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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0219700 |
| Transcript ID | LotjaGi6g1v0219700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pectinesterase; TAIR: AT3G43270.1 Plant invertase/pectin methylesterase inhibitor superfamily; Swiss-Prot: sp|Q43062|PME_PRUPE Pectinesterase/pectinesterase inhibitor PPE8B; TrEMBL-Plants: tr|I1L1X0|I1L1X0_SOYBN Pectinesterase; Found in the gene: LotjaGi6g1v0219700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:52300399..52307561) extracted from Lotus japonicus Gifu genome v1.2.
CAGTACTACTTCCAAGTTGCAACCCTCTTAAATTCGAATTAATCAAACACATCTTCAGACAGACTTTCATAACAATCCGC ACCATAAATTATTCTGGAAAAAAAGTATTCTTGAAATTTAATTCCCTTACCTGCCCAACTAACCAAAACATGCTTAAATT TAATTCCCTTCTTCCCCTTTGGCCCTTTAAATATGTAAAGCAATGCAAGTCACCTCCAAGTGTTCAACTTACTGAGCTGT ACTATACTTTCTTCTTCTTCTTCTTACAATGGCTCTTTCTTCAACTAAACAGTTAAGTCAAACACTAATGGGAATACCCA TTATCACATTCATCTTCTTGTTTCTAGGACTGCATGCTGCTGCTCCCACTAACTTCGTTGGATCAGAGTCCCTGAAGGTT TCTCCTCCTGAATTTGCCGGGTCAGTGAGAGATATAGTTGACATCCTTCATGAAGTCACCTCCATTCTCTCCGAATTCGG CGGGGGCACCGGCTTTGGCGATTCTCGTGTCTCTAACGCCATATCTGATTGCCTCGACTTGCTTGATCTCTCCTCTGATG CGCTTGACTGGTCCGTCTCCGCAACAGAGACTCCCAAAGGTACCAACCATTGCGCTAGCAACACTCTTTTTTCAACACTT TCTTTTTTCAACACTTGCATGTATTATTTAAATTCATGTGGGTCCCACTAAATTCGAGGTGCGACCCATATGTGTTGCTA CCATTTTTTCAAGTACTTAACTGCCAAAATCTAATCCAATTTCATCAGCATTTTCTGTTTTTTGTTTCTCTAGTAAAAGA CAAAAGTTAGAAACAGGGGATTTCAAATTTTCAACTCATATTTTGTTGTAGGGAAGAATAACAGTACTGGGAACCTAAGC TCTGATCTGAAGACATGGCTAAGTGCTGCATTGTCGAATCCAGACACATGCATGGATGGGTTTGAAGGAACAAATGGCAT GGTGAAGGGTCTAGTGTCTGTTGGCCTTGGCCAAATGATGTCGCTGCTGAAGCAACTCCTGACTCAGGTGAACCCTGGTT CGAATCACTTCAGCGCGACCGAGGGCCAAGGCCAATTTCCTCCATGGGTCAAACCAGGAGACAGGAAGCTGCTGCAGGCG GAAAATGGGGACCGTGTGGATGCTGTGGTGGCGGCTGATGGGAGCGGGAACTACACTACGGTAAAGGATGCGGTGTTGGC AGCACCTGATCATAGCTTGAAACGTTTTGTGATATATATAAAGAGGGGTGTTTACCATGAGAATGTTGAGATCAAGAAGA AGAAGTGGAACTTGATGATGATCGGAGATGGGATCAATGCTACTGTCATTTCCGGTAACCGGAGCTTCGTCGGCGGTTCG ACAACGTTCCGGTCAGCTACCTTTGGTGAGAACACACTTCTTAAACTACTATTGCAACTAACAATATTAGCTAGCTAATA CAAATATTAATGATAATCATAATAATAAGGCTCACATCCCCGGTTGTTTATCATAGTTATTGCACCGGTCTCAATGACTT TCCCTCCCTCTTATATTATTTAGAATAATAGAGAACATGGCATGTTATAATAATAAATTTTAGGAGAGGTGAATGTAAAT