Domain Predictions — View

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PF00742

Source: Pfam

Description

Homoserine dehydrogenase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0006520 View details of GO:0006520 AmiGO InterPro QuickGO	Biological process	Cellular amino acid metabolic process	The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.	Subterm of GO:0019752 GO:0044238 GO:1901564
GO:0055114 View details of GO:0055114 AmiGO InterPro QuickGO	Biological process	Oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.	Subterm of GO:0008152

Associated Lotus transcripts 11

Transcript	Name	Description	Predicted domains	Domain count
Lj4g3v2578310.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic-like [Cicer arietinum] gi\|502140918\|ref\|XP_004504375.1\|	Domains G3DSA:3.30.360.10 G3DSA:3.40.1160.10 G3DSA:3.40.50.720 IPR001048 IPR001341 IPR001342 IPR002912 IPR005106 IPR016040 IPR018042 IPR019811 IPR027795 PF00696 PF00742 PF01842 PF03447 PF13840 PS00324 PS01042 PS51671 PTHR21499 PTHR21499:SF30 SSF51735 SSF53633 SSF55021 SSF55347 TIGR00657 cd04257 cd04921 cd04922	30
Lj6g3v0292010.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic-like isoform X1 [Cicer arietinum] gi\|502135208\|ref\|XP_004502255.1\|	Domains G3DSA:3.30.360.10 G3DSA:3.40.1160.10 G3DSA:3.40.50.720 IPR001048 IPR001341 IPR001342 IPR002912 IPR005106 IPR011147 IPR016040 IPR018042 IPR019811 IPR027795 PF00696 PF00742 PF01842 PF03447 PF13840 PIRSF000727 PS00324 PS01042 PS51671 PTHR21499 PTHR21499:SF30 SSF51735 SSF53633 SSF55021 SSF55347 SignalP-TM_GRAM_POSITIVE TIGR00657 cd04257 cd04921 cd04922	33
Lj6g3v1038800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 1-like isoform X3 [Cicer arietinum] gi\|502134077\|ref\|XP_004501992.1\|	Domains G3DSA:3.30.360.10 IPR001342 IPR019811 PF00742 PS01042 PTHR21499 PTHR21499:SF33 SSF55347	8
Lj6g3v1038800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 1-like isoform X3 [Cicer arietinum] gi\|502134077\|ref\|XP_004501992.1\|	Domains G3DSA:3.30.360.10 G3DSA:3.40.50.720 IPR001342 IPR016040 IPR019811 IPR022697 NON_CYTOPLASMIC_DOMAIN PF00742 PIRSF036497 PS01042 PS51257 PTHR21499 PTHR21499:SF33 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51735 SSF55347	19
LotjaGi4g1v0370400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Aspartokinase-homoserine dehydrogenase; TAIR: AT4G19710.2 aspartate kinase-homoserine dehydrogenase ii; Swiss-Prot: sp\|P37142\|AKH_DAUCA Bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic; TrEMBL-Plants: tr\|I1K3R3\|I1K3R3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0370400	Domains G3DSA:3.30.2130.10 G3DSA:3.30.360.10 G3DSA:3.40.1160.10 G3DSA:3.40.50.720 IPR001048 IPR001341 IPR001342 IPR002912 IPR005106 IPR018042 IPR019811 IPR027795 IPR036291 IPR036393 IPR041743 PF00696 PF00742 PF01842 PF03447 PF13840 PS00324 PS01042 PS51671 PTHR43070 PTHR43070:SF8 SSF51735 SSF53633 SSF55021 SSF55347 TIGR00657 cd04257 cd04921 cd04922	33
LotjaGi4g1v0370400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Aspartokinase-homoserine dehydrogenase; TAIR: AT4G19710.2 aspartate kinase-homoserine dehydrogenase ii; Swiss-Prot: sp\|O81852\|AKH2_ARATH Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic; TrEMBL-Plants: tr\|A0A0B2PX90\|A0A0B2PX90_GLYSO Bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic; Found in the gene: LotjaGi4g1v0370400	Domains G3DSA:3.30.2130.10 G3DSA:3.30.360.10 G3DSA:3.40.1160.10 G3DSA:3.40.50.720 IPR001048 IPR001341 IPR001342 IPR002912 IPR005106 IPR011147 IPR019811 IPR027795 IPR036291 IPR036393 IPR041743 PF00696 PF00742 PF01842 PF03447 PF13840 PIRSF000727 PS01042 PS51671 PTHR43070 PTHR43070:SF8 SSF51735 SSF53633 SSF55021 SSF55347 TIGR00657 cd04257 cd04921 cd04922	33
