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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0245200 |
| Transcript ID | LotjaGi6g1v0245200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein N-methyltransferase; TAIR: AT4G20130.1 plastid transcriptionally active 14; Swiss-Prot: sp|Q84JF5|PTA14_ARATH Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14; TrEMBL-Plants: tr|B9GYG2|B9GYG2_POPTR Uncharacterized protein; Found in the gene: LotjaGi6g1v0245200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:55758390..55762780) extracted from Lotus japonicus Gifu genome v1.2.
AAAGTTGAAGAACCAACGTCTGAGGTGAACCCCATTTTTGTTGTTGTTGTTGTTCATAGTTTGGAAGTTACAACTAGGAC CATAACCTGTTAAATTAGTTTATAAGTAGAAAATATTGATTGAGTAGAGTGAGTTAGTGAGTGTTGTTTCTATAGTTTGA TGTGCTTTTAGCAGATAGAGTACCATAAAGATTGAGATTCAGTGTCTTATTTCATGAATTCTTAAACTTTATGGGGTTTC TGTTTTGACGAGGGTTGTGATTTTTCTTACATTTTTTTGTTGATTTTTTTGTTTCTCAAGTTGGAGCCTGCAGACCCTGA CTTCTATAGGATCGGTTATGTTCGGAGCATGCGAGCTTACGGGATTGATTTTAAGGAAGGGCCAGATGGTTTTGGTGTGT ATGCTTCCAAAGATGTAGAACCTCTTCGCCGGCCTAGGGTGAGTAGCTTCATTTAAGACTTTTGCAATTGATGGCACTAT ACTTACAATCTACCTGATATAAATAAAGCCTTTGTGACTGCTGGCTGTGGCACATGAATAGATAATTGCACACATAGTAC ATAGCTAGTTATTTGCATAATGTCCTTTATTAGGAGTTGTTGATGGCTGTTTTTCCTAATGATGTACTTGGACAGGTTAT AATGGAAATTCCTCTTGAATTGATGCTAACCATAAGCAAGAAGCTACCGTGGATGTTTTTCCCTGATATAATTCCCATTG GTCATCCAATATTTGATATTATCAACTCGACAAATCCAGAGGTAATTGGAATTCTCCTCTAAAGCCATTAGTTCATAATA AGATATAATTGATATGCTTGATTTTTTTTTTCATGATAAATACACAAGTTATCAAATTGTCACCCCTTGTTGTAACAGTA GTATGTACTCAAAAAGTAAACAGCCCTTTTATAGTCATCTGCCTAATGTAATTGTGTTAATATTTGTGGCAGACAGATTT GGACTTAAGGTTAGCATGCCTCCTCTTATATTCATTTGACTGCCAAGAAAACTTTTGGCAGTTATATGGTGACTTCTTAC CAAGCGCAGATGAGAGCACTAGCTTACTTCTAGCTACAGAGGTGCGