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LotjaGi6g1v0245200.1

Overview

Field Value
Gene ID LotjaGi6g1v0245200
Transcript ID LotjaGi6g1v0245200.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Protein N-methyltransferase; TAIR: AT4G20130.1 plastid transcriptionally active 14; Swiss-Prot: sp|Q84JF5|PTA14_ARATH Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14; TrEMBL-Plants: tr|A0A0R0I3Y4|A0A0R0I3Y4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0245200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:55757861..55763256) extracted from Lotus japonicus Gifu genome v1.2.

CACCTTAATACCAAACCATGGGGTACACCCTCCATTTTTGTGGACACCTCACTCTTCAAACTTAACTAAAGCCTTGTTGG AGGAAGAAACCCAACCCAATTCTCCCTGGATAACGTTGTTGTCGAGTTTCCACTCTGTTGTTGTGTTCTCTCTGTTCTTT TGTCACTTGGATAGTAGACATGGTTTAACTTAGCGCTTCTTTCCATTTTCAATATCCAATGGCTTCTTCTTCCTTTCATC TTTATCAGCCTACACACTGCTTCTTCTCCAACACCCAGGTTCAAATCTCTTCCCGTTCTTCCATCCTATGCTATGCCTTT GAATTTCTTCCCTAACGTTTTTGTTTGCTTTGTGAACAGTTCACAGGTCTGCGCCATGGCTTCTTCTGCCGACCCACTTA CTCTCATGCTCAAAACAAAGTGCAACCCATCAAAGCTTCCGTTGCTGCACCCCCATTTCCATTGTTTCAGCCTCCCAAAG TTGAAGAACCAACGTCTGAGGTGAACCCCATTTTTGTTGTTGTTGTTGTTCATAGTTTGGAAGTTACAACTAGGACCATA ACCTGTTAAATTAGTTTATAAGTAGAAAATATTGATTGAGTAGAGTGAGTTAGTGAGTGTTGTTTCTATAGTTTGATGTG CTTTTAGCAGATAGAGTACCATAAAGATTGAGATTCAGTGTCTTATTTCATGAATTCTTAAACTTTATGGGGTTTCTGTT TTGACGAGGGTTGTGATTTTTCTTACATTTTTTTGTTGATTTTTTTGTTTCTCAAGTTGGAGCCTGCAGACCCTGACTTC TATAGGATCGGTTATGTTCGGAGCATGCGAGCTTACGGGATTGATTTTAAGGAAGGGCCAGATGGTTTTGGTGTGTATGC TTCCAAAGATGTAGAACCTCTTCGCCGGCCTAGGGTGAGTAGCTTCATTTAAGACTTTTGCAATTGATGGCACTATACTT ACAATCTACCTGATATAAATAAAGCCTTTGTGACTGCTGGCTGTGGCACATGAATAGATAATTGCACACATAGTACATAG CTAGTTATTTGCATAATGTCCTTTATTAGGAGTTGTTGATGGCTGTTTTTCCTAATGATGTACTTGGACAGGTTATAATG GAAATTCCTCTTGAATTGATGCTAACCATAAGCAAGAAGCTACCGTGGATGTTTTTCCCTGATATAATTCCCATTGGTCA TCCAATATTTGATATTATCAACTCGACAAATCCAGAGGTAATTGGAATTCTCCTCTAAAGCCATTAGTTCATAATAAGAT ATAATTGATATGCTTGATTTTTTTTTTCATGATAAATACACAAGTTATCAAATTGTCACCCCTTGTTGTAACAGTAGTAT GTACTCAAAAAGTAAACAGCCCTTTTATAGTCATCTGCCTAATGTAATTGTGTTAATATTTGTGGCAGACAGATTTGGAC TTAAGGTTAGCATGCCTCCTCTTATATTCATTTGACTGCCAAGAAAACTTTTGGCAGTTATATGGTGACTTCTTACCAAG CGCAGATGAGAGCACTAGCTTACTTCTAGCTACAGAGGTGCGTAATAATTTTCAGTTGAGCCACAAAATTCATATGAGCT