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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0224500 |
Transcript ID | LotjaGi6g1v0224500.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase-like protein; TAIR: AT2G05940.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9ZUF4|RIPK_ARATH Serine/threonine-protein kinase RIPK; TrEMBL-Plants: tr|A0A151RWJ0|A0A151RWJ0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0224500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:52956111..52958711) extracted from Lotus japonicus Gifu genome v1.2.
TTCTCTACCTTCACTTTTGAAAGTCTTAAACCCATTTTCATTTCCTCGAACCTCTCTCTCTCTCTCTTCCTACCTAATAC CTACATAGTCTCACCAAGTTTTCCAAGCTTTCTCAAGTATATATATATTAATACAAGGACCATAGCTGCAAAACCAGAAC AAGTTTGGATTTGTTTCAACAATGGCAATCATGAAAGTTATATGGAAAGCGATCTTCCCAGGTTGTTACAAGGGTGGTTA TCCCTCAACCAAGCCCAAGAAAGTGGTGGCCACAAAGCCACCAAGTTCATCTCACAGCAGGATTTCTGTAACTGATTTGA GCAACCCTGGAAGCACCACTTTTACAGAGGATCTCTCAATTTCTCTAGCAGGAACTAACATTCATGCTTTCACTGTGGCT GAGCTCAAAGTTATCACACAGCACTTTTCTTCTAGCAATTTCCTAGGAGAAGGTGGATTTGGACCAGTGCATAAGGGTTT CATTGATGACAAGCTTAGGCCTGGTCTCATCAAGGCTCAACCAGTTGCTGTAAAGCTCTTGGACTTGGATGGCAAACAAG GCCATAAAGAGTGGCTGGTACTTACTTTTTCCAATGATTCTCTTAATGGAACTTTTTTTTTTTGGTAATGAGAGCCTTTG AATTCTAACTCTCTTTTGATTTTTCTTGTGTGAACAGGCTGAAGTTGTTTTTCTGGGGCAATTCAGGCATCCACACCTTG TGAAGCTAATTGGATACTGCATTGAAGATGAACACAGGCTTCTAGTGTATGAGTATTTGCCAAGAGGGAGCTTAGAGAAT CAATTATTTAGAAGTAAGAATTCTGTTATAATAATAGTAATCAATGATTAATTGTGTTTTACCAATCTGCTTAATTGGAA CATGAATTAAAACTGATCACCTTTTTGTTGGAATTCCAGGATACTCAGCATCTCTGCCTTGGTCAACAAGAATGAAAATT GCTGTTGGAGCTGCAAAGGGTCTAGCTTTTCTTCATGATGCAGAGAAACCAGTCATCTACAGAGATTTCAAAGCTTCCAA CATCTTGTTAGACTCTGTATGTATCTGATCTCACCTTCCTCCTCTACTGTTCCATTCAAAATTAAAAACATCATTCATTT AAGGAAAATTATTCGCGTGAGAAGTAATGAATGTGATATATAACCTGACGTGTTGTGGGGTGTCTAACATGTTTAAATAT GTGTAATTAACTTACTACTTATACTGACTTTTTCTCATTTGTTGTTGTTCTTCCAGGATTTCAATGCAAAACTATCAGAT TTTGGGTTGGCAAAAGATGGTCCAGAAGGAGATGACACCCACGTTTCAACCAGGGTCATGGGCACCCAAGGCTATTGTGC CCCAGAATATGTCATGACAGGTAAATTCAATCTTTCTAAATCTCTGATTATACTAACAATCTCAACAACCACAGAAAATG ATTTAACAAAAAATCATTGCAACTAGATCACTTTAACCAATCTTTAATATTTTTTCTTCTCACAGGTCATTTGACAGCAA TGAGTGACGTGTATAGCTTCGGAGTAGTGCTGTTGGAGCTGTTAACAGGAAGAAGGTCAGTGGACAAGAACCGTCCTGCA AGGGAGCAGAACCTTGTGGATTGGGCAAGGCCCATGTTGCATGATTCAAGGAAGCTTAGCAGGATCATGGACCCTAGGCT TGAAGGGCAATACTCTGAGATGGGAGCTAAAAAAGCAGCAGCACTGGCTTATGACTGCCTCAGCCATAGGCCCAAGAGTA GGCCCACAATGAGCACAGTGGTTAAGGCTCTTGAACCCCTTCAGGATTTTGATGACATTCCAATGGGACCCTTTGTGTAC ACAGTTCCAGCTGATAAAAGTGAAGTGCTTAAAGAAGGGAAGGATTTTGAATCACCTAGGGACAGGAAGAGGAGTCCCCA