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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0219300 |
| Transcript ID | LotjaGi6g1v0219300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pectinesterase; TAIR: AT4G33230.1 Plant invertase/pectin methylesterase inhibitor superfamily; Swiss-Prot: sp|Q9SMY6|PME45_ARATH Putative pectinesterase/pectinesterase inhibitor 45; TrEMBL-Plants: tr|A0A0L9UBW1|A0A0L9UBW1_PHAAN Pectinesterase; Found in the gene: LotjaGi6g1v0219300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:52263316..52269737) extracted from Lotus japonicus Gifu genome v1.2.
CTTATTTTTCATAGATTTGGTGTCGCATGGTTTAAATTTGAATGAAATGTGTCCAGCCATGTAGGTTGTATGTATTTCTT TTTGCCAACTTCATATTTGTTGTGAAATGGTAGATGTATGATACGAGAAATACAAGAAAGGTTGTAAAAGTAAAGAGCAA AACCTGTCATCACCTACAAATCAACTTGCAGCCCTTAACTAAATTCCAAATATAGACAAGCCTAGAATGTCTCTCATCCA CATGAGCTAGTTGTCCCTTCAGGCAAATGGTATTAAATTTGCAAATGTCGGAACAAAGAAGACGAAGGAGAAAAAACTAA TAACATTAAACCAATTGTTCATTCTCTTTCCCTCTTGTCTCCGGAGTCAAGGCAGAGTTGCCTCCCTCTGCCTTAGACAA ATTTCACAATGGCATTTCAGGATTTTGATGTCATTTCAGAACGGCGAAAGAATGAAGAGAAGATGAAAATGAGAAAGAAG ATTATCATCATTGGAATTTCCTCCATTCTCCTTGCATGTGTGGTAGCTGCTGCAGCATTTGTTGTTGTCAAAAGAACTGG CCCTGACAGCAACAACAAAGTGAATGCTCCCTCAGCACCTGCGAACGCCCAACAAGTCGATCAATATTCAAGGCTTGTGA AAATGATATGCAGCTCAGCACAATACAAGAGCAAATGTGAAAGCACCCTTACTGAGGCATTGAAGAAGGACCCTAGACAT GCAAAGCCAAAGGATCTTCTCTTGATTTCCATGGTGCTTGCTGAGGCTGAGATTAACAAGGCCTTCAACAAAACCGCCAC CTTGAAGTTTGCTTCTGAGGAGGAGAAAGGAGCATATGAAGATTGCAAGCAGCTCTTTGAGGATGCCAAGGAAGAAATGG GATTCTCTATCACTGAAGTTGGATCAAATGATTTGGCTAAGCTTTCCGAGAAATCTTCTGAACTTAACAACTGGCTCAGT GCAGTCATATCTTACCAACAGACCTGCATTGATGGGTTTCCAGAAGGAAAATTGAAGACTGAATTTGAGAAGCTCTTTAA GGAATCTCGGGAACTTATTAGCAATTCCCTTTCTGTTGTGTCAGAGGTGTCTACATTCTTTTCTGCATTCGATGGAGCTT CAGGGTTTCACTTACCATGGGGAAAAACTGATGCCCCTCTAGCTCCTGCTCATGCTCCTGGTTCTGGCATTGTTCCTGCT CCTGGTCCTGCTCCTGGTCCTGGTTCAGCTGCTCCTGGCCCATCTCCTGTTTATGCTCCTGGACCTGCTCCAATTTTGGC TCCTGGTCCTGGTCCTGCTTGGCTTAGCCTTCCAGAGTTGAAGGGAACAGATGAGAAACCCATACCTAATGTCACGGTGG CAAAAGATGGCAGTGGAAACTTCAAAACCATCTCTGAAGCTTTGGCAGCAATCCCACCAACCTACGAAGGAAGGTATGCA ATTAGTGCTTGTGAGGTTCAATTTTAAGGAAACAATGATATTTTACAACTCTCAAGAAAGCTTTTGGAATATAACAAAAT AAAAAAGTGGAATACACTTCATAACATTCATTTTAACACATTGCTAATAATGGAACTAGTAAATTTCATCTAAAATTGAA