Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0204400 |
| Transcript ID | LotjaGi6g1v0204400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | protein kinase family protein; TAIR: AT4G30960.1 SOS3-interacting protein 3; Swiss-Prot: sp|O65554|CIPK6_ARATH CBL-interacting serine/threonine-protein kinase 6; TrEMBL-Plants: tr|V7AXV8|V7AXV8_PHAVU Non-specific serine/threonine protein kinase; Found in the gene: LotjaGi6g1v0204400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50169271..50170590) extracted from Lotus japonicus Gifu genome v1.2.
AAATCCAGTAGCAGTAACGATGTGAGCTCCACATTGCTCCATGGCAAGTACGAGCTAGGCCGTCTTCTCGGCCATGGAAC ATTCGCGAAGGTGTACCACGCGCGGCACCTTGAGTCCGGCCGGAGCGTGGCGATCAAGGTGGTGGGGAAGGAGAAGGTGA TCAGAGTCGGCATGATGGAGCAGATCAAGCGAGAAATCTCCGCCATGAGCATGGTCAAGCACCCCAACATTGTCCAGCTT CACGAGGTCATGGCCAGCAAAACCAAGATCTACATCGCCATGGAGCTCGTTCGCGGCGGCGAGCTTTTCAACAAGATCGC CAGAGGCCGCCTGAGAGAGGACGTCGCTAGGCTCTACTTCCAGCAGTTAATCTCCGCCGTTGATTTCTGCCACAGCCGCG GTGTCTACCACCGTGATCTCAAACCGGAGAATCTCCTGCTCGACGAGGACGGTAGCCTCAAGGTGACCGACTTCGGTCTC AGCACATTCGCCGAGCACATGCGCCAGGACGGGCTGCTCCACACCACATGCGGAACTCCGGCCTACGTTGCGCCGGAGGT CATCGGAAAAAAGGGCTATGACGGCGCCACGGCTGATATCTGGTCCTGTGGGGTTATCCTGTACGTGCTCTTAGCAGGGT TTCTACCCTTCCAGGACGAGAATCTGATGGCTATGTACAAGAAGATTTACAGGGGAGACTTCAAGTGCCCTCCATGGTTC TCCCCTGAAGCTCGAAGGCTCATCACCAAGCTTCTCGACCCGAATCCGAGTACCCGAATTACAATCTCCAAGATCATGGA GTCTTCCTGGTTCAGAAAATCGGCGAAGAGTGGTGCTGAGATGAAGAAGCATGAGCAGGAGCTGGAATTTGATTTACAGG AGAAATTGAAGCTGCAGGAGCAGGAGCAAGTGCAGGAGCAACCCTCGACGATGAATGCCTTTCACATAATTTCGCTTTCA GAGGGGTTTGATTTGTCGCCGCTGTTTGAGGAGAGGAAGAGGGAGGAGAAGGAAGAGATGAGATTCGCGACGACTAGGCC GGCAAGCAGTGTGATTTCGAGGCTGGAGGAAGTGGCGAAGGCGGGGAAGTTTGATGTGAAGAAGAGTGAAGGCAAGGTGA GGTTGCAGGGTCAGGAGAGGGGGAGGAAGGGGAAGCTGGCTATTGCGGCGGACATGTATGCGGTGACGCCGTCGTTTCTG GTGGTTGAGGTGAAGAAGGACAATGGTGACACCTTGGAGTACAACCAGTTCTGCAGCAAAGAGCTTCGCCCTGCACTCAA GGACATAGTGTGGAGGACTGAGACTCCAACACCAGCTTGA
CDS sequence (LotjaGi6g1v0204400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGAGCAGATCAAGCGAGAAATCTCCGCCATGAGCATGGTCAAGCACCCCAACATTGTCCAGCTTCACGAGGTCAT GGCCAGCAAAACCAAGATCTACATCGCCATGGAGCTCGTTCGCGGCGGCGAGCTTTTCAACAAGATCGCCAGAGGCCGCC TGAGAGAGGACGTCGCTAGGCTCTACTTCCAGCAGTTAATCTCCGCCGTTGATTTCTGCCACAGCCGCGGTGTCTACCAC CGTGATCTCAAACCGGAGAATCTCCTGCTCGACGAGGACGGTAGCCTCAAGGTGACCGACTTCGGTCTCAGCACATTCGC CGAGCACATGCGCCAGGACGGGCTGCTCCACACCACATGCGGAACTCCGGCCTACGTTGCGCCGGAGGTCATCGGAAAAA AGGGCTATGACGGCGCCACGGCTGATATCTGGTCCTGTGGGGTTATCCTGTACGTGCTCTTAGCAGGGTTTCTACCCTTC CAGGACGAGAATCTGATGGCTATGTACAAGAAGATTTACAGGGGAGACTTCAAGTGCCCTCCATGGTTCTCCCCTGAAGC TCGAAGGCTCATCACCAAGCTTCTCGACCCGAATCCGAGTACCCGAATTACAATCTCCAAGATCATGGAGTCTTCCTGGT TCAGAAAATCGGCGAAGAGAGAAATTGAAGCTGCAGGAGCAGGAGCAAGTGCAGGAGCAACCCTCGACGATGAATGCCTT TCACATAATTTCGCTTTCAGAGGGGTTTGA
Protein sequence (LotjaGi6g1v0204400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMEQIKREISAMSMVKHPNIVQLHEVMASKTKIYIAMELVRGGELFNKIARGRLREDVARLYFQQLISAVDFCHSRGVYH RDLKPENLLLDEDGSLKVTDFGLSTFAEHMRQDGLLHTTCGTPAYVAPEVIGKKGYDGATADIWSCGVILYVLLAGFLPF QDENLMAMYKKIYRGDFKCPPWFSPEARRLITKLLDPNPSTRITISKIMESSWFRKSAKREIEAAGAGASAGATLDDECL SHNFAFRGV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 214 | 214 | 44.852 | ||
| Phobius | 1 | 142 | 142 | - | – | |
| Gene3D | 1 | 243 | 243 | 2.7E-89 | – | |
| PIRSF | 1 | 212 | 212 | 4.5E-31 | – | |
| PANTHER | 2 | 224 | 223 | 6.1E-138 | – | |
| SUPERFAMILY | 2 | 219 | 218 | 2.02E-76 | ||
| PANTHER | 2 | 224 | 223 | 6.1E-138 | – | |
| Pfam | 3 | 214 | 212 | 4.7E-63 | ||
| SMART | 3 | 214 | 212 | 1.5E-75 | ||
| ProSitePatterns | 78 | 90 | 13 | - | ||
| TMHMM | 143 | 160 | 18 | - | – | |
| Phobius | 143 | 160 | 18 | - | – | |
| Phobius | 161 | 249 | 89 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0204400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…