CTCTTAAGTTGGCTTGGAATCCTTTGTAATATTAAGGAAGGGCATTATGCAATCCTTTTTGCAATTACTGTAATTTTTTG GAAACGACTTTGTGACATATGGTGTTGATTTGTATATCCAGGAGGAACTTTTGGAGCTGCAGGATCCTAATCTTGCTTCT ACTATGAGAAGTCAGCAACAACGAGCATTAGAATTCTGGGAGAAAAACTGGGTAAAAAGCAAAGTGTTCTCGTTGAATTT GTTAGCTTTCCATTATGTTACTAACAAATTGTGTTAATCTTGTCAGCATAGTGGTGCACCCCTTAAAATAAAGCGTCTTG CTCGTGATCCTCAGAGGTTCATTTGGGCAGTAGGTATTGCACAATCACGATGTATTAATATGCAAATGAGAGTTGGTGCG TTAACTCAAAACGCAAACATGCTGGTTCCTTATGCCGGTAAGCTAAATTTACCTTAGATCGTCTGATTAAACATGATAAC TTTGTTGTACTATTAATATAATAAAAAATATATTTTACCTTCAATTTTCACCTTAGCTCTATATTTTACTATCATGTCCT TTACATATTTGAGGTGTTCGTTAATATTAAAACTTGATGACAAGTACCACAAAATTATGCATGGAATAGATATTTTCTGC TCTACAAAAAGAAAAATCGAAATCTTTGAGCAGAAGGGCAAAATGTTTGCAAGATGTTACACACCCTTCTCATGGGGGAT TTTTTTATGTTACACACACTTCTCATCGTAGTACTACTTATTTTCTCCACTTCAAATGTATAGTTGTTTTTTTAAGTTGA CAGATTAACTTAGTCTTACTTTTCAGATATGCTGAACCATTCATTTGAGCCAAATTGTTTTTTTCATTGGCGTTTTAAGG ACCGGATGCTTGAAGTTCTTATAAATGCTGGGAGGCGGATTAAAAAGGGAGATGAGGTAAATCATTTGATTCTCCTAAAG CTAAGACAAAACACCAAAAATAACAAGAAAAAAAGGACAATTTTTTTTAGCTCTAGAAGGCTCTAAGTAATGGAATGAGA TGGGGAATAGAGTGGAACAGAACAGAATAGAAGAAGTTACTATTCTGTTGTTTGAATATTATTGTGATCTAATGGGGAAG AAATCTGGTTCCTTCCCATGCACCCTGAGATGGAGGGTAGAAAAGGTGGGGTGTTGGATGGGATGGAATTGAATTGAATG CATTCCACCATGTTCTAGTCCACATCCATCCTATTTTAAATCAGCCAAGCAATGGAACTTAATGTCATTCCATTCCATCC ATTTCTATCAATCCAAACATAGCTTAAAGAAAAGGCAATGTTAACTCAAGAAGGATGTTAAATTTATTGCATATTTGCTA AAGAAACCCCCTACACAACCCATACAAATAAGAATCTATGGCTAAAAATTCTCATGTTATTTATACTATAGATATATTCG TCTAAAACCAGCAAAGAGAGCATAGGTCCACAAGTCCTCTAAATTGTTACTGCTCTGCTGAAACCTCTAAATTGAATGAG GGGGGAAAAGGAAAATTGAAGTTGAGAAGGCAAATCCATGTTCCACTTGAATGCTGAACTTCTTATGTCACAACTGCCAA TTGATAGCTATTGTATCATTTTATCTTTATATTTGTACATCATATCTTCAATGTTATGCTCTAGACATATATCATTCATA ATCTTGAAAAATATTAATTGGTTACTTCATACATGCTTTTAGAACATAACTGCTATGTTTGTCAAACTAAACTTTTATTT GCTAGTTTATTTTACTATTTGTGTTATCTTATTGTGAGATATAGATATCCTGATTAGGCTGTTGAAAATTGTAACAGATG ACAGTTAATTACATGAGTGGTATGAAGAATGACATGTTAATGCAAAAATATGGATTTTCGTCACCTGTGGTAAGTTTCTT TCCATTTAAATATTTATGAAAGGATTGTTCTATATTTAGATCATTGTGCTGAAAATTTGACGGCTGACACCCTCAGCTAT TGCAAAAGAAGCTCATACAATATGCATTTAATCAGCGAAGAAAATAAGGAAAAATCACACACTGAAAGCCCATTCATTAT ATATGCCACTGTCAATCATAGCATTATAATTGGTCAACCAGTTGAATTGGAAATTGGTCAAGTTTTGTAAAAACTGGATA