AGTGTACTAATTCCTATTCAGAAAAGAAAAGTGTAGACTTTTTCCTCTAACTGTTGCGTTCATTTATCTATTTTAATTCG GGTCATCTATGCCCATGCATAGCTTATGATATTTTCTAATGTTGAAATGCATGCAGGTACGTGGTTTATGTTAAAGAAGG AATATATGATGAAACAGTGACGGTGACAAAGAAAATGGTAAATGTAACCATGTATGGTGATGGATCTCAAAAGAGCATCA TCACTGGGAGCAAAAATTTTGTGGATGGAGTCAGGACTTTCCAAACTGCCACATTTGGTAAGTATATTCAAAACTCCATG AAAACAGCATGCACCTACTATATATTATTTGTGCAGCAAGTGGATATGCTAATGTAACTTAACTCATTTTTCCCCTGCAC ACTCCAGTGGTACTTGGAGAAGGGTTCTTGGGCAGAGAAATGGGATTCAGAAACACTGCTGGAGCAGAAAAACACCAAGC TGTGGCTGCCAGAGTACAAGCAGATCGTGCAGTGTTTGTAAAATGTGCCTTTGAGGGATACCAAGACACTCTATACGCCC AAACCCACAGACAGTTCTACCGTGATTGTGTCATTGCCGGCACAATTGACTTCATCTTTGGTGATGCAACTGCAGTGTTC CAGAACTGCACTATGGTTGTTAGAAAACCACTGGACAACCAGCAGAACATTGTCACTGCTCAAGGGAGACTTGAAAAGCA AGAAAACACAGGCTTTGTTCTCCAAAACTGTGTGATCAAGGCTGATGAACAACTTGTTCCAGTGAAGGGTAAGATCAGGA ACTACCTTGGGAGGCCATGGAAGGAGTACTCAAGAACCATCATCATCGAATCAGAAATTGGGGACCTTATCCACCCTGAT GGGTGGCTACCTTGGGAAGGAAACTTTGCACTCAGCACATTATATTATGCTGAATATAACAACAAAGGACCTGGTGCCAG CACTAATGCCAGGGTCAATTGGCCTGGCCGCCATGTCATTAACCGGGATGAGGCTGGCCAGTTTACAGTGGAGACTTTCT TGCAAGGGACATGGATCAATGGCACAGGTGTACCAGCTCAGCTGGGCTTGTACAATTGAATGGTCTTTTGCATGTAACAT TTTAATGAATACTAATTGGGTTGAATGCTTGAGTCAATTCATATCTATTCTGGAACTTTTAACAACATTAATTTAAATAT GATTCATTTGACAATTAACTATCATCTAAATAGTTTTAAATAAAATTGTTTAAGCTCCTTATTCATTAAATGACGATAAT TAAAGAAAAATTCTTAACTTTCATCAAACTACTATGTTCTCTAAAAAGTTAATAATGTGATATAACTAGGGAACGTTTGT AATGGTTGTGATAAGCATGCCTCCCTGCCAAAACCTCTTCAGGTGAAAGAAAATAAGAAATTTTCACAATCACATGGTCA CCTTTACTGCCACTCTTGATGGCTACATTGGCAAGAACTGCATCCAGGTCTGTAGGTTCTAGCATTATTCAAAATCATGA CTCGTGACGCTAGGATAAAACTATATCATGACATTATTGGCAAAATCATGTTTTAATGGTACCTAAAAGTTACCAGAGAG CTCAGACTCAAGGTGTTTGATGATACCCTCTCGGTAAAGCTCCTCATAAACCTTTCTGATTTGCTGCCTCTGATGAACAC TCCTATGGCCCAATATTGCTCTCACAGTCTTCTCATCAGCCCCACATCCTGCACAATACAAAACCACTGAATCTTAAGTA CTATATCACATTCTACCTTGAACTCGTTTCGATACAAACCAAAAAGCACTTATCAGAGCTTATCTAATGCTTTTTCTAGT AGATAAGCTCCAATAACTCCGGATCCAAATAGGGTCTTTGGCACATCAAGCACAATACAAAATCACTAAATTCTAAGTAC TATATCACATTTTACTCTGTCAAAATGCATCATTTTGAGCAACAATTCATTTTTTATAAAAACACTTTCCATGTAAAGAA AATCACTTCTCTAAAATCGAAACAGAATACCTTTTAAACAAATTGATGGAAATAGCAACGAAAGGCACACGAATTACTTT GCCTGTGAGCTCCAACCGTGGTTGTGTATTGTATGTACTAGCTCCTCTGCAACTTTTGGATTCGAAAAAATGGATTTCAG