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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0196600 |
| Transcript ID | LotjaGi6g1v0196600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GPN-loop GTPase-like protein; TAIR: AT4G12790.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q6ZM63|GPN3_DANRE GPN-loop GTPase 3; TrEMBL-Plants: tr|I3S336|I3S336_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0196600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:49355958..49361697) extracted from Lotus japonicus Gifu genome v1.2.
TTTTTTTGTATTAAAATCGGAATTTAAATTCCCGTTTTTAATAAAGTGGGGTGCGAAACCCAATATGTGGGGTGCCAAAC CAAATTCTCCCACTTTACCCTCAACCCCCCGTGTTGAGACCCAAGTCAGACCTGATTTTCACCTAAAAAAGTGGGAAAAA GAAATTAAAAAAAAAGAGCGTGGCATTCCCGTCTCCACCATTCCAGTCTCCGACTTGCAGTGCTGCAACCCATCCGTAAG TTTCTTCTCTCTCTCTCTCTCTCTCTCTCCCTCCTCTTCCGCCGTCACTGGTTCCTCTCCGATTGAAAATGTTACCACAC ATGTATACGAAACAAGAATCAACTTAGGTTTTTTTCAATATGAAGATTAGAAACCCTACCTAACCCTCTTTCAAATTAGG GTTGTTTTCATGTACTGTTCCTCTTGTTTATGGCCTACTCTCATTTCGTAAATTTGTTATCGGCCATTCTCGTTTGGGGT GCTGCTTACATTACTGTTGCAGTTATCGCATCCTTCAGAGCAATCAACTTTCTCTGCACTTTCTGAACAACTATCATGGG TTATGCTCAGCTTGTTATTGGTCCTGCTGGTAGTGGCAAGGTAATTCAATTCTTCTTCTATTCACCTTATTTTGATCTGT TCTGTTAAACTACATGTTAATCTTTGTCAATTAGTCTACGTATTGCTCGAGTTTGCACCAGCACTGTGAAACTACGCGCC GAACCATACATGTTGTGAACCTTGATCCTGCTGCTGAGAATTTCGACTATCCTGTCGCCATGGGTAAGCGCGATGCGTTG TTTGTCGTGGCTTTGAATTTATTGCTTTGTGGTGGAGCTTGACTGTTTTAGGTTTGGATGGTTGCAGATGTAAGGGAGCT TATTTCCCTGGATGATGTTATGGAGGAGCTCGGATTAGGTCCTAATGGCGGTCTTGTATATTGCATGGAGTATCCTTTAT TTCGATATCATTGTTTATTTCCTGCCGCTTTAAACTTCTGTTTTTACTTGAATACTTGTACAAATTATCTCCATCTATTT CTGGTTTTTCCCTTTATTTACTTTTTGTTAGCTACTGAAATTTGTTGCCTTAATAATCATATTTAGACACCTTGAAGAGA ACCTAGATGATTGGCTTGATGAAGAGCTGGACAATTATTTAGATGATGATTACTTGGTTTTTGACTGCCCTGGTATTCAC AATCATCTCTATACCTATTTGTGTTTTCATATGTATGTATTGGTATCCACAGATTGCAATTATCAGAGTTTTGTGATTGT GAGGGGATAATATTGTTACAAAATGCAGTCACATGAGTTTGTTTATGCAAGGCCACAATCAGATTTGGTAGTATGATGCA ACTAATGCTTGTATTAGATTTTTTCCTTTTAGAACAAAACAGTTGTGTGGCCAGTCTGCATAGCCTCAAGTTAATTTTTG