AAATTTCAAGAAGGTTAGTGCAATATTACTAATAAAATAAGGGTAGTTAATATCATATTAAACAATAAAATGAAGATCGG TGTAACAATAATAAACCTGAAAAAGATGAGCGTCCTTTGCTTTCATAAAATAAGAGTAGTGACTAATTGAAAGACTATAT ATTAGATACTACTATCTTGTTAAGCTATTTGAATACTTTTTTTAGTATAGTAAAAAAATACTTTTATAATGATTAATGGA TACAATGTTAACAAAAACAAAATGAAGTGCATCCATCTTATTATTTTTTGAAGTCAAAGTACATCCATATTCAAAACATG TAAAAAGTACTTTCTTCGTTTATTAGTCAAAGAATTATGAAGAGTATAGGTTTGAAACAAAATTCAAATTATGCATACCG TTGTAATCTTTTTCTTTTTTCAGAAAGCTACAAAATTGCTATAATCAAAGGTTTTTTCTTGGTCAAGATTATGATCAAAG GTAACGGTAATGAGAAACAATCCTTCTCATTAGATAAAAAATAACCCCTAACAAATAAGAATACCCTAGAGAGACAGCCA ACATCGCCTTCCAATCTGTTAAAAAAAAATTCTACTTCCAATAAAAATGTTTAATCTTTTATGTATTAATCATAATGAGA ATTTACTTTCAATTTAATAGGCTTAAATTAATTAATTTATGAATTTCATTCCTTTTTACTAATTTAGTCTTTAAACTATA CAAAGCTAATAAAAATGTTTTACTATATTTAGAAGATTATGTTAACAAGACAAGCAAACCTGTAGATAATAATAGTGATT CAACCTCGGGACTTGCAAGTATGCTGAATGCATATATAATGGTAAATAGTTAAGTTCCTTAATCATTTAATTTATTGTTC GATTATTGAGTGTTGTGTATAAAGAAAGATTTGTTAATATTGTCGTTGAGCCTCAAAATGAGTAGTCTCATTGTTGCCGG ATGCGATGATACATTTATAAAAAAAAAATACATATAATCCAAGAGAGAAAAGGAGATTAATTTGGCAGTAGAAGTAATTG AGAGTTTTCTCGAATAATGACAATAATGTGGTGAAATATGAAACCTGGAGTTCATTCCTAGGTTAGGTAATGTCTAATCC CCTATTATGTACATTTATAAGCAGGCATGACATGGTATACCCCAAACCCTGTCACATTTATTTCACTAAACTACTTGTGA GACCAAAAACTTCTTTTCAACATGATGAAATGAAAGCAACTAACTAGCAACTAATCCTCATCAGGAACATTCATGGAAGG CAAGTCCCTGAATGTTTTTTTTTTAAAAAAATTATTTTAAAATGTTATCCAAGACAACATAATCCATATCTCCAACCTAC TGATAATGAAAAATTAAATGATCATGTGCTGCAACTATAACATTTATAAGGCCTGAGAATCTGGTCTTTTTCAACAGCTG AAATCTCTGACCCCATTCTCATGTGTTTGCTTGCTTCATTTGAATATTTTTTCCTTCCTGTGTGGGGCATGTGCAGCTGT GAGTGGTAGGGGGTTCATAGCACGAGACATCACCTTCCAGAACACTGCAGGGCCAGAGAATCACCAGGCAGTGGCCCTAA GATCTGACTCTGACCTCTCTGTATTCTACCGATGTGGGATCTTCGGTTACCAAGACAGCCTCTATGCTCACACCATGCGT CAATTCTACCGGGAATGCAAGATCAGTGGCACCGTGGATTTCATCTTTGGAGATGCAACCGCGGTGTTCCAACATTGCCA AATACTCGTCAAGAAAGGCTTGCCAGATCAAAAGAACACCATCACAGCTCACGGTCGAAAAGACCCTGGGGAACCAACCG GTTTCTCCATACAATTCTCTAACATCTCGGCCGATTCAGACCTTCTCCTTTCAGCTAATCACTCCACCACCCACACGTAC CTCGGGAGACCGTGGAAGCAATATTCTAGAACAATTCTCATGCAGTCTTACATAAGTGATGTGTTAAGACCGGAAGGGTG GTTAGAGTGGAATGGGGATTTCGCTCTGGATACATTGTACTATGCTGAGTACATGAATCATGGGCCAGGAGCGGGCCTAG CCGACCGAGTTAAATGGCCGGGGTACCATGTGATGAATGATTCTAGACAAGCTAGTAACTTCACAGTGACACAATTTATT GAGGGGAATCTGTGGTTACCTTCCACAGGTGTAACTTTCACTGCTGGACTGGGAGTTTAAACCACTGTTGTCCATGTTGT