ATATAAGGCAAACCAAGTAAAGCAGTAGTTGAACCTTCAAGGTGGCGCTGAGGTTCAAATGGTGGCGCTAGGTCTCGCGG CGGTCGACGGGCAAACTCCACTACTGGTGCGAGGGTCGACGGTGTTCGCAGTGGTGGCTGAAGCTGCTTGCTTGAAGCGA CGACAACCGCATAGAAAAATAATATAATAAAAGTTTAGTGTTTTTAAAATTATAAATGATAGATCCAAGGGTAATAAACC AGCCTTGAAACTTGTCTATGCTAGGACGAGAACTAGAATGAGTAAGCAGTAGGTAATTCGAGGACTCAAGTGTAATAAGA ATAATTGTCAAGATTTGACGGTTGGAACTGTTAGAGCAGTTATGCCAGCTGGAACAGTTAGCAGTTAGTACTGTTAACAG AGTTAGGCTATAAATAGTAGTAGTAGCTTCATGAGGAAGTTATCTTCGAAATAGAGTTTGGGATCTGGTTGTGGAACCAG TGTGATCATTGGGATCACTTGTAAACCCTAATTCCTTGTTCTTTCCCAAATTGTCAATTCAATCTTCTCCCTAGGCTAGG ATCATTTTGGTTCTGGAATAGGAATCCTCTTCGGTTTCTATTCAATTTTACTTGTTCATACTCACGAGTGTTACCAATAA AAAAGAGAATGATGAAATTTTATTAAAATGGTAACCATAAAAAATGAGAATAACCTCAAGTAGCTTATGAAAAAAGCTAT AAGCTACCAAAAATAAGCTTTTTTACCAAATACTTTAGAAGAGTTTTTAAGCTAGTTAAATTGTCAAATACACTTTAAGC AGTAAGCTTTAAGTTAGTCAAATAAACTTTAAGGTGGCTGAAAAATCTTTTCGCTTAACTAGTGAGTCCCATTGTCTTCT TTCTAATTTAGAATCTTTGAAGAATGTATACATTTGATTTGTGACTTGAGAGCAGTGTCATTAAACTCGACCCGGTCATC AACTCAGTGGAGATACTAGGTAAATGATGGATGGCTACCTTATTCACCATGATGGATGGCTACCTTGGGAAGGAAACTTT GCACTCAACACATTATATTACGCTGAGTACAACAACAAAGGGCTTGGTGCCAGCACTAATGCCAGGGTCAATTGGCCTGG CCGCAAAGCATAGTTATCGATCGCGGCAAATCGCGGCGCTATCGCGCCGTCGCGTCGCGGCCGCTCGCCGCGATTCTGAA GCCATCGCGTCGCGGAACGCCGTCGCGGCTGTCGCGCCGCAAATCGCAGCCAGATCGCGTGAGATCACGGCGCCACAAGA AGAAGATAAGGTACAGTTGTGGAAAAACCTAAATTGCCCTTGAAATTTTATAATTAGGTTAAACTTTGAGGGCAATTTTG GGATTTCGCACATAAATAAATGAACGCGCGTTTCATCTCTCACTATTCATCTTCTTCTTCAGCTTCTTCTTCAGCGACAG AACCCATGGCCACTGCGATCTTCTTCAGCCACCTTCCACCTTCGATCAGCACCCATGGCCACCGCCGACCTCCGACAAGC ACCGTCCAACTTCCAACGAACGCTGTGAGGTGACTTTCAGCCAATCTCCGGCGACCACTGCCCTAGGGCCTCTGTTCTGC TCTGTTTTTTTTTGTTTTTCTTTCCTTTCTTTTCCTCTTAATTTTCTATTCTCAATCAATTCATTTTGTTACCAATTCTC TCGCATGGCATCCTCTTCCTCCTCTCTTCTCTATCATCTCATCTGTTTGTTCTAGATTTTAAGTTATACTTATCTTTTTT TTAGTTATTATATGTATATACTATTATTCTATTAATTATATAAAATTATATATGAAAAATCAAAATAGCGGCCATCCCGC TATGCGCTATCCCGCTATCCCACTTTTGGGGTCGGCCGCTACGCGCCGCTATCCGGGATTGACTAAAGTCATTAACATGG AGCAATGGCGCAGGTGTACCAGCTCAGCTGGGCTTGTACAAGTGAAGGGTGTAATGCATGTAGCATTTTAATGAATACTA ATTGGGTTGAATGCTTGAGTCATTAATTCATATCTATTCTGAAACTTTTAACGGCATTAATTTGACAATTAACTATCATC TAAATAGTTTTAAATAAATTATTTAAGCTCGCTTCCCATAAACTTGCGCAAATTAAGGAAAAACTATTAACTGTCATCAA ATTACTATGTTTACTAAAAAGTTAATAATGTGATAATACATGGTTGAGTGACTTGCCTGGCAAAGGTGGCCAGTGGTATT