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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0217600 |
| Transcript ID | LotjaGi6g1v0217600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aspartic proteinase; TAIR: AT1G62290.1 Saposin-like aspartyl protease family protein; Swiss-Prot: sp|Q42456|ASPR1_ORYSJ Aspartic proteinase oryzasin-1; TrEMBL-Plants: tr|V7AY39|V7AY39_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0217600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51971272..51975928) extracted from Lotus japonicus Gifu genome v1.2.
ACGAACTTTTATCATAGTCGTTCATTATTCACTATTTATCTTGAAGTGACCGCTAATATCGGTTAATATCCAAACACCGA AGAAAAGAGCAACGTTCTTATAGAAACGCATGCATCACGTGGTGTCGTGGTCCATAATATGGATTAGTTTGGCTAACAAC TTGCAAGTACCCAATTAAAAGTGATCATCTGGATAAGTCGTACTTGCACCCAAAACTCTACTTCCATTTTCTTACCGTGC GAGAAATATCATTATCCTACACGAAACTACGCAGTGGTTTCCATTTAAGGTTAAAATAATGTTCCTATTCAGCATCATCA TAAGCAATACAAAGTACAAATTACAAAACAATCATAACAAAATGGTAAACTTAGATTTTGAGGAAAAAGGGGAAATGGTA AAATGTTCAAACACCATATATAGTTAAACTTTATAATATGAAAGACATCATGTCACTCCCTTTGTATTGTAGAACTTGTA GCCTTGAACCTGCAGTATCGTATCTCAGTCAAATACCTCTGCTTCTGGTCTTAAAAGTCAACATCATCATCATCAGGTGT GTGAGTTTTTTTGAGTTTGTCTCTAATAATACTTGGTTATTAGCTTTAATTTTACAACTTCAGTATTTGCTTAACTCCAC TATGAACCTTGAATATGAGGTTATAATTGTTTGTAGATATAAATAATCTGCCTCTCTTGTGTTAATTCTGCTGATATTCT TTTAATATGTTGAACCAGATGAGTTTGTAAGTATGGAATTCAAGTATATGTTGGTTGTTGTTATGTGCCTATGGGCTTGG TCTGGATTATTGGCTTGTGCAATTTCTGATGATGGGTTGATGAGGGTTAGTCTAAAAAAGAGGGCTTTAAACTTTCACAG TCTTAATGCTGCAAGAATCAAAGAGGCTGAACAGCAAAGAGATTCTGGGAGTGTTGGTAAAGATTGTTGTGCTGAAAATA TAGTGTATCTTAAGAATTATCTTGATGCACAATATTTTGGGGAAATTAGTATTGGTTCTCCCCCACAGTACTTCAATGTT GTGTTTGACACCGGCAGCTCGAATCTTTGGGTCCCGTCTTCCAAATGCATCTTTTCTGTAAGTTACCTCACTGATCTGAT TGTGATGAAGTTGAGTACTCCTTCAAGTTTTATTTCTTGAATGAGCTTATTGTGAAAACAAATGTGACACATGCAGATCG CTTGCTATTTTCGTTCCAAGTATAGGTCGAGGATATCTAGCACCTATACCGAAATCGGTAACTTTGGATTAACAAAACAT TTAATCTATAATTATATGCTTTCTTTTGTTAGGTGGTTCCATTAACAGAGCTATGTTTGTAATGATGTGCATACTTAAAG TTGCATTTTGGGAAAATATCTAGGAACATCTTGCAAAATCCCTTATGGCCAAGGATACATTTATGGATTCTTCAGCCAAG ATAATGTTCAAGTAGGGGATATCATCGTCAAAGATCAAGTCAGTGTTTTTTCTATTTTACTTTTCAATCAATGTTGTGAT CAAGTTTTATATGCTTCTTTGGTTACACTTAATGCTGGTTACTTCCCATCCTCCAGGAATTTGCTGAGATTACAAGGGAA