TAAACTTTATCACAAATCTTTTTGGTTCCAACTGACATGACAACATGTGATCACTCTAACTTAATCTTGTAATCTTTTGC AGGTCAGATAGAACTTTATTCACATGTGCCAGTACTTAAGAACTTTGTGGAACATTTGCAACAGAAAAACTTTAATGTCT GTGTTGTGTACTTACTGGATTCACAGGTTTGTGATAGATTTGCTCAAATCACACTTCTTATTAAGAAACTGACTCTCTCA GTGTTCCTTTCAGAGTCAGACTTCTTACTACTGTAGTCGTATTACCTTTGATTTGATGATTCTAACCAATTTTAGAACAT TTCCAGTTCATGACAGATGTGACTAAATTTATAAGTGGATGCATGGCCAGCCTTTCTGCAATGGTTCAACTTGAATTACC TCATGTCAATATCCTCTCAAAAATGGACCTTGTGACTAACAAAAAAGATCTTGACGAGTAATATATTCAATTAATTTCTT TCACTAATTTGTTTTGTTCACTTTATTCAGTCAAATTCTAATATATGTATCTTTTTCTCTTAGTTTCTTGGATCCAGAGC CTACCTTTTTACTGTCTGAATTGAATCAACGGATGGCTCCTCAATATGCAAAGCTGAATAAGGCTTTGATTGAACTGGTG GGCAATCTATGAATTTTTAAGAATTTGGTTGTTCCTATTTGTCAATAGCATTCATTTTGTCGCTTTTCAGTGGTAAACTG TTTATTGAAGTCTGGGTCATAATATGCTTTGCCCTATTTTATTTTCATATTTCAGTAGCAGTTTACTGTTCAGTGGTACA GGTGCTGGGATGTTAAAAAAATATGAGTACTGCTAGGAAATACTAACAACTTCATAAAAAAAATTGGACTAAAGAAAAGA TGATTTTATAGATAACGGTCTAATGTGTATTTGAGTTGATTCTTATTCTGAAAAATAAAGATAATACTTGTCTGATGTTT AGCTAGCATGAACTGTGATTGCTCTCTGAGCAAGAATCAGGGGGAGACACTCCTTCTTTTCGTATGATAATTTGCCTGAG AGCACACCTGATTGTGGACTAATTTAGAAAAAGGGAAACAAATTTACAATGTTGCCAATGAGTGTCCTTTTTAAAAGAAG TAATAAGTCATGTTATATCTGCTACACTGACCCTGTTCTGCTATAATGTCCATGTAGTTCATCACCTTTAGGTACACTGC AGACTACAGTGTGCACCTATTAATCACCGTTTTTGAGAAATATGTAATGCTTGCACTCCCTTGAGATATACTAATAAAAA GTCATGACAAGCTTTTTTGGTATTGTGTATACAATACAAACATAGATGATATATCAATTGAATTATTTAGCTCTAAAGTA AGTGTGGTGCCATAAAGCATCTGGGAATGTTGTCCCTATATATAATTGAAAAGTTATATTGATCTCTCTATCTAGGAATT AGCAACATTTTATTGACATAGCCCCAATTGAAACTTTGTCAATGTTGCAATTCAGGCAGATTAAACATTCCTCCAGATTT TATATCTGTGATCTCTATCAGTGTCATATTTCTCTTCAATTTAATGTTTTTCTTGCAAGAAATTAGGTGACACCAATCAA TAAGTGTGATTTCAGTTTCACAATCTACTATCATCAGGAACCTAAAGTGCGTGTGTAAGTTATGAATATCTTAGGGGGTT TTGCTTCCATTTGTTTTTATTTCTCATTGCACTTTTGTGTAAATATCAAGGGAATGATGTGATGGTTTTACCATTTGCCT ATTATAAACTTTAGAAAATAATGAAGGTTCTGTTTGAAATTCCTAACTCATTGCCTTATCACTTACATTTCTGAACAGAC ATTCCTAAATATTCTCTTACCACTTAGGCTTCCTAGGATCATTTATTTGAGTTCTGCAATCTTTTTTTTCTTTCTTAATT CCATCAGCTTGTTTATTTATTTATTCATTCCTTCTGTAACAGGTGAACAATTATAGCATGGTGAGTTTTATACCACTGGA