AGTAGCTATATCTTCTAACGAACCTTTGTAAGGGTTGTGACTTGTGATAAGCATGCCTCACTGCCAAAACCTCTTCAAGT GAAGAGTACAAGGAATTTCAACAATCACATGGTAACCTTTGCTGCCACCACTCTTGAGGTTACATTGGCCACAACTTCAT CATGGTCAGTAGGTTCCAGTATCCAGTTGGTAAACAGCTTTCTGTTGGCAAAATCATGACTCCTGAAGCTAAGATAAAAC TATATGACATTGTTGGCAAAATCATGTTCTGGTCGTACTGAAAGCCACCAGAGAGCTCAGGCTCAAGAAGTTTGATGATA TCCTCTTGGTAAAGCTCCGCATAAACATTTCTGATTTGCTGCCTCTGATGAACACTTCTATGGCCCAATACTGCTATTAC AGTCTTCGCATCAGTCTCCATC
CDS sequence (LotjaGi6g1v0219300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATTTCAGGATTTTGATGTCATTTCAGAACGGCGAAAGAATGAAGAGAAGATGAAAATGAGAAAGAAGATTATCAT CATTGGAATTTCCTCCATTCTCCTTGCATGTGTGGTAGCTGCTGCAGCATTTGTTGTTGTCAAAAGAACTGGCCCTGACA GCAACAACAAAGTGAATGCTCCCTCAGCACCTGCGAACGCCCAACAAGTCGATCAATATTCAAGGCTTGTGAAAATGATA TGCAGCTCAGCACAATACAAGAGCAAATGTGAAAGCACCCTTACTGAGGCATTGAAGAAGGACCCTAGACATGCAAAGCC AAAGGATCTTCTCTTGATTTCCATGGTGCTTGCTGAGGCTGAGATTAACAAGGCCTTCAACAAAACCGCCACCTTGAAGT TTGCTTCTGAGGAGGAGAAAGGAGCATATGAAGATTGCAAGCAGCTCTTTGAGGATGCCAAGGAAGAAATGGGATTCTCT ATCACTGAAGTTGGATCAAATGATTTGGCTAAGCTTTCCGAGAAATCTTCTGAACTTAACAACTGGCTCAGTGCAGTCAT ATCTTACCAACAGACCTGCATTGATGGGTTTCCAGAAGGAAAATTGAAGACTGAATTTGAGAAGCTCTTTAAGGAATCTC GGGAACTTATTAGCAATTCCCTTTCTGTTGTGTCAGAGGTGTCTACATTCTTTTCTGCATTCGATGGAGCTTCAGGGTTT CACTTACCATGGGGAAAAACTGATGCCCCTCTAGCTCCTGCTCATGCTCCTGGTTCTGGCATTGTTCCTGCTCCTGGTCC TGCTCCTGGTCCTGGTTCAGCTGCTCCTGGCCCATCTCCTGTTTATGCTCCTGGACCTGCTCCAATTTTGGCTCCTGGTC CTGGTCCTGCTTGGCTTAGCCTTCCAGAGTTGAAGGGAACAGATGAGAAACCCATACCTAATGTCACGGTGGCAAAAGAT GGCAGTGGAAACTTCAAAACCATCTCTGAAGCTTTGGCAGCAATCCCACCAACCTACGAAGGAAGGTACGTGGTTTATGT TAAAGAAGGAATATATGATGAAACAGTGACGGTGACAAAGAAAATGGTAAATGTAACCATGTATGGTGATGGATCTCAAA AGAGCATCATCACTGGGAGCAAAAATTTTGTGGATGGAGTCAGGACTTTCCAAACTGCCACATTTGTGGTACTTGGAGAA GGGTTCTTGGGCAGAGAAATGGGATTCAGAAACACTGCTGGAGCAGAAAAACACCAAGCTGTGGCTGCCAGAGTACAAGC AGATCGTGCAGTGTTTGTAAAATGTGCCTTTGAGGGATACCAAGACACTCTATACGCCCAAACCCACAGACAGTTCTACC GTGATTGTGTCATTGCCGGCACAATTGACTTCATCTTTGGTGATGCAACTGCAGTGTTCCAGAACTGCACTATGGTTGTT AGAAAACCACTGGACAACCAGCAGAACATTGTCACTGCTCAAGGGAGACTTGAAAAGCAAGAAAACACAGGCTTTGTTCT CCAAAACTGTGTGATCAAGGCTGATGAACAACTTGTTCCAGTGAAGGGTAAGATCAGGAACTACCTTGGGAGGCCATGGA AGGAGTACTCAAGAACCATCATCATCGAATCAGAAATTGGGGACCTTATCCACCCTGATGGGTGGCTACCTTGGGAAGGA AACTTTGCACTCAGCACATTATATTATGCTGAATATAACAACAAAGGACCTGGTGCCAGCACTAATGCCAGGGTCAATTG GCCTGGCCGCCATGTCATTAACCGGGATGAGGCTGGCCAGTTTACAGTGGAGACTTTCTTGCAAGGGACATGGATCAATG GCACAGGTGTACCAGCTCAGCTGGGCTTGTACAATTGA