GGATCTTTGGCCCTTTTAGCTCTTCCATTTGATGGGATACTTGGACTTGGATTCATGGATATTTCAGTTGGAGGAGTCAC TCCAGTGTGGTAAACCTGTGAACATGATAACTTTATTAATTCATCTATCTGTTCATTGATCTTGCTTCAATTTTCCTATT CAAATTAGTCAACAAGAGTAAAATATTATTGGTCGTAATAGGGTAGAAGAAAAATCAAACTCTCCCATTTTCTGAGACCA TTGATGTCCCAAATGCAATGGTTAGTTTTGTGATACAGGTATAATATGATAGAACAAGGGAAACTATGCTGCCAAATGTT TTCTCTTTGGCTAAATCAAGACCCAATGGTAGAGATAGGGGGTGAGATTGTCTTTGGTGGTGTTGACTTCAGGCATTTTA GAGGTGACCATACTTATGTTCCACTTTCTCAAAAGGGTTATTGGCAGGTATATTTTATATATAAATTTCATCCATAGCCA TTATCATCAACCATGTCATAATTAACTTTTGGTGTTTGCACCTGCAGATTGAGGTGGGAGATATTCTACTAGCAAATAAT TCTACAGGTCCTCTTAAATTTCTATTTGCGACGACGCTTAATCTATCTCAATATTTTCTCATTGCTTCTTGTAGTTGTGA TTGTGAGTGAATACTGTGTATGAAGAGATTAAATTAAGTTGCTAAAGGTTTCATCATATTAGGAGGTTACATGTGACTAG TTTTTTCATAAAGCCATTCAACTTTCAGCTGACATTGTCTAGAACTAAAAGGGTTGACACATCAATTTTTGATTTTTAAT TTAAGTTGTCCTCTTGGTTCATTTTTCACAGCATAAATGTTCTGACATCTGACATTCACCAATGCCACCCTCGGTACCTT TTACTAACAATAGAAAATTGTGTACAATATTTTACAGGAATATGTGAGGGAGGCTGTTCTGCAATTATAGACTCAGGAAC CTCCTTAATTGCTGGTCCAACTGTATGATCTCGAACACTATTTCTCTCTTGATACCTTGTTTTGTTCCCTTTTCCTTTGA TGTTATTTCTTACTAACTCTTGTTTGCAGAGTGTTGTGACTCAAATTAACCATGCCATTGGAGCAGAGGGATATGTCAGT CTTGAATGCAAAAACATTGTCCATAACTATGGGAATTTGATATGGGAATCCTTGATTTCTGGGGTTTGTTCTCTTTGTCA TTTTATAGTTATACTAGTAATGAGTATCCAGCTAAAAGTCCTTTATTCCTTTACATGTCTTCTTTTGCCTCATGAATGCA GTTAACTCCTGAGATCATATGCAGTGACATTGGACTCTGTTCAAATAATGGACTTCATTCAGTGGAGTACAGTTTTCTAT TACCCTAATCTTGATTTTTTTGAATCACATTTCTTTGTTTCAGTTCTCTTAACAAATGTCTAACTTTAACCTGCAGTGGT GTTATTGAAAGACTGGAGCATAATGAAAGTTTGGACGGATCGAAAACTTGGGAGAGACCCTTTTGTACTTTCTGCAGTAT GATTGCCTTTTGGATGCAAGCTCAGGTTAAGCAAAGCAATGTAAAGGAAAAAGTACTAAAATATGTGGATGAGGTAGTTG TTACAAACTTGCAATTGTTATATCCTCATTATCTTGTTCAGAATACTTACGCTTGAGTTTGTTATCACTTTATGCTTCCA AATAAATTAAGCACTCATAAGCTTTTTCTTTGTCTCAATTTCCTTATGTAAAAGCTGTGTGAAAAGCTCCCAAATCCGGC GGGACAATCATTTATAAACTGCAATAGTACTGCAACTATGCCACCCATTACATTCAAGATTGGAAACAAGTCCTTTGCCC TCTCTCCAGAACAGGTCTGAGTTTTGTAATCTTTTTTCCTCTTTAAGGTGAACTCCACATTTGTTAGATTAACATAAACT CTCTGCCGTTTTTTACAGTAGTATCTCAGCACTATAAATTGGTCATGCATAATGTTTATATTAGATGCCTACCTCAATTT TATTTGGTTATCTCTAACTTCACCTCATATTTGCTTCTTGCCCTTTTCATAAAAGAAATGTTTGACAGTTATCTCATCCA TATTTGGTTACTGTTCTTAATTTTTCAGACTTCTAATATTCATCTCTCTTTCTTTCTCAGTATATCCTTAGAGTTGAAGG AGGGTGTTCTACTGTCTGTTATGGCGGTTTTGTTGCTCTAGATGTACCTTCCCCACAGGGTCCTCTCTGGTATTGCATAC