CTTGAGGAAGGAAAAAAGGTATAGTCCTCTACATCCTTTAGCTGCTTATCATTGCTGCAGTGCTGCTTGTTCATCATTTT AGTGATCTGTTATTGTTAGCATATAAGGCATATAATTTGGCTCTAGTTAGTTGTTCCGTGATACTGAGTAAATGCCGTTG AGGATACTGAAATATAAAAATCGAATGACATTTTTTTTAATAGGCAAATGTTAGTTGTTAGTAATGTTAGTAAATTAGTC CTCCTTAGGGTTCGAACCCTGGAGCCTTCACACTTCATTCCCCCGAACCCTTATGTTACCACTTGAGCTAACCTTCGGGG GCAGTCAATCGAATGACATAAACTGGTGTAGATTATTTTCATGAAAAAAAGTGGTATGAATGAACTATGAAGTTTGAGTT AAATTAGACTGGAAGCCCTTGGCTATAAGTTGATAACTGGTTGCAGGATTTTGGGAAGAATACCAGTGTCAAGCCCAAGA AAACCTGATTGATTTGATTGCCTTCATGACTATTCTATCAAAATTACTTGAACTTTGAATTATGCTCTGGTCTAGGATCA AAATGCCAAATTTGCTGCTTTAAATATGAGTTCAAACTTAAAATAATAGTTGAGAAGCTGCCCACCATTGATGTTTACCG GATAAACAGGGTTTTGGTATATTGGATTGATCAGTGAATTGCAAACTATTTGTTTAACCTCAAATGCAGCTTGCTGATAT TGAGAATCAAAGGACGTGAAAGAACTCATTCTTGATTTATTTTCACCAGGCTGTACAGTTGGTTGTGTTTTCATTAATTT GCAAACTTAAGACAAATAGAAATTTCAATTAATCTTAACTAATCAAGTCCAGCTCTTAAATTACCAAAGTGGTGTTTTTT TTTTGATAAGCAAGTGGTGTTTTGGTTAACTATGGGAACTGATTTTTACTTGTCATTGAAACCTGTGCTAGTTGCATGAT TATTGTGTATTTTTCCGTTTCTACTATCCTTTCCAAAGGGGAGTTCAAGTCATTGAAATCTATATATTTAACATCCTCTG TTTGACTGTTCCATTAGCATGGCATACCCCCAAATGAAGTGATTTTTGTTTTATACTTATTATTGGATTGTTTTCAATTG CAGTATTCAATACGTATTGGCTCAAATTGACACCTGCATCCAGTATGGAGAAGATGCAGATGTGAAAGTTAGGGATTTTG ACCCAGAGGATGATGAGTAAAGCTTATCCCCTTCTGCAGCAAGTACTGTCCAGTCTTCACATCTTCGTAATATTTATCAA ACTCAACCTTTTTTATGTATAGTCTGATTAGAATGTTTTAGTGTGGATTATTAAAATTTTAGCCTCCAAATGGGGGTTAG TTGCAGAGGGTGCTTGGCCATTCCCTTGCTGGCACTGCTTGCATGGTTACAACATGAACACATTTAGACCCGTAACTTTG TTTCCCAACATTTAACAACACAAAAAGGGGGTTAAATTTGAGTTTTGGGAATGTTGATTTTTCTGCAAATAGAAATCTAG TTCAACTTTTTCCTGATATCTTGGAATTGAGTAGAGTTGCTGCTAGAAACAAACAGTTGTTGAACAAACAGTTGCTAGTA GTAGAAATTGGAAACTGAAAATTACTTTAAAGAATCTGAAGAAAAAAGCCAGAGTTCTAACCCTTTTAAAAGAAAAGATG CCTTGAAGTGATTTCATGAAAAGTCAAAGTACAACTTTCAAGAGCTGTAATTTCAATATTGAGAAGCCTATTAACAGATG ATGAGAGACGAGCAACTTAACACAATGCTTTATTTTTGGTTCACATTAAATCATGCATTGTAAGCACAGTCGCCAGCAAA CTATTGAATTTTTTATATTATTATCAAGTCTTCATGATTGGAGCCTCTTCAAGCTATGCTTTTGCAAGTACTCTTTTATC ATGAGTGTTTGCGTGATGCGTGTTTGGATATCAATTGAGCACGATGAGTGTTTGCGTAGTGCGTGTTTGGATATCAATCG