LotjaGi6g1v0041900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Aspartokinase-homoserine dehydrogenase; TAIR: AT4G19710.2 aspartate kinase-homoserine dehydrogenase ii; Swiss-Prot: sp\|O81852\|AKH2_ARATH Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic; TrEMBL-Plants: tr\|G7JAT7\|G7JAT7_MEDTR Aspartokinase-homoserine dehydrogenase; Found in the gene: LotjaGi6g1v0041900	Domains G3DSA:3.30.2130.10 G3DSA:3.30.360.10 G3DSA:3.40.1160.10 G3DSA:3.40.50.720 IPR001048 IPR001341 IPR001342 IPR002912 IPR005106 IPR018042 IPR019811 IPR027795 IPR036291 IPR036393 IPR041743 PF00696 PF00742 PF01842 PF03447 PF13840 PS00324 PS01042 PS51671 PTHR43070 PTHR43070:SF8 SSF51735 SSF53633 SSF55021 SSF55347 SignalP-TM TIGR00657 cd04257 cd04921 cd04922	34
LotjaGi6g1v0041900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Homoserine dehydrogenase; TAIR: AT4G19710.2 aspartate kinase-homoserine dehydrogenase ii; Swiss-Prot: sp\|P37142\|AKH_DAUCA Bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic; TrEMBL-Plants: tr\|A0A151SQH0\|A0A151SQH0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0041900	Domains G3DSA:3.30.2130.10 G3DSA:3.30.360.10 G3DSA:3.40.50.720 IPR001342 IPR002912 IPR005106 IPR019811 IPR022697 IPR036291 PF00742 PF01842 PF03447 PIRSF036497 PS01042 PS51671 PTHR43070 PTHR43070:SF8 SSF51735 SSF55021 SSF55347 cd04922	21
LotjaGi6g1v0041900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Homoserine dehydrogenase; TAIR: AT4G19710.2 aspartate kinase-homoserine dehydrogenase ii; Swiss-Prot: sp\|P37142\|AKH_DAUCA Bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic; TrEMBL-Plants: tr\|A0A151SQH0\|A0A151SQH0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0041900	Domains G3DSA:3.30.360.10 G3DSA:3.40.50.720 IPR001342 IPR005106 IPR019811 IPR022697 IPR036291 PF00742 PF03447 PIRSF036497 PS01042 PTHR43070 PTHR43070:SF8 SSF51735 SSF55347	15
LotjaGi6g1v0195800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Homoserine dehydrogenase; TAIR: AT5G21060.1 Glyceraldehyde-3-phosphate dehydrogenase-like family protein; Swiss-Prot: sp\|Q8K9U9\|AKH_BUCAP Bifunctional aspartokinase/homoserine dehydrogenase; TrEMBL-Plants: tr\|B7FM35\|B7FM35_MEDTR Homoserine dehydrogenase; Found in the gene: LotjaGi6g1v0195800	Domains G3DSA:3.30.360.10 G3DSA:3.40.50.720 IPR001342 IPR019811 IPR022697 IPR036291 NON_CYTOPLASMIC_DOMAIN PF00742 PIRSF036497 PS01042 PS51257 PTHR43070 PTHR43070:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51735 SSF55347	19
LotjaGi6g1v0195800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Homoserine dehydrogenase; TAIR: AT5G21060.1 Glyceraldehyde-3-phosphate dehydrogenase-like family protein; Swiss-Prot: sp\|Q8K9U9\|AKH_BUCAP Bifunctional aspartokinase/homoserine dehydrogenase; TrEMBL-Plants: tr\|B7FM35\|B7FM35_MEDTR Homoserine dehydrogenase; Found in the gene: LotjaGi6g1v0195800	Domains G3DSA:3.30.360.10 G3DSA:3.40.50.720 IPR001342 IPR019811 IPR022697 IPR036291 NON_CYTOPLASMIC_DOMAIN PF00742 PIRSF036497 PS01042 PS51257 PTHR43070 PTHR43070:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51735 SSF55347	19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF55347	SUPERFAMILY	1	9.09