TTAAATTCTTGTTAATGTTTTTCTTTGACAAAGTATTTATGCATAAACCACTACACAAATGAACCAGATGCAGCATTTTC TCTCTCTTTCTCTCAAGTTGTATGACTTTAGTGTCATGTGTGCAGGGTTCTTGGAAATATTTTATTGAGAGCATATCACA CAGTGTTTGACTATGGCAATCTCCGCATAGGATTTGCAGAAGCTGCATAGTGATATTGCTATGATACCAAATTCTTTATA AAGGAAAAGTTTGGAGGTTTACAATTACATAGTTTACAACAGCAAATAATAGTTACTTCCCATCAGAATTTCTGTCTGAG GGTCTCTTGTAAATGGTGATTGCTATATGTTTTATCAATAAGATTTGTGATAATTCTGCACAATGACTAATTTGTGAAAA GGGTATGTACTCCAAGAGATTGTAGTTTGAACAACATAAGTTTGACATTGTTGCTGGCTAAATCTTTTCTGGTCAAGTAA ACACTGCTGAGTGAAACTACCAAGCGCCTCTTACAAGATTATAAAATGAACATTGCTGCTAAGAGAAATGTTTAATACAC TCGTATAGTTTCTTTTTCCAAATTGCTTTCTTTTGATTGATTAAAATAGATGTCATGCAAGCTATTATTAGATACTTGTG AGAAAGAAAATCAGGATGACTGAAAAACAGGTTATAATTCTACATTCAACACAGATACTACTACGTACTAACTTTCTGAT TTAAAGGTTTGAATTAAAAAAAAAAAAAAAATCTTCATATTTTAGCCCCTCCAAGTGTTGTGGTCAAGCCCCGCCACAAT CTGCATCTCTCTTCTTT
CDS sequence (LotjaGi6g1v0217600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATTCAAGTATATGTTGGTTGTTGTTATGTGCCTATGGGCTTGGTCTGGATTATTGGCTTGTGCAATTTCTGATGA TGGGTTGATGAGGGTTAGTCTAAAAAAGAGGGCTTTAAACTTTCACAGTCTTAATGCTGCAAGAATCAAAGAGGCTGAAC AGCAAAGAGATTCTGGGAGTGTTGGTAAAGATTGTTGTGCTGAAAATATAGTGTATCTTAAGAATTATCTTGATGCACAA TATTTTGGGGAAATTAGTATTGGTTCTCCCCCACAGTACTTCAATGTTGTGTTTGACACCGGCAGCTCGAATCTTTGGGT CCCGTCTTCCAAATGCATCTTTTCTATCGCTTGCTATTTTCGTTCCAAGTATAGGTCGAGGATATCTAGCACCTATACCG AAATCGGAACATCTTGCAAAATCCCTTATGGCCAAGGATACATTTATGGATTCTTCAGCCAAGATAATGTTCAAGTAGGG GATATCATCGTCAAAGATCAAGAATTTGCTGAGATTACAAGGGAAGGATCTTTGGCCCTTTTAGCTCTTCCATTTGATGG GATACTTGGACTTGGATTCATGGATATTTCAGTTGGAGGAGTCACTCCAGTGTGGTATAATATGATAGAACAAGGGAAAC TATGCTGCCAAATGTTTTCTCTTTGGCTAAATCAAGACCCAATGGTAGAGATAGGGGGTGAGATTGTCTTTGGTGGTGTT GACTTCAGGCATTTTAGAGGTGACCATACTTATGTTCCACTTTCTCAAAAGGGTTATTGGCAGATTGAGGTGGGAGATAT TCTACTAGCAAATAATTCTACAGGAATATGTGAGGGAGGCTGTTCTGCAATTATAGACTCAGGAACCTCCTTAATTGCTG GTCCAACTAGTGTTGTGACTCAAATTAACCATGCCATTGGAGCAGAGGGATATGTCAGTCTTGAATGCAAAAACATTGTC CATAACTATGGGAATTTGATATGGGAATCCTTGATTTCTGGGTTAACTCCTGAGATCATATGCAGTGACATTGGACTCTG TTCAAATAATGGACTTCATTCAGTGGATGGTGTTATTGAAAGACTGGAGCATAATGAAAGTTTGGACGGATCGAAAACTT GGGAGAGACCCTTTTGTACTTTCTGCAGTATGATTGCCTTTTGGATGCAAGCTCAGGTTAAGCAAAGCAATGTAAAGGAA AAAGTACTAAAATATGTGGATGAGCTGTGTGAAAAGCTCCCAAATCCGGCGGGACAATCATTTATAAACTGCAATAGTAC TGCAACTATGCCACCCATTACATTCAAGATTGGAAACAAGTCCTTTGCCCTCTCTCCAGAACAGTATATCCTTAGAGTTG AAGGAGGGTGTTCTACTGTCTGTTATGGCGGTTTTGTTGCTCTAGATGTACCTTCCCCACAGGGTCCTCTCTGGGTTCTT GGAAATATTTTATTGAGAGCATATCACACAGTGTTTGACTATGGCAATCTCCGCATAGGATTTGCAGAAGCTGCATAG
