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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0195800 |
| Transcript ID | LotjaGi6g1v0195800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Homoserine dehydrogenase; TAIR: AT5G21060.1 Glyceraldehyde-3-phosphate dehydrogenase-like family protein; Swiss-Prot: sp|Q8K9U9|AKH_BUCAP Bifunctional aspartokinase/homoserine dehydrogenase; TrEMBL-Plants: tr|B7FM35|B7FM35_MEDTR Homoserine dehydrogenase; Found in the gene: LotjaGi6g1v0195800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:49206826..49211925) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAGACTATTCCTCTGATTCTCATCGGTTGTGGAGGTGTTGGTTGTCACCTTCTCCAACACATTGTCTCATGCCGCTC TCTTCACTCTACTCAGGTAACATCCCTTTCAATTCACAGTTATAGATTCTTCTGTTTCAGATTCTACTTCAATTTCCCTT TTTCTGCTTCCCATCGTCACTTGCATCAAAATCCTTCCTTTATTTTGAAAATGAAAACTTTATGATGGATATTGACAACC CATTTGTCCAATTAACATTATTTTTCTTCTGGGTGTTGTTCTTTTGGGTTTTATTTTCTACCTTAAATTCATGTTGCTAT TGATTGATGGAAAATGTGTTCAAAAAATTTTGACAGCTTAGTTGATTGGTGTTTTTTATTTATTTATTTGTGTATTTTTG GTGGCAGGGTCTCTGCTTGAGAGTTGTGGGAGTTGCTGATAGTAAATCTCTGGTGGTTGTGGAGGATTTGTTGAATAAGG GGTTGGATGACAGCTTCTTGCTAGAACTTTGCCAGGTCAAGCGCGGTGGAGAATCGCTATCAAAACTTAGTCATTTTGGT ATATATCCATGCTTACATTGTCTTGGTGGTGATATGAATATTTGTATGCTTTTTATGCTTACTTTTTTGTTGTTATTTAA AGGAGAATGCCGGGTATTTGTGCATCCGGAATCACAAGGAAAGATTTTAGAGATTGCATCTCAACTAGGTAAAAGGACAG GTATGATGAAATTTTATTATGTCACACTTTACCTGCTTACTGTGAGTGATTTCAAAGAATATCCAAAATAAGAATACATT TTCATGCATCCAATCACTAAGACGGATGCTACCCTGAATCTTTTTTGTTTTGTAGGTTTGGTCTTAGTAGATTGCTCTGC TAGCTCTGACACTATTGCGGTGTTAAAACAAGGGGTTGATATGGGTTGTTGTGTTGTTATGGCAAATAAGAAGCCACTTA CATCTACAATGGTAAGATTTATGTGTTCAATAATAATTATTAAAATGGAAAGTAGGAGATACATAATCTTACATTTTAGA AGCTTTGAGAAATTTGATACATAAAATGGTCATGTGATTTGATTGTGGCGATGTCAATTATAGTTTGACAATAAATCAAA AGGAAGTATGAAATATCACATGTTAAAAAGTTTAGGTTACCTATGATTATTCTGTCATGTTAAACCTATGGTTTTAGTCT ATCCCCTTCACTTTGTTTGTTTGTTCAATACTTGTGCTTGGCTCATCTTAATAATAACTCTTATATGGAACAGGAGGATT TTGAAAAACTTTTCACGCATCCGCGTCGTATCCGGCATGAGTCAACTGTAAGTGATGTTATTTCTTGTCTCAACTAGAGC ATCACTGTATCAGCATGTTATAGCAAATTGCAATGCAGTGTATGTAAACAGTATGGATTTGCAACTAAGTTGAATAAATA TAAGCTGGAAGGTCTTTGATTAGTTATGCTTCTGTCTTTAGCTCTAATCTCACAGTAACCAAGGTTGAGCCTGTACAAGT