Protein sequence (LotjaGi6g1v0219300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFQDFDVISERRKNEEKMKMRKKIIIIGISSILLACVVAAAAFVVVKRTGPDSNNKVNAPSAPANAQQVDQYSRLVKMI CSSAQYKSKCESTLTEALKKDPRHAKPKDLLLISMVLAEAEINKAFNKTATLKFASEEEKGAYEDCKQLFEDAKEEMGFS ITEVGSNDLAKLSEKSSELNNWLSAVISYQQTCIDGFPEGKLKTEFEKLFKESRELISNSLSVVSEVSTFFSAFDGASGF HLPWGKTDAPLAPAHAPGSGIVPAPGPAPGPGSAAPGPSPVYAPGPAPILAPGPGPAWLSLPELKGTDEKPIPNVTVAKD GSGNFKTISEALAAIPPTYEGRYVVYVKEGIYDETVTVTKKMVNVTMYGDGSQKSIITGSKNFVDGVRTFQTATFVVLGE GFLGREMGFRNTAGAEKHQAVAARVQADRAVFVKCAFEGYQDTLYAQTHRQFYRDCVIAGTIDFIFGDATAVFQNCTMVV RKPLDNQQNIVTAQGRLEKQENTGFVLQNCVIKADEQLVPVKGKIRNYLGRPWKEYSRTIIIESEIGDLIHPDGWLPWEG NFALSTLYYAEYNNKGPGASTNARVNWPGRHVINRDEAGQFTVETFLQGTWINGTGVPAQLGLYN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| PANTHER | 13 | 244 | 232 | 5.8E-259 | – | |
| PANTHER | 13 | 244 | 232 | 5.8E-259 | – | |
| TMHMM | 25 | 47 | 23 | - | – | |
| Phobius | 25 | 47 | 23 | - | – | |
| Phobius | 48 | 625 | 578 | - | – | |
| TIGRFAM | 70 | 225 | 156 | 4.9E-18 | ||
| SMART | 72 | 223 | 152 | 8.1E-34 | ||
| Gene3D | 73 | 228 | 156 | 4.2E-18 | ||
| SUPERFAMILY | 75 | 225 | 151 | 1.7E-24 | ||
| Pfam | 76 | 222 | 147 | 2.0E-22 | ||
| CDD | 80 | 229 | 150 | 8.11604E-35 | – | |
| MobiDBLite | 253 | 287 | 35 | - | – | |
| MobiDBLite | 260 | 287 | 28 | - | – | |
| PANTHER | 289 | 624 | 336 | 5.8E-259 | – | |
| PANTHER | 289 | 624 | 336 | 5.8E-259 | – | |
| Gene3D | 309 | 623 | 315 | 6.8E-126 | ||
| SUPERFAMILY | 314 | 618 | 305 | 2.95E-104 | ||
| Pfam | 314 | 609 | 296 | 2.5E-141 | ||
| ProSitePatterns | 458 | 467 | 10 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. | ||
| Molecular function | Pectinesterase activity | Catalysis of the reaction: pectin + n H2O = n methanol + pectate. | ||
| Biological process | Cell wall modification | The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly. |
Expression pattern of LotjaGi6g1v0219300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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