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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0196800 |
| Transcript ID | LotjaGi6g1v0196800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT4G15415.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q8RW96|2A5G_ARATH Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; TrEMBL-Plants: tr|A0A0L9UV59|A0A0L9UV59_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0196800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:49379815..49386743) extracted from Lotus japonicus Gifu genome v1.2.
TCCATACTTGGGCCGTAATTTTGATGATGATATTTCATATTTGGGTCCCAATAACCACCAATTTACTCAGTCCTCACATG AAAAAAATAGAAAAAAGATTTTTTCAAAACTTCAAAAGTGGGACACAAATGTCATTAACTTCAACTCCTGCCCCTTTCCC CTCCTCTCTCTATATGGAGCGTGGACCTGAAATTTGAACTCAAGACACCTCTCCTTTTTTTTTTGTAAACAAAAAAAAAC CACCTTTTCCATATTCCCTCTCTCTTCTTCTTCTTCCCTTTACTCTCTGATCAAAAAAATCAAAACTTTGGGTTCAACAA CACCTTTCCTTCAATAGGGTTTATTGGTTCAATCTCAATCTCAGTGTAAGTACTTTTCTCCTGTTTATGCTGTCAACTTC TTGGAATCATTGCTTCATTCTCAGTTAATTCTTGTTTTTTGTGTTTGTGCAGAGAATCTAGAATTATCCAGAGTGATTTT CAGAGTTTTGAGGTATGGGTTTTTTTATTAGGGTTTATGGGTATGATTGCAAAGTTGCAAATGACCCTCCTATAGTGTGA TAGTGTTAGTAGTTCACAAGGGTCAAAGTTTGAAACTTTGGTAGAAAATTTGAGGTTTTGGGGTTTTTAAGGTTCTGGGG TGTTCTAGATATGATCAAACAGATGCTTAGTAAATTACCACGCAGGCCTTCAAAATCATCTCACAGTGATTCTAATAGTG ATGGAGGGGTGGTCAATGATGGGGTTGGTTCCAATGTCACCTTGAAAATCAATTCAGCTTCTTCAAAATCTTTGAATTTC GGTTCGGGTGGGTCGGATGAGGGGAATTGGACTTTTGTACTGCCCTCTACGAGTTCAGGTAAAACAAACCAAGCTAAGCT TAGTATAATACCACCACGCAAGCCTTCGAAATCAGCTCCTGCAGTTGCATCTCAAGTTGGTTCTGTAATGGCTCAAAGTG TTTATGAGGCTTTGCCGGCTTTTAGAGATGTTCCTAGTTCAGAAAAGCCGAATCTTTTTATCAGGAAGTTGAGTATGTGT TGTGTTGTGTTTGATTTTAATGATCCTGCGAAGCATCTTAAAGAGAAGGACGTCAAGAGGCAAACTTTGCTTGAGCTTGT TGATTATATTTCGTCCGTGAATTCGAAGTTCAATGAATTGACAATGCAGGAGGTCACGAAGATGGTGGCGGCAAACTTGT TTCGAACTCTGCCGTCTTCTAATCATGATGGTAAGGTTGCAGATGCTTATGATGTTGACGAAGAGGAACCCACGTTTGAA CCAGCATGGAGTCATCTGCAGATTGTGTATGAAATTCTCTATAGGTTTGTGGCTTCATCAGAGACAGATGCGAAGCTTGC TAAACGATACATTGATCATTCATTTGTGTTGAAACTTCTTGACCTCTTTGACTCTGAGGACCAAAGAGAGAGGGAATACT TGAAGACTATTCTCCACCGCATTTATGGGAAGTTCATGGTACATCGGCCTTTCATTAGGAAAGCTATCAACAATATCTTT TACCAGTTCATGTTTGAGACTGAGAAACACAATGGAATTGCAGAGTTGCTGGAGATATTGGGAAGCATAATTAATGGATT