TCCAAACAGAGGACATAGGCCTCATCCACTTAAATCCCCAAAGTCATCACCAAAGCCATCACCAAGGCCATCACCAAGGC CACAGTCACAAACTGATAGACATAGAAATGGGAGAGGAAGTGGATCAAATTCTCCTCCTGATCATCAGAAAGGCAAGGAA AGGTAGAACATGTTTGGAAATCTTTCTGTAATTGATTCGAAAGTCAAGATCAATGCAGGGGAGAAACTTCGCTGAATAGC TTCTAAGTGTACCAGAATTGATTATGAGGAAAAGAACGGCTGCTGATAAGTTTGATAGGACACATACATAGTACTGTACA TAGATATTTGCTATAAAATGCATGGTTTTTTTATTTAGTGTACCAACTACTAGCTAGCCTAGGTGAGTGGAATGAGGCTT GAGCCATCAAGCAAAAGGAAAAAACAGACAGAGACAAAAGAAAAAGGAGGGTAGGCGTGCAAGTGTGATGGTCCTCTTTT GTTTTATTTTTGTTTTTGGATACTCTTCAATTGAAGAAGGAGGTTAATTTTTAGTATAATTTGTGTATACATACGATTAT AGATTTTGCTTGTTGATGAATTACAATTAGTGGCAATTACCGGCTATGATTTGATACTCTTCAATGAAGGGAGATAGTCA GTGATTATAATTTTTGTATAGTGTATACACACGATTGTAGA
CDS sequence (LotjaGi6g1v0224500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAATCATGAAAGTTATATGGAAAGCGATCTTCCCAGGTTGTTACAAGGGTGGTTATCCCTCAACCAAGCCCAAGAA AGTGGTGGCCACAAAGCCACCAAGTTCATCTCACAGCAGGATTTCTGTAACTGATTTGAGCAACCCTGGAAGCACCACTT TTACAGAGGATCTCTCAATTTCTCTAGCAGGAACTAACATTCATGCTTTCACTGTGGCTGAGCTCAAAGTTATCACACAG CACTTTTCTTCTAGCAATTTCCTAGGAGAAGGTGGATTTGGACCAGTGCATAAGGGTTTCATTGATGACAAGCTTAGGCC TGGTCTCATCAAGGCTCAACCAGTTGCTGTAAAGCTCTTGGACTTGGATGGCAAACAAGGCCATAAAGAGTGGCTGGCTG AAGTTGTTTTTCTGGGGCAATTCAGGCATCCACACCTTGTGAAGCTAATTGGATACTGCATTGAAGATGAACACAGGCTT CTAGTGTATGAGTATTTGCCAAGAGGGAGCTTAGAGAATCAATTATTTAGAAGATACTCAGCATCTCTGCCTTGGTCAAC AAGAATGAAAATTGCTGTTGGAGCTGCAAAGGGTCTAGCTTTTCTTCATGATGCAGAGAAACCAGTCATCTACAGAGATT TCAAAGCTTCCAACATCTTGTTAGACTCTGATTTCAATGCAAAACTATCAGATTTTGGGTTGGCAAAAGATGGTCCAGAA GGAGATGACACCCACGTTTCAACCAGGGTCATGGGCACCCAAGGCTATTGTGCCCCAGAATATGTCATGACAGGTAAATT CAATCTTTCTAAATCTCTGATTATACTAACAATCTCAACAACCACAGAAAATGATTTAACAAAAAATCATTGCAACTAG
Protein sequence (LotjaGi6g1v0224500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAIMKVIWKAIFPGCYKGGYPSTKPKKVVATKPPSSSHSRISVTDLSNPGSTTFTEDLSISLAGTNIHAFTVAELKVITQ HFSSSNFLGEGGFGPVHKGFIDDKLRPGLIKAQPVAVKLLDLDGKQGHKEWLAEVVFLGQFRHPHLVKLIGYCIEDEHRL LVYEYLPRGSLENQLFRRYSASLPWSTRMKIAVGAAKGLAFLHDAEKPVIYRDFKASNILLDSDFNAKLSDFGLAKDGPE GDDTHVSTRVMGTQGYCAPEYVMTGKFNLSKSLIILTISTTTENDLTKNHCN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 6 | 268 | 263 | 1.8E-156 | – | |
PANTHER | 6 | 268 | 263 | 1.8E-156 | – | |
Gene3D | 43 | 165 | 123 | 1.4E-31 | – | |
SUPERFAMILY | 67 | 268 | 202 | 5.26E-60 | ||
ProSiteProfiles | 82 | 292 | 211 | 30.139 | ||
Pfam | 86 | 268 | 183 | 3.9E-34 | ||
Gene3D | 166 | 272 | 107 | 4.2E-31 | – | |
ProSitePatterns | 209 | 221 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0224500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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