AACTGGCAACGGTATAAACAGTCAGAATAGTAGTGTTATTTGGTGACATTTTTATTGCATGAAGGGCCACATCATCATTC TTCACCAATACTACTAAGTATGCTGTGTGCAGGCACTTCTTTGAAGTATTTCTATTGTTTTGTTCTTTCATCACTCTTGT AATAATTCATGTAAACTTATACGCCTGATATTTGATCGGTTGAGTTTTGAAATTTTATTTCTCTAAGTCGCTTAAATTTG CAGAATCCTTGGGATACGATCGAATTCTCAGGCAATGCACGTATTCATTTGGAATCCTTCTTGTCAATCTTCAATATATC TGGCCTTCCAGAGGAGTATTTCCATAACAGTATGACAATATGATTTTTCATTCTGTAATCTGCTTTCTTAGGCTTCTCTA TTCATATTGCCGTTATTTAGGATATTAATATGAAATTTGTAGCAGATAATCTATCGAACGAGGGGGATACTTTTGTTGAT GGAGCAGTCATAGCTGCAGCGCGAACATTGCCAACATGGTCAGATGGGGATGTGCCTCCGGTCCCCAGTGCAGAAAGAAA GGCTGTGAAGACGTTACAAGACGAATGCCAAAAGATGCTTTCTGGATTCGCTACAACTTCAAAGCAAGACCAGAAATTGC TAGGTAAATTTGATGTTCAGACTTCATATCTGGAACTGATTGTCATGATAATTTGTTTTGCAACATAACCGCATTGTTGA GTGCATGTATCTTCCTGAAAGTTGTAATGTTGATTCTTTGTTTTAGCCTTAGTCTGTTTATTATATTGTATTTTTATATT AATAATACACGTTTGAGGGGTGAAGTAATTGGTCTTTAATTGGACTTAACTTGTATGATAAGAGCTAATGCTTAGCTTAC ACATCATGACCACAGATTCCATGCCTGAAGCTACAAGAACACTTGAAGCTGCACTAAAGTATGTAAAATTTACATCATCT AGCAGTTTCATAAGCTTTTTAAAATTTTAATCTGTAAAATCTTAGCCCTGTGAATGCTACATGTGCAGGTATAGATTGCA CCGAAAATTGTTCATTGAGAAAGTTATGCAAGCATTGGAGATCTATCAAGAGAGAATACTATTCTGATTCTAATCTTATT ACTGTATAATAGGCAGGAAAATTTTGTAACATTGCTGAGTAGCTGTAATCTTGTATCACTAAAGTAATGTTCTTCATCCA TGGATTGTTGGCTGTGTTCTACTATATTCATTTGTTTTATTAGAAAAGAGGTGTGGAAGTTTTCTTGTGTAAAAGCATTT TTATGTAACCACAAACCGATGAGAGGACCAGATTACATGGCTGACGGTAAACAACCTAAACAGAAAGAAAATGATTCATT CACACCCCAATTTGAGCTCCACCTTGAAAGAGATAGGAAGAGAAGAGAAGAGAGAGAGGTGAGAGATATGATAAATCATG TAATAGAGAAAAAAATATGAAGAAAAAGTGCAAGTAAACATTAAGGGGTTAATGGTGAATGAAATTGTCCCACCATGATA GTTACATGGGTTATGGGCGTCATATGCGATTCTCATATCAAACAATAGTGTATATGGTCAATGTCATTCTAGTTTCCAGT ATAATGAATTGTATGTTTTGATGACATCAAACGTCA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0245200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTCTTCTTCCTTTCATCTTTATCAGCCTACACACTGCTTCTTCTCCAACACCCAGTTCACAGGTCTGCGCCATGG CTTCTTCTGCCGACCCACTTACTCTCATGCTCAAAACAAAGTGCAACCCATCAAAGCTTCCGTTGCTGCACCCCCATTTC CATTGTTTCAGCCTCCCAAAGTTGAAGAACCAACGTCTGAGTTGGAGCCTGCAGACCCTGACTTCTATAGGATCGGTTAT GTTCGGAGCATGCGAGCTTACGGGATTGATTTTAAGGAAGGGCCAGATGGTTTTGGTGTGTATGCTTCCAAAGATGTAGA ACCTCTTCGCCGGCCTAGGGTTATAATGGAAATTCCTCTTGAATTGATGCTAACCATAAGCAAGAAGCTACCGTGGATGT TTTTCCCTGATATAATTCCCATTGGTCATCCAATATTTGATATTATCAACTCGACAAATCCAGAGACAGATTTGGACTTA