CGCTCTACCTTTGAAAGAAGAGCATAAGCTGTTCCTTGTCCGTGCTCTGATCCCTCTTCACAGGCCGAAGTGTGTCTCTA TGTATCATCAACAGCTTTCCTATTGCATCACTCTATTTGTTGAAAAAGATGTCAAGTTAGCAAATACGGTGATTAGAGGC ATTTTGAAATATTGGCCCGTTACTAATAGTTCAAAGGAGGTAATGTTCCTTGGTGAACTGGAGGAAGTTTTAGAAGCCAC TCAACCCGCAGAATTTCAGCGATGTGTGGTGCCATTGTTTCGTCAAATTGGTAGATGCCTCAACAGCCTACACTTCCAGG TACTTGCGAAATTTCCCCATTCCTTTTTCCTATGTGATATCTGCATGTACTTCAGCATTTCCCAATAATAGTGATATCTG TTTCTCTATTTCTTTCTGATGTTCAACCTTTTCCCATTTGCTTCTCTTAGCTATCTTGACAGTTTGCTGGTATATTTCCT TTTCTTTGGGACTAGGATTGTTTTGACATTTTTCACCTTAGGCCTCGTATCTGTCTATTTTCCCCTTTCTTCTTTTCTTC TTTGCCCTACATTTTGCATATGAATTTGACTTCTGCCAACTTTTGATGATGAACTTACAGAATAAGTGATGATGACTTTG CATGTTTTTTGAATAAACATTAAATTATTAACCTCCTGAATAAAAATATTTTGCATTTGACTAAGATTGTGTGAGCTAAA CCTAATAAATGTTAAATGATTTTAACCACATTTGGAGTCTCAATATTGTGGTTTCAACAGGCTCTGTGTTTTTCCCTATT GCGCCCACATCATCCCTCATTTTTCTGCTACTGCCTTCTAGGTTTTAGTTCTTTTGAAAGAACTTATCTAACTATTTTTT AGGCAAAAAATGTTTTCTCTTAAAAAAAAGCACTAAAAAGGTGTCGTAATTTAGACTGTGTGCATTGCTACTAATTGCTT TATAAAATGGAAAATTCAAGGGAGCAACTATGTGTTGTGAGGAATATATCTTAAGTAGAAGCATGTGGGCTGAATTAAAT CTTACTTGGGTAATGCGGCCTCAAGACCCATGAACTAAGTTTTTGTGAGGAGAGGTAGAGATGCGATGCACCGTATAAGG CCTAGGAGGGAGAGAAATTTGGATAAAAGGAAATATTTTTGGTATTTTAATTATTAAAAACTGACTAATAAAGATAAATA AGAGGCTGGTTCCTCCAATAGGGCCGGTTCCCTTACAACTCAATAATTCAACTCCATGACTCTAACCTAAGGAGGATAGT CCTATTTATAATAAACAGACTCTTATCAAATCCTGATAAAATATGACTCCTAAATCCTAATAAAAGATAATATCTTAAAT TAAAAGACAGACTCTCTAAATAAAACATAAACTCCTAAAATAAAATATTGACTCTAAAATAAAAAAGATAGATTCTTAAA TTAAAATAAACTTAATTCCTAATATTTAGATCCTAATAGAACTAGGGCAAAGTTGTGGAATAGGGGTACGTACTTGTGAG GATGTGGGGATGGGGATTCAAGGTGTAAGAATCAAGCAAATATATTTTCCTCTTTGACTTGAGGGAACTGAGATTGTTTT GGGGATGGATTGGCTTAGAAAGCTTGGTTGTTGTTGAAGATAATTTAAGAAATTAACACTTAAATGGGGCGGGGGTAGGG AGTGAGAAGGTCTTGAGGGGAGATCCAGATCCTTCCTTTGTAAAGCTCAATATTCTTGGAGAAACATGGTTAACACTTTA TAAGATGATGGTGAAGGGTATTATGTGGCATATCAGCTCATGAATGGAGGAGAGGAGCAACAACTGTCATTTTCCATAGC CGCTGAGGAGATTTTGGTTGAGTACAAGGATGTTTTCTTGGAGCCATGCCCAAGAGGGTTGCCACCACAGTGGGTGCAAT ATCATGGCGGTGGTGATGTCTCCAAAGTCCAAACAAGATCTACTCCTTGATGTGTCTAGGAGAGACAAGTAAAGGTATCA CCAATATGTACAACAAAGGCAGTTGAACCTGAGGCCTGGCGTTCCTTGAATCATTTCAAGAAATCAGCATAAGCTTTCAG TGTTGTAGAGACCAGAGGCTTGAGGCTCCTCATATTATAAGAAATCGTCGTAGGTGGTTTGTAGGATAATAGGACTGCGT