TCTTGCTAATTCAAGTGGTTCTTTGGAGTTATGTGGTCCAAAAAATGATGGTGGTGGTTGGTGTTCAGTTTCATTCATTT TTGTACTTGACTATTTAAGAATTCTTTACTTTTGGTACCTGAGTTCTGTATTTCTCAATTTTGGATGAAATTTGTTGCAA TATTGCACTGGAAACATGGCTCCTTAATCAACCAGTTCCTGGCTGCTTGTAATCCAGATTGATTGTAAAAACATGTTTAT GAAGCTCAATTATGTTCAGTTCATGGCTAATTGGATGTAAGACTTAGCATGCTTTGATCTGACATAGACCAAACCAATAA TGAAATCTGATTTGTTTTTTCAAAATATGTCACATCTCACATCTATTTAGGCTTGCAATGAAAATATATATTTGGAATCA TATTCAAGACAATAAATAATAGTAAGACCTGTATTATATGGGAATGAGCACCATATACAAGCAAGTGACAATAACAAAGT TCATGCTATTTATTCACAAATTAAACATGAGATGCAGAGTAAGATACAACACACACTTCTCAATAAACAATACAATAATT CACCAATGATAATATAATTGCTTAGATAGTTATAGAAAATCCACAACTGAACTTTGAGCAAAAATATTACGCCAAGAGAT AATAGTTATCAGTCATGTTCAACAACAGTTACAATGATTACCAGCTTGTTTGGATGTTCGTTGAACGCACACTCCAAGAC ACCTTAGCTAAGAAAAGCTACGTACTGCAGCTTATGGATGAACTTGATTTTGGGGTCTAAAAGTGGATTGCAAATATCCA ATCAAACTAAGAAAAGCTACATACTGCTGCAGCTTATGGATGAACTTGATTTTGGGGTCTAAAAGTGGATTGCAAATGTG CAACCAAACATATCTTATGGTGGAACTATGGTGCTTCCACACCTTCACTTACCTTCTCTTTGAATGACTTAGTGTGGAGA TCTTGTGTTATTTGAGTGGTTGTATCTAAGAAGTACAGAGCAAATGATGTCAAGCAGCAACAAGCAAACACGGGTATGGG CCCATAAATCCAAAGGACAAGAGGAATTGACAAGTAGAATGCCTGCAAGCCAAGAGACCAAGCATAATTTGCACGGTTCA AGGTTTTCGCAACATATTCAATGAAATCCACTTTGCCTTTCAGTGCAGGACTTGTGATTAAGAAGCTCACCTGTGCATAG TATCTTATAGACTGCACATTACATAGAAATGCAACAAGGAAGCATACTGATATGCAAAGGCGTTTGATTGAAGAATTAAG GGAAGTTTTGTTTCTGTAAATTAATTTGGATTCTTCTGTGTCATTGCTCGCAAAGACGCCAATAAGTGAACTGAGTGTGA TTGCAGTTGTAGCAAGAAGAGTAGAAGCCATGATATTGTTGCGGATTGTTTGAACGGCCAAAACACCATTTTTCAAAGGG TCCTGAAGTGAAAACAAAGCAAGGGAGTATGTTAAGGAAACAACTTCATTCTTGAAAATGTAAAAAAATTGCTTCTAAAA TTGTGGGGTGTGGCAAGGTGATGCAAGTAAGACTATAAAGAAGAATGAATATCTACATTGGAATATCAACTAGTGAAGCA ATCTATAGTTGTCTTTAGAGTAGGTAAAGCACTTGTCAAATACATTTCATAAGCATTCAAATGTGATCAAGATCTTGTAG GGGCACAAAATATGAACCTTAAACTATGCAATAGCAAAGAACTATTAATACTAGCTAGCAAGCAGCAGTTCTTCATGGCA TTATAGAATGTTAAACAAATACCTCCAAAGTGAAAAGTGAAAAATTAAAAACAATTTCTCATACCAACAAACTTGAAGCT GTTTGAACAATTCAATGGTGAAAGACAGACAAAAGGAAATGAACATTGCACTTTTTATTCACAAGATTGTGGTAATTCTT CCTGAAAATAGATCCACTTATATTAGGATTTTTTAGGTGAAAATTATCTTGCTCTCTCTTGATAGGTTTTCACAAAGTTT GATTGGGGCCTGACAATTTAGTGTCTATGAAGTATGAGATAGGAACAATATTTTCAAAATCCATGTCATGTAAAATACTG CAAAGGAAGATTCATTCCCAATTTCACATTTCCCTGAAATAGCTTAAAGGACTCCTTCTGAAATTTCTTTAATTTGACTT AGCTCTGTTCCACCCTCTGCCTTGTGTCCAGGTACAGTATATATATCAGTAAAACAGTTATGTTTTTCTTATGTGGCAGG