TCTAGATGTCTTGTATGGATGCATAATGTGCGAGCAGTTGCTTTGCTAATATTCTTTAAGAAACTTTTACCTTAATAAAC AAGGAAAATGAAATCTAAAGGAAAATTTGAAGCTATGTGGTCTTGTGTGCAAACAGTATTCAACTCCTCTAGAATATGAG GTTTTTGCATGACTTATCATTGTGATTCTGATTATGAATATATAAATATATGGGAAATTCGAAATTCATATCTGAAGAAA AAAGGACCTAATGTATGAATTTTCATTTAACTTTCAACGTAAGAAACTTAGAATTATATGATCTTATTTTCTTTCTTTTT AGTGTTTTAGGATGTATATTCTAATTTTATTATGTTCTTCTTAAAAACAAAAACGTGTTTCTATAAATTTATATGGCTGT AATGCATCTTCTTAAGTCATTGTACATGCTTGTTTCTGCAACCTGTTGGTCTGATTACTCTGTTTTCGAGTTTTGGAAGA AGTTGTTTATGATGGTAGTTTTTTTATTGCTTGCTACTGGACTCTGGACTGCAGTAATTTCTGATGAGCAACCTGTAGAT TTTTATTATAAGCTGTTCAAAAACTATTGTTCCAAATTGTATATAGTCTCCTTAGACCGCCTAATTGGTTTTGAAATGAC AAAATTATTGGAATTAATGACTTTCTATCAAGGGAATATTTGGTGTCTTTGGAACTAATATTCAAAGAGGATATGAAGAA ATGGACATTGAACAGTTAGAAGCAAAATCATGACACCATCATTCTTGTGAATTGTAAATGGGATTAAGATATTCTGTTAA TGGAAAAACTTACTCTCTTAGTTTCTGGCACTCTTTTTTGTTAAAGAATGATGTATGTGTGCTTATATAAACTATTCCTC AGAATCAGGCAATTGTATACTTGCTTGTTATGTAATTAAGTTCATGAACCCATCGTGATGTTGAAATGTGTTTTGAATGG ACCTTGTTTATTTGTTAGATTCCCAAGGAATCGGTCTGGAATTCAGATAGGAAAATGTGCATATCAAATTCTTGTATGAC ATCATGGGAATATTGAAATATCAATGGATCAAGGAGACATGTCTGATCTGGTTGTAATGTTTTTAAAGGTAGGTGCTGGT CTTCCTGCGATAGCATCCGTAAATCGCATAATCTCTTCTGGTGATCCTGTTCATCGCATTATTGGGAGTTTGAGTGGTAT AATCTCCTTTTCTTCTCTGTATGATTAATTTTTTTAGATACTATTATTTGGTACTTGATCACAGCATTTTTAGTAGGGAG TTTGTATGCAAGGTATTTGTATTGATGTTTTATGCTGCATACTCTTACTAGGGACTTTGGGATACGTAATGAGTGAAGTT GAAGATGGAAAGCCACTGAGCCAAGTTGTTAGAGCTGCTAAAAGTCTGGGGTACACTGAACCGGGTTAGTGACGGCTGCA TTTGAATTTGCATTATTGATATATGAAGCCTATTGATCTGTATGATTACTATGGGGAAACTTGACATTTAAGTGTACTTT TTTAGTTTTTCCATTCCAGTATCACATGTAAATATCTGTTCTGTGGAGCTACGATAATTCTAAGCATTAGTTCTTAGAAG AATTGTTCTCTCATTGGAACAAACTTACGTGCCCTTCAATAAGCTCCATTCACACCATATCAGGAGTCAGGACACCATAT CAATCTAGATTTTATTTAGAGTGTTCATCCATACCTAAATCCTGTATTTTTAAGTGAGCAAGATATATTTTTCCTTTAAA CTCTTTCTCCTTGAACAAGCTATTAACATCATGAAATTGATACTTAGGTGTGCTATTGAACTGATTAATCTTGTATTTAC TAATTGCCTCTTAGGCACTGTTTGCTAATTGTTATACCAATAGTTTGTGAAAATTTACCTTTATGCATGTGGATTAAATA TAGTTTACCTTTAACCATGTGGGTTACTTATACATGCTATCATATTGCAGATCCACGTGATGACCTTGGTGGGATGGATG TCGCAAGAAAGGTTCAATGTGGTTTGTTTTTCTTCTGTGATGTATAATTTTGTAGCTGTTTCTGCTCTATCTAAAAAGCT