CGTAGGTGGTTTGTGTAGGATAATAGGACTGTGGATGTGCCATGGGTCAGCAAAGAGGAGAGCATAATAGCCTTGAATAG GGGCTGGATGAACAAAATTGCGTGCCTCGTGATGCAATAACTGTCAAAGAAAATGAGATCAGGGAAGGGGACTGGCCGGC TACTGGAATGCACAAAACGGTAGTTGGGAGATCGCTGCTCACACGTTGATACGGTGTGTGCACTAGATGTATGAGAAGCA AGAGAAACATCGGCGTGTGTGAGCACATCCCTTGGCCGAGGGAGCTGAGATTTTGGCAGCTTATTGAACAACCAAACGCA ACTCATATGGTGTAGATTTTCAATTGGGAAACTTGATGAAAAAATTTCCGACAGCAGCAAACAACAGTAAATGGTACTTG GAGAAGTCATTGGATCACGCGGGAAGAGAGAGTACATGGTGGAGAGAGGTAACTGCAAAGGACAATTTTTTTAAAAAAAA AAAAGAAGAGATTTTTCCTGATGGGCAGTGGGTTCATTGGGTAAAGCACAGATTAGGATTGCCTCTCATTAAGCTCTAGA TTCCATGTTAAGAGAGGAAAATGAGAGAGCATATGATTGAATTCGTATGTCTCAAATACACAGCGGAAAAATATATATAT TTTTGTAGTGTGTGTGTGTGTGCACATATTAGGATTGCCTCTCATTAAGCTCTAGATTCCATATTAAGAGAGGAAAATGA GAGAGCATATGATTGAATTCGTATGTCTCAAATACACAGCGGAATTGTATATATATATATATATATATATATATATATAT ATATATATATATTTATGTGTGTGTGTGTGCGCGCGTGTGTGTGTGCATATACACACACTCTATTTACATTAAATTGTAGG TGAGATGTAGGATTGTTAGACCCAAGACTAGTCCTTTCTAACACGCCTTTCATGAAAGAGTACATTGCACATGGAAGTGT TGATAATGCACAAGCTCAGCAACCTTTTGCTGAAATTCATCTTTTATGTTAGAACAATAGGGATAACAACGATTGAACTT TAAACCACTTGGTCTTAGAGCCTTTGGTAATATGTCATGAACCAACTATCTCTGAAGTTTATGCTATTTGGGGTAGATAC ATGAATAGTTTTATATTATATTTTTTACTCTAGGAGGGAACTAGGATCGTAGAATTCTTCCAGCGGAAGTATTGCCTGTG TGGAAAAATTCACAGGGGCTATGGAGGTTTAGATCAAATGGACACACTTGCCTACTTGGAAAATTCTTGAGAAGCATTGT TTGAAGTTCAAGAGCATTTCCCTGATTTCCACCTTGGGGACAAGGTCAGTGGGTGAGCTGATGTGGCCCGGAGGCCCTTG ATAACTAAGGTTATGTGAAAATAGTAAGGAGGTGTAATGCACTGGATCAGGCCTAGGAGAGAAAGCAAAAACTAACTGCC TATTTGGAAGTAGTGAGTGGAGGGACGCTTGTGGGTCAGTTAGAGAGGGAGAAATATGCTGAGGGAGTTTCATTGGTGAG GTAGGCTGGAATATGGCTTGCGTTGGGAGATTGTCTTTTCATTTTCTTTTTCTTTCTTATACCAGTTGTATACACTATAC AGACTATGCCAAGATCTGAATTCCTTTGATTCAAATCTGATACTTGAAGTACAATATACATTTCCTTCTGTTTCTTTTAC GTATTTCTGCTACCCATCACTGGGATTTACTGAATGAAATTTAATGTGGAATTAGTTCTGTGGCAGGTTGCTGAAAGGGC ACTGTTTCTGTGGAACAATGATCATATTCGAAATTTGATATTACAAAACTGCAAAGCAATACTACCTATAATCTTGCCTG CTTTGGAGACAAATACACAGGGCCACTGGAACCAAGCAGTTCAGAGTTTGACCCTGAACGTGAGAAAAATATTCTCAGAT GCTGACCAGGCACTTTTTGATGAGTGCTTGATGAGATTCCAAGAAGATGAAATCAATGAACGGCAGAAGCAAGAGAAGCG GGAATCCATCTGGAAGAAATTGGAAGATGTGGCGGCATCGAAGGCTGTAAGCAATGAACCCGTCCTTGCCTCAAGATTCA TGTCCTCTGTAGCCATTTCTACTAGGAGCTAAAGTGAATGCATTCAATTGGAGGTATAGCATGCTTTAACTTTTTGCAAG