GCAGTTATGCTTTATAAATTTGCAATTACTATTTGGAATTATTAGGGTATATTTATCTAAGATAATCATGAGATTGGCAG GGTGGTTTTTTTGTCAGTTTAATGAAAGGAATAGATTACTTGTTAGTTGTTAGAGGGAAATTCTGAATAAACTCAAAAGT TAAGGTGAAACCTGTGTCTATTCCATTGTACTCAAACCTAGCCTAAAAACAACATGTTAGCCAGCATGAAGCACCATTGC ACCAACTTCAGCATAAAATCCCCAGCTACTACATATTTTGTGCAACTCTTGAGAGAACCTCATCTAGAATAGCAGGATAT AGGATTGAAGTTTAGAAAACCTCATGATTGTTGAATCCTTTGTTCACACAATGACTGAAATAGTATTCTAAATCTGAGAT CCTCAAATTCACCACTCCTCATTCACAGACAAAATTAAACATAAGATGCATTTTTTAACAACATTCTCAAGAGCTAATGG ATTTCTTAACAATACAAAGTCATTAAACAATTAAGGGCCTGCAAGAAGTAATGAACATCTTCAAGTAATACTAGAATGGA AAGAGAGAGAGAGAGTACTGACACTCATCAAGGCAAAAACCCATTGATAACGAGACTGAGCATTCAAGCCAATAACAGTG CGAGAAGGGTAACGGATAATAGTGTAGAGAAGCCAAACATGATAAATTCCCAACACCAACACTCCCAAAGGCACCAATAT GAAATCCAAGTACTTTACTTCCATGCTGCTTGTATTGATCTTCAAACTTGTAACTTCAAAATTCTACCATTCACCTCACT ATTGCAACCAACCACATATCTGACACTCACAACGGTTCTCTCCACTTCAAAAATGTCAAGTTGGCATATAAAAAATCAAA CTAGTTCCACCTACACCCCACTTATAAAAAACTTGCCTTCTTGTCTCCAAAACAAGTAAAAATGCTATTGCTTGCTGTTA GAAATTAATAAAGCACTTCAACAATGGTAGCTGAAATTGGATCTGTGCAGCAATGTTTTTTTTTGTTGGTACCTTTCTCC AATCTTAAGTTTTGTTATTTTGTTGTTTCCTTTCACTATAGAG
CDS sequence (LotjaGi6g1v0219700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCTTTCTTCAACTAAACAGTTAAGTCAAACACTAATGGGAATACCCATTATCACATTCATCTTCTTGTTTCTAGG ACTGCATGCTGCTGCTCCCACTAACTTCGTTGGATCAGAGTCCCTGAAGGTTTCTCCTCCTGAATTTGCCGGGTCAGTGA GAGATATAGTTGACATCCTTCATGAAGTCACCTCCATTCTCTCCGAATTCGGCGGGGGCACCGGCTTTGGCGATTCTCGT GTCTCTAACGCCATATCTGATTGCCTCGACTTGCTTGATCTCTCCTCTGATGCGCTTGACTGGTCCGTCTCCGCAACAGA GACTCCCAAAGGGAAGAATAACAGTACTGGGAACCTAAGCTCTGATCTGAAGACATGGCTAAGTGCTGCATTGTCGAATC CAGACACATGCATGGATGGGTTTGAAGGAACAAATGGCATGGTGAAGGGTCTAGTGTCTGTTGGCCTTGGCCAAATGATG TCGCTGCTGAAGCAACTCCTGACTCAGGTGAACCCTGGTTCGAATCACTTCAGCGCGACCGAGGGCCAAGGCCAATTTCC TCCATGGGTCAAACCAGGAGACAGGAAGCTGCTGCAGGCGGAAAATGGGGACCGTGTGGATGCTGTGGTGGCGGCTGATG GGAGCGGGAACTACACTACGGTAAAGGATGCGGTGTTGGCAGCACCTGATCATAGCTTGAAACGTTTTGTGATATATATA AAGAGGGGTGTTTACCATGAGAATGTTGAGATCAAGAAGAAGAAGTGGAACTTGATGATGATCGGAGATGGGATCAATGC TACTGTCATTTCCGGTAACCGGAGCTTCGTCGGCGGTTCGACAACGTTCCGGTCAGCTACCTTTGCTGTGAGTGGTAGGG GGTTCATAGCACGAGACATCACCTTCCAGAACACTGCAGGGCCAGAGAATCACCAGGCAGTGGCCCTAAGATCTGACTCT GACCTCTCTGTATTCTACCGATGTGGGATCTTCGGTTACCAAGACAGCCTCTATGCTCACACCATGCGTCAATTCTACCG