AAAAAGCTCAGAATATCTTGCAATCAACAGAAAAATGTTTTTCTGGCCTGATGGGGCTTTAACAAGTTTACACACTATAC ATTTCTGAAACATTAACTTGAATGATGGCCATGTGTTATGATGAGTATCAATTTACTCCTGTAGACAGAAATCTGTTTAG TCGACCCATGTTAGCAAAATCCATGCGTGTCCATATGGTGAGTTTGGTTGTGAAGAAGGTCTCTTGCTACTGAAAGAAGT TATAGCACATAGACTGTGTGTGGCTAGCCATGTATGAGTTTCATTTCTGAAGTTGTTATGATTTGAGTTTATCGACATTT AAGCTGACCATATTTGGTCCTAGAACCTTCAACACTATTTGGAATGAAGTTAGCTGTGCATTATCATGAATAGTAACTTA AAATGTGCTGATACTAACTTTCTGCTTTTTGGGTCAATAATGAAACAGGCTTTAATTCTTGCTCGAATACTTGGTCGTCA GATTAGTTTGGATAACATTCAGGTTTTCACAGTTTTATCAATTCTAATTCCCGGTTCCCACCTTTTCTATATTTCCCTGT GGTATGTTAATAATTTCGTATGCATTTCACAGATTGAGAGCTTGTATCCCAAAGAAATGGGCCCTGATGTAATGACTGTT GAAGACTTCCTGGGCCATGGACTCTTGTTGCTTGATAAAGATATTCAAGAGAGAGTTGAGAAGGCAGCTTCAAATGGAAA TGTGCTGCGCTATGTCTGTGTGATTGAGGGCCCAAGGTATCTTCTTTTCCCTCCTTTTTTTTGTGTTCAATCAAGCATTG GTGTTACACCTTTTCAAACATGGTTTTCTCCTCTTCCATTTTCAGTTCAATCTTTTTGTATATGATTTTGTAATGTTTTC AAATTTAAAATTGTTGTTCAATCAAGCAATGGTGTTACACATTTTCAAACATGGTTTTCTCCTCTTTCATTTTCAGTTCA ATCTTGTTGTATATAATTTTGTAATGTTCTAAAATTTAAAATTGTTGTGCGACTTTGCCATGGCGAGAGCTTTATAGAAC TGCATTGCTCTTTTTAGCATGCAATAGTGTGACTCCTTTTACACTAATTGTAAATGTTTTCCTCTACAAAGGTGTGAAGT TGGTGTTCAAGAGCTTCCAAAGAATTCTCCCCTCGGAAGACTAAGGGGAAGTGATAATGTGGTAAGCTTCTTTATTTTCT TTCCATCGTCATTCATTGTGTATTTTTTATTAGGATTATTTTCCATTTTAGAGGCATGGGTACAATCTGCTTCCATCCTG TGTTTCTTAAGCATTTGCTCTATTGGAAACGTTCTGCTCTCCTAAGCAGTAACTTAAAAAACTTGATCATTTTGTATGTT GATGCAAATGGCAGTTGGAAATATACACTCGATGCTATAGTGATCAACCGCTGGTTATTCAAGGTGCTGGAGCTGGAAAT GACACTACTGCAGCTGGTGTCCTTGCTGATATTGTGGATGTTCAGGATTTATTTCCATGA
CDS sequence (LotjaGi6g1v0195800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGACTATTCCTCTGATTCTCATCGGTTGTGGAGGTGTTGGTTGTCACCTTCTCCAACACATTGTCTCATGCCGCTC TCTTCACTCTACTCAGGGTCTCTGCTTGAGAGTTGTGGGAGTTGCTGATAGTAAATCTCTGGTGGTTGTGGAGGATTTGT TGAATAAGGGGTTGGATGACAGCTTCTTGCTAGAACTTTGCCAGGTCAAGCGCGGTGGAGAATCGCTATCAAAACTTAGT CATTTTGGAGAATGCCGGGTATTTGTGCATCCGGAATCACAAGGAAAGATTTTAGAGATTGCATCTCAACTAGGTAAAAG GACAGGTTTGGTCTTAGTAGATTGCTCTGCTAGCTCTGACACTATTGCGGTGTTAAAACAAGGGGTTGATATGGGTTGTT GTGTTGTTATGGCAAATAAGAAGCCACTTACATCTACAATGGAGGATTTTGAAAAACTTTTCACGCATCCGCGTCGTATC CGGCATGAGTCAACTGTAGGTGCTGGTCTTCCTGCGATAGCATCCGTAAATCGCATAATCTCTTCTGGTGATCCTGTTCA