCTAATAAAGATCTTGTCACCGGTTACCTCAAGAACAAACTGCGGTTCAGGGGTTTTG TCATATCAGATTGGCAGGGTATTGACCGGATTACCTCTCCTCCTCATGCTAACTATTCGTATTCTGTTCAAGCTGGTGTT AGTGCTGGAATTGATATGATTATGGTTCCCTATAACTTCACTGAGTTCATTGATGAGCTAACCTATCAAGTAAAGAACAA TATTATCCCCATGAGCAGGATTGATGATGCTGTGGCAAGAATCTTAAGAGAACATAGAGAGTTAGCAAGGGAAGCTGTAC GGAAATCCCTAGTGTTGCTAAAGAATGGTAAATCTTCTCAGAAGCCATTGCTTCCCCTTCCCAAGAAAGCGGCAAAAATA TTGGTGGCCGGAAGTCATGCTGACAATTTGGGTTATCAATGTGGAGGATGGACAATTACCTGGCAGGGGCTTGGTGGCAA TGATCTTACAACAGGTACAACAATCCTTGATGCTGTAAAACAAACAGTTGATCCTGCTGCTGAAGTTGTCTACAATGAAA ACCCCGATGCCAACTTTGTTAAGTCGAACAAATTTTCCTATGCCATAGTTATTGTGGGAGAGAACCCTTATGCTGAAACA TTTGGTGACAGTTTGAATCTAACTCTACCTGAGCCAGGTCCAAGCACCATCAGCAACGTATGTGGGTCTATTCAGTGTGT AGTTGTTCTCATCACTGGCCGCCCCGTTGTGATTCAACCATATCTACCCAAAATTGATGCACTTGTAGCTGCATGGCTTC CTGGAACTGAAGGTCAAGGTGTTGCTGACCTTCTTTTTGGTGACTATAAATTTACTGGCAAGCTGGCAAGAACATGGTTC AAGAGAGTTGATCAGCTCCCAATGAATGTTGGTGACAAACATTATGATCCTCTGTTTCCATTTGGATTCGGGTTGACTAC AAACCTCAAAAAATATTGA
Protein sequence (LotjaGi6g1v0193100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRSLIHIAGGVLLLLCLLVSFSEAAEYLKYKDPKVALNRRIKDLMKRMTLEEKIGQMTQVERSVATPDAMKKYFIGSVL SGGGSVPAPKASAETWVKMVNQMQSASLSTRLGIPMIYGIDAVHGHNNVYNATVFPHNIGEATALEVRATGIPYVFAPCI AVCRDPRWGRCYESYSEDPKIVRIMTEIIPGLQGDLPGNSKKGVPFVAGKNKVAACAKHYVGDGGTTKGINENNTVISYN GLLGIHMPAYFDSIIKGVSTVMVSYTSWNGKKMHANKDLVTGYLKNKLRFRGFVISDWQGIDRITSPPHANYSYSVQAGV SAGIDMIMVPYNFTEFIDELTYQVKNNIIPMSRIDDAVARILREHRELAREAVRKSLVLLKNGKSSQKPLLPLPKKAAKI LVAGSHADNLGYQCGGWTITWQGLGGNDLTTGTTILDAVKQTVDPAAEVVYNENPDANFVKSNKFSYAIVIVGENPYAET FGDSLNLTLPEPGPSTISNVCGSIQCVVVLITGRPVVIQPYLPKIDALVAAWLPGTEGQGVADLLFGDYKFTGKLARTWF KRVDQLPMNVGDKHYDPLFPFGFGLTTNLKKY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| TMHMM | 5 | 22 | 18 | - | – | |
| Phobius | 8 | 20 | 13 | - | – | |
| PANTHER | 14 | 363 | 350 | 0.0 | – | |
| PANTHER | 14 | 363 | 350 | 0.0 | – | |
| Phobius | 21 | 25 | 5 | - | – | |
| Gene3D | 24 | 367 | 344 | 5.4E-131 | ||
| Phobius | 26 | 592 | 567 | - | – | |
| SUPERFAMILY | 29 | 376 | 348 | 7.79E-106 | ||
| Pfam | 50 | 363 | 314 | 8.6E-58 | ||
| PRINTS | 111 | 127 | 17 | 7.9E-12 | ||
| PRINTS | 213 | 229 | 17 | 7.9E-12 | ||
| PRINTS | 283 | 301 | 19 | 7.9E-12 | ||
| PANTHER | 363 | 590 | 228 | 0.0 | – | |
| PANTHER | 363 | 590 | 228 | 0.0 | – | |
| Gene3D | 368 | 590 | 223 | 6.1E-91 | ||
| Pfam | 377 | 586 | 210 | 1.5E-35 | ||
| SUPERFAMILY | 377 | 586 | 210 | 6.8E-59 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi6g1v0193100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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