GGAATGCAAGATCAGTGGCACCGTGGATTTCATCTTTGGAGATGCAACCGCGGTGTTCCAACATTGCCAAATACTCGTCA AGAAAGGCTTGCCAGATCAAAAGAACACCATCACAGCTCACGGTCGAAAAGACCCTGGGGAACCAACCGGTTTCTCCATA CAATTCTCTAACATCTCGGCCGATTCAGACCTTCTCCTTTCAGCTAATCACTCCACCACCCACACGTACCTCGGGAGACC GTGGAAGCAATATTCTAGAACAATTCTCATGCAGTCTTACATAAGTGATGTGTTAAGACCGGAAGGGTGGTTAGAGTGGA ATGGGGATTTCGCTCTGGATACATTGTACTATGCTGAGTACATGAATCATGGGCCAGGAGCGGGCCTAGCCGACCGAGTT AAATGGCCGGGGTACCATGTGATGAATGATTCTAGACAAGCTAGTAACTTCACAGTGACACAATTTATTGAGGGGAATCT GTGGTTACCTTCCACAGGTGTAACTTTCACTGCTGGACTGGGAGTTTAA
Protein sequence (LotjaGi6g1v0219700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALSSTKQLSQTLMGIPIITFIFLFLGLHAAAPTNFVGSESLKVSPPEFAGSVRDIVDILHEVTSILSEFGGGTGFGDSR VSNAISDCLDLLDLSSDALDWSVSATETPKGKNNSTGNLSSDLKTWLSAALSNPDTCMDGFEGTNGMVKGLVSVGLGQMM SLLKQLLTQVNPGSNHFSATEGQGQFPPWVKPGDRKLLQAENGDRVDAVVAADGSGNYTTVKDAVLAAPDHSLKRFVIYI KRGVYHENVEIKKKKWNLMMIGDGINATVISGNRSFVGGSTTFRSATFAVSGRGFIARDITFQNTAGPENHQAVALRSDS DLSVFYRCGIFGYQDSLYAHTMRQFYRECKISGTVDFIFGDATAVFQHCQILVKKGLPDQKNTITAHGRKDPGEPTGFSI QFSNISADSDLLLSANHSTTHTYLGRPWKQYSRTILMQSYISDVLRPEGWLEWNGDFALDTLYYAEYMNHGPGAGLADRV KWPGYHVMNDSRQASNFTVTQFIEGNLWLPSTGVTFTAGLGV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 32 | 21 | - | – | |
| TMHMM | 13 | 32 | 20 | - | – | |
| CDD | 18 | 174 | 157 | 7.6476E-39 | – | |
| PANTHER | 30 | 520 | 491 | 2.7E-231 | – | |
| PANTHER | 30 | 520 | 491 | 2.7E-231 | – | |
| SMART | 32 | 158 | 127 | 1.2E-9 | ||
| Phobius | 33 | 522 | 490 | - | – | |
| Gene3D | 56 | 167 | 112 | 8.2E-7 | ||
| SUPERFAMILY | 68 | 156 | 89 | 1.44E-14 | ||
| Pfam | 83 | 161 | 79 | 1.3E-14 | ||
| Gene3D | 205 | 521 | 317 | 2.6E-130 | ||
| SUPERFAMILY | 207 | 519 | 313 | 4.52E-113 | ||
| Pfam | 207 | 506 | 300 | 1.7E-147 | ||
| ProSitePatterns | 351 | 360 | 10 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. | ||
| Molecular function | Pectinesterase activity | Catalysis of the reaction: pectin + n H2O = n methanol + pectate. | ||
| Biological process | Cell wall modification | The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly. |
Expression pattern of LotjaGi6g1v0219700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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