TCGCATTATTGGGAGTTTGAGTGGGACTTTGGGATACGTAATGAGTGAAGTTGAAGATGGAAAGCCACTGAGCCAAGTTG TTAGAGCTGCTAAAAGTCTGGGGTACACTGAACCGGATCCACGTGATGACCTTGGTGGGATGGATGTCGCAAGAAAGGCT TTAATTCTTGCTCGAATACTTGGTCGTCAGATTAGTTTGGATAACATTCAGATTGAGAGCTTGTATCCCAAAGAAATGGG CCCTGATGTAATGACTGTTGAAGACTTCCTGGGCCATGGACTCTTGTTGCTTGATAAAGATATTCAAGAGAGAGTTGAGA AGGCAGCTTCAAATGGAAATGTGCTGCGCTATGTCTGTGTGATTGAGGGCCCAAGGTGTGAAGTTGGTGTTCAAGAGCTT CCAAAGAATTCTCCCCTCGGAAGACTAAGGGGAAGTGATAATGTGTTGGAAATATACACTCGATGCTATAGTGATCAACC GCTGGTTATTCAAGGTGCTGGAGCTGGAAATGACACTACTGCAGCTGGTGTCCTTGCTGATATTGTGGATGTTCAGGATT TATTTCCATGA
Protein sequence (LotjaGi6g1v0195800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKTIPLILIGCGGVGCHLLQHIVSCRSLHSTQGLCLRVVGVADSKSLVVVEDLLNKGLDDSFLLELCQVKRGGESLSKLS HFGECRVFVHPESQGKILEIASQLGKRTGLVLVDCSASSDTIAVLKQGVDMGCCVVMANKKPLTSTMEDFEKLFTHPRRI RHESTVGAGLPAIASVNRIISSGDPVHRIIGSLSGTLGYVMSEVEDGKPLSQVVRAAKSLGYTEPDPRDDLGGMDVARKA LILARILGRQISLDNIQIESLYPKEMGPDVMTVEDFLGHGLLLLDKDIQERVEKAASNGNVLRYVCVIEGPRCEVGVQEL PKNSPLGRLRGSDNVLEIYTRCYSDQPLVIQGAGAGNDTTAAGVLADIVDVQDLFP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 190 | 190 | 3.94E-19 | ||
| PIRSF | 1 | 376 | 376 | 2.7E-61 | ||
| ProSiteProfiles | 1 | 16 | 16 | 5.0 | – | |
| PANTHER | 1 | 375 | 375 | 1.1E-148 | – | |
| Phobius | 1 | 16 | 16 | - | – | |
| Gene3D | 1 | 185 | 185 | 3.0E-39 | – | |
| PANTHER | 1 | 375 | 375 | 1.1E-148 | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 3 | 11 | 9 | - | – | |
| Phobius | 12 | 16 | 5 | - | – | |
| Phobius | 17 | 376 | 360 | - | – | |
| SUPERFAMILY | 171 | 356 | 186 | 4.64E-43 | – | |
| Pfam | 171 | 369 | 199 | 7.3E-47 | ||
| Gene3D | 186 | 352 | 167 | 5.4E-54 | – | |
| ProSitePatterns | 217 | 239 | 23 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Homoserine dehydrogenase activity | Catalysis of the reaction: L-homoserine + NADP+ = L-aspartate-4-semialdehyde + NADPH + H+. | ||
| Biological process | Cellular amino acid metabolic process | The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0195800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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