TAACTGGAGGGTGGGGTTTCTGGCTCATCCTTTGTGCTTTTTATCTATGAGGCTCTTGAACCAAGTGATGAATATGTTCT GTTAAGGGATGTAGTTTATAATGGGCGCGGCATGTTTAGATTTTTAGCCATTGAGATTGTGCAGTGCTACAAAAGCAATC ATTTCTGTTATTTCCAGCCTTTTGCAGTAAAAGATCTTAACCCATGTTTATATCTACTTTCTTCTGTGAGTTTGCTACTT GCCTATATTTACTGAACTGGCTGTTATGGCAGTTTAATTTTTGAAGTGCAGGGCATGTTTGCCTTTGCTTCCGTTTTGCG TTGATGCGTTAGGATGTGTGGTAAATCAAACGGGTTCTAAGTGAACATTGTTGCGCCGAATGAATTTTCCCTTGCTTATA CATGACTTATAATTATGACTTAAAATATCTCTTAAAATTATTCAAAATAAATAAGCATGTTACTGCACCAAAAATAAAAT ACAATGTGCCCAAAGAAATAGTTGCTGCTTATAGGCACATCATAAAGTCGAATCCACGATGTCTGTTATTTTACTTGTAT ATTCAAAGTTCAATCCATTGTGTTGGTGGTAATGCCAAATGCCACATCTCAATGTTTATACCACTTTTCTTTTACTTTCA AACTACACAATTATTTAGCTTAGCACAACCATGAGGTTCAAAAATCAACACGCTCAATACATAAAGGCTTGCCCTGGTGG TGTGTCCTGTAACCAAAATTAGTATCTTCACTTACTCACCAATGGACTGTGGACCACACCTCCCACATTCATTATTCAAG ATACAACTCCTTGTTCCCATGTACTTGGTGCTATCAAGTTAGTACTATAATTTATTTTTGGTTTAACCATTCAGTATCAT CCGATCATTATTTGGATTCATATGCCAACTATTTTAGTGCATGTTTGGTTTTCAGTTTGAACTCTGTTGGCGCACATTCC AAGAGAAAATGAATGTGGTTTTCACGCTTTCCAATAGCAAACGTGAAAG
CDS sequence (LotjaGi6g1v0196800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCAAACAGATGCTTAGTAAATTACCACGCAGGCCTTCAAAATCATCTCACAGTGATTCTAATAGTGATGGAGGGGT GGTCAATGATGGGGTTGGTTCCAATGTCACCTTGAAAATCAATTCAGCTTCTTCAAAATCTTTGAATTTCGGTTCGGGTG GGTCGGATGAGGGGAATTGGACTTTTGTACTGCCCTCTACGAGTTCAGGTAAAACAAACCAAGCTAAGCTTAGTATAATA CCACCACGCAAGCCTTCGAAATCAGCTCCTGCAGTTGCATCTCAAGTTGGTTCTGTAATGGCTCAAAGTGTTTATGAGGC TTTGCCGGCTTTTAGAGATGTTCCTAGTTCAGAAAAGCCGAATCTTTTTATCAGGAAGTTGAGTATGTGTTGTGTTGTGT TTGATTTTAATGATCCTGCGAAGCATCTTAAAGAGAAGGACGTCAAGAGGCAAACTTTGCTTGAGCTTGTTGATTATATT TCGTCCGTGAATTCGAAGTTCAATGAATTGACAATGCAGGAGGTCACGAAGATGGTGGCGGCAAACTTGTTTCGAACTCT GCCGTCTTCTAATCATGATGGTAAGGTTGCAGATGCTTATGATGTTGACGAAGAGGAACCCACGTTTGAACCAGCATGGA GTCATCTGCAGATTGTGTATGAAATTCTCTATAGGTTTGTGGCTTCATCAGAGACAGATGCGAAGCTTGCTAAACGATAC ATTGATCATTCATTTGTGTTGAAACTTCTTGACCTCTTTGACTCTGAGGACCAAAGAGAGAGGGAATACTTGAAGACTAT TCTCCACCGCATTTATGGGAAGTTCATGGTACATCGGCCTTTCATTAGGAAAGCTATCAACAATATCTTTTACCAGTTCA TGTTTGAGACTGAGAAACACAATGGAATTGCAGAGTTGCTGGAGATATTGGGAAGCATAATTAATGGATTCGCTCTACCT TTGAAAGAAGAGCATAAGCTGTTCCTTGTCCGTGCTCTGATCCCTCTTCACAGGCCGAAGTGTGTCTCTATGTATCATCA