Protein sequence (LotjaGi6g1v0217600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEFKYMLVVVMCLWAWSGLLACAISDDGLMRVSLKKRALNFHSLNAARIKEAEQQRDSGSVGKDCCAENIVYLKNYLDAQ YFGEISIGSPPQYFNVVFDTGSSNLWVPSSKCIFSIACYFRSKYRSRISSTYTEIGTSCKIPYGQGYIYGFFSQDNVQVG DIIVKDQEFAEITREGSLALLALPFDGILGLGFMDISVGGVTPVWYNMIEQGKLCCQMFSLWLNQDPMVEIGGEIVFGGV DFRHFRGDHTYVPLSQKGYWQIEVGDILLANNSTGICEGGCSAIIDSGTSLIAGPTSVVTQINHAIGAEGYVSLECKNIV HNYGNLIWESLISGLTPEIICSDIGLCSNNGLHSVDGVIERLEHNESLDGSKTWERPFCTFCSMIAFWMQAQVKQSNVKE KVLKYVDELCEKLPNPAGQSFINCNSTATMPPITFKIGNKSFALSPEQYILRVEGGCSTVCYGGFVALDVPSPQGPLWVL GNILLRAYHTVFDYGNLRIGFAEAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| PANTHER | 1 | 502 | 502 | 9.0E-165 | ||
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| ProSiteProfiles | 1 | 22 | 22 | 5.0 | – | |
| PANTHER | 1 | 502 | 502 | 9.0E-165 | – | |
| Phobius | 7 | 20 | 14 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| SUPERFAMILY | 10 | 504 | 495 | 1.09E-104 | ||
| Phobius | 21 | 25 | 5 | - | – | |
| Phobius | 26 | 505 | 480 | - | – | |
| Gene3D | 29 | 239 | 211 | 2.5E-58 | ||
| Pfam | 80 | 504 | 425 | 3.9E-112 | ||
| ProSiteProfiles | 81 | 502 | 422 | 67.447 | ||
| PRINTS | 87 | 107 | 21 | 8.9E-26 | ||
| ProSitePatterns | 96 | 107 | 12 | - | ||
| PRINTS | 233 | 246 | 14 | 8.9E-26 | ||
| Gene3D | 240 | 310 | 71 | 7.5E-38 | ||
| PRINTS | 283 | 294 | 12 | 8.9E-26 | ||
| ProSitePatterns | 283 | 294 | 12 | - | ||
| ProSiteProfiles | 311 | 351 | 41 | 11.296 | ||
| Gene3D | 311 | 350 | 40 | 7.5E-38 | – | |
| SUPERFAMILY | 313 | 414 | 102 | 9.64E-22 | ||
| Pfam | 315 | 347 | 33 | 2.6E-12 | ||
| Gene3D | 357 | 414 | 58 | 8.4E-49 | – | |
| ProSiteProfiles | 375 | 416 | 42 | 10.376 | ||
| Pfam | 377 | 414 | 38 | 1.6E-8 | ||
| Gene3D | 415 | 505 | 91 | 8.4E-49 | ||
| PRINTS | 478 | 493 | 16 | 8.9E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. |
Expression pattern of LotjaGi6g1v0217600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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