AGGGCAATGTAAACATGTTTAATGTAAACATGTTTTTATATTTGTTTACGCTAGTGTTAAGGAATATCTAAATACCTATA TAAGTGAATATGTGCTACTGAAAGGGTAACTAATTGGAGGGCTAGTTGCAGACATCTTTAAAAAATAATAATTTTTAAGT GTATTTTAATATTGGCTTAAACAAACTTTTAGTCCCTGTAAAATACACTATTTTTGTTTTTCGTCCTTTGAAAATATTGT TTTTTTAACATCCTCCCAAAATTAAACATTTTGTTTTTAGTCCTTACTATCATATTTTTC
CDS sequence (LotjaGi6g1v0196600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTATGCTCAGCTTGTTATTGGTCCTGCTGGTAGTGGCAAGTCTACGTATTGCTCGAGTTTGCACCAGCACTGTGA AACTACGCGCCGAACCATACATGTTGTGAACCTTGATCCTGCTGCTGAGAATTTCGACTATCCTGTCGCCATGGATGTAA GGGAGCTTATTTCCCTGGATGATGTTATGGAGGAGCTCGGATTAGGTCCTAATGGCGGTCTTGTATATTGCATGGAACAC CTTGAAGAGAACCTAGATGATTGGCTTGATGAAGAGCTGGACAATTATTTAGATGATGATTACTTGGTTTTTGACTGCCC TGGTCAGATAGAACTTTATTCACATGTGCCAGTACTTAAGAACTTTGTGGAACATTTGCAACAGAAAAACTTTAATGTCT GTGTTGTGTACTTACTGGATTCACAGTTCATGACAGATGTGACTAAATTTATAAGTGGATGCATGGCCAGCCTTTCTGCA ATGGTTCAACTTGAATTACCTCATGTCAATATCCTCTCAAAAATGGACCTTGTGACTAACAAAAAAGATCTTGACGATTT CTTGGATCCAGAGCCTACCTTTTTACTGTCTGAATTGAATCAACGGATGGCTCCTCAATATGCAAAGCTGAATAAGGCTT TGATTGAACTGGTGAACAATTATAGCATGGTGAGTTTTATACCACTGGACTTGAGGAAGGAAAAAAGTATTCAATACGTA TTGGCTCAAATTGACACCTGCATCCAGTATGGAGAAGATGCAGATGTGAAAGTTAGGGATTTTGACCCAGAGGATGATGA GTAA
Protein sequence (LotjaGi6g1v0196600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGYAQLVIGPAGSGKSTYCSSLHQHCETTRRTIHVVNLDPAAENFDYPVAMDVRELISLDDVMEELGLGPNGGLVYCMEH LEENLDDWLDEELDNYLDDDYLVFDCPGQIELYSHVPVLKNFVEHLQQKNFNVCVVYLLDSQFMTDVTKFISGCMASLSA MVQLELPHVNILSKMDLVTNKKDLDDFLDPEPTFLLSELNQRMAPQYAKLNKALIELVNNYSMVSFIPLDLRKEKSIQYV LAQIDTCIQYGEDADVKVRDFDPEDDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 265 | 265 | 1.2E-136 | ||
| PANTHER | 1 | 265 | 265 | 1.2E-136 | ||
| CDD | 3 | 246 | 244 | 1.42181E-128 | – | |
| Gene3D | 3 | 262 | 260 | 1.3E-98 | – | |
| Pfam | 7 | 250 | 244 | 1.8E-97 | ||
| SUPERFAMILY | 7 | 250 | 244 | 1.54E-40 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0196600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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