ACAGCTTTCCTATTGCATCACTCTATTTGTTGAAAAAGATGTCAAGTTAGCAAATACGGTGATTAGAGGCATTTTGAAAT ATTGGCCCGTTACTAATAGTTCAAAGGAGGTAATGTTCCTTGGTGAACTGGAGGAAGTTTTAGAAGCCACTCAACCCGCA GAATTTCAGCGATGTGTGGTGCCATTGTTTCGTCAAATTGGTAGATGCCTCAACAGCCTACACTTCCAGGTTGCTGAAAG GGCACTGTTTCTGTGGAACAATGATCATATTCGAAATTTGATATTACAAAACTGCAAAGCAATACTACCTATAATCTTGC CTGCTTTGGAGACAAATACACAGGGCCACTGGAACCAAGCAGTTCAGAGTTTGACCCTGAACGTGAGAAAAATATTCTCA GATGCTGACCAGGCACTTTTTGATGAGTGCTTGATGAGATTCCAAGAAGATGAAATCAATGAACGGCAGAAGCAAGAGAA GCGGGAATCCATCTGGAAGAAATTGGAAGATGTGGCGGCATCGAAGGCTGTAAGCAATGAACCCGTCCTTGCCTCAAGAT TCATGTCCTCTGTAGCCATTTCTACTAGGAGCTAA
Protein sequence (LotjaGi6g1v0196800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIKQMLSKLPRRPSKSSHSDSNSDGGVVNDGVGSNVTLKINSASSKSLNFGSGGSDEGNWTFVLPSTSSGKTNQAKLSII PPRKPSKSAPAVASQVGSVMAQSVYEALPAFRDVPSSEKPNLFIRKLSMCCVVFDFNDPAKHLKEKDVKRQTLLELVDYI SSVNSKFNELTMQEVTKMVAANLFRTLPSSNHDGKVADAYDVDEEEPTFEPAWSHLQIVYEILYRFVASSETDAKLAKRY IDHSFVLKLLDLFDSEDQREREYLKTILHRIYGKFMVHRPFIRKAINNIFYQFMFETEKHNGIAELLEILGSIINGFALP LKEEHKLFLVRALIPLHRPKCVSMYHQQLSYCITLFVEKDVKLANTVIRGILKYWPVTNSSKEVMFLGELEEVLEATQPA EFQRCVVPLFRQIGRCLNSLHFQVAERALFLWNNDHIRNLILQNCKAILPIILPALETNTQGHWNQAVQSLTLNVRKIFS DADQALFDECLMRFQEDEINERQKQEKRESIWKKLEDVAASKAVSNEPVLASRFMSSVAISTRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 542 | 542 | 9.2E-274 | – | |
| PANTHER | 1 | 542 | 542 | 9.2E-274 | ||
| SignalP_GRAM_POSITIVE | 1 | 12 | 12 | - | – | |
| MobiDBLite | 1 | 32 | 32 | - | – | |
| PIRSF | 3 | 542 | 540 | 1.2E-234 | ||
| MobiDBLite | 62 | 89 | 28 | - | – | |
| MobiDBLite | 62 | 76 | 15 | - | – | |
| Pfam | 108 | 519 | 412 | 3.6E-187 | ||
| Gene3D | 115 | 518 | 404 | 1.1E-185 | ||
| SUPERFAMILY | 120 | 515 | 396 | 4.7E-156 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Protein phosphatase type 2A complex | A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | Protein phosphatase regulator activity | Modulates the activity of a protein phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a protein substrate molecule. |
Expression pattern of LotjaGi6g1v0196800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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