AGGTTAGCATGCCTCCTCTTATATTCATTTGACTGCCAAGAAAACTTTTGGCAGTTATATGGTGACTTCTTACCAAGCGC AGATGAGAGCACTAGCTTACTTCTAGCTACAGAGGAGGAACTTTTGGAGCTGCAGGATCCTAATCTTGCTTCTACTATGA GAAGTCAGCAACAACGAGCATTAGAATTCTGGGAGAAAAACTGGCATAGTGGTGCACCCCTTAAAATAAAGCGTCTTGCT CGTGATCCTCAGAGGTTCATTTGGGCAGTAGGTATTGCACAATCACGATGTATTAATATGCAAATGAGAGTTGGTGCGTT AACTCAAAACGCAAACATGCTGGTTCCTTATGCCGATATGCTGAACCATTCATTTGAGCCAAATTGTTTTTTTCATTGGC GTTTTAAGGACCGGATGCTTGAAGTTCTTATAAATGCTGGGAGGCGGATTAAAAAGGGAGATGAGATGACAGTTAATTAC ATGAGTGGTATGAAGAATGACATGTTAATGCAAAAATATGGATTTTCGTCACCTGTGAATCCTTGGGATACGATCGAATT CTCAGGCAATGCACGTATTCATTTGGAATCCTTCTTGTCAATCTTCAATATATCTGGCCTTCCAGAGGAGTATTTCCATA ACAATAATCTATCGAACGAGGGGGATACTTTTGTTGATGGAGCAGTCATAGCTGCAGCGCGAACATTGCCAACATGGTCA GATGGGGATGTGCCTCCGGTCCCCAGTGCAGAAAGAAAGGCTGTGAAGACGTTACAAGACGAATGCCAAAAGATGCTTTC TGGATTCGCTACAACTTCAAAGCAAGACCAGAAATTGCTAGATTCCATGCCTGAAGCTACAAGAACACTTGAAGCTGCAC TAAAGTATAGATTGCACCGAAAATTGTTCATTGAGAAAGTTATGCAAGCATTGGAGATCTATCAAGAGAGAATACTATTC TGA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0245200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASSSFHLYQPTHCFFSNTQFTGLRHGFFCRPTYSHAQNKVQPIKASVAAPPFPLFQPPKVEEPTSELEPADPDFYRIGY VRSMRAYGIDFKEGPDGFGVYASKDVEPLRRPRVIMEIPLELMLTISKKLPWMFFPDIIPIGHPIFDIINSTNPETDLDL RLACLLLYSFDCQENFWQLYGDFLPSADESTSLLLATEEELLELQDPNLASTMRSQQQRALEFWEKNWHSGAPLKIKRLA RDPQRFIWAVGIAQSRCINMQMRVGALTQNANMLVPYADMLNHSFEPNCFFHWRFKDRMLEVLINAGRRIKKGDEMTVNY MSGMKNDMLMQKYGFSSPVNPWDTIEFSGNARIHLESFLSIFNISGLPEEYFHNNNLSNEGDTFVDGAVIAAARTLPTWS DGDVPPVPSAERKAVKTLQDECQKMLSGFATTSKQDQKLLDSMPEATRTLEAALKYRLHRKLFIEKVMQALEIYQERILF
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13271:SF54
54 480 427 1.2E-239 –
PANTHER
PTHR13271
54 480 427 1.2E-239 –
ProSiteProfiles
PS50280
76 321 246 9.586
IPR001214
Gene3D
G3DSA:3.90.1410.10
82 335 254 5.8E-31 –
SUPERFAMILY
SSF82199
96 336 241 2.62E-35 –
Pfam
PF00856
97 320 224 3.2E-20
IPR001214
SUPERFAMILY
SSF81822
333 476 144 5.23E-21
IPR036464
Gene3D
G3DSA:3.90.1420.10
385 478 94 4.6E-7
IPR036464
Pfam
PF09273
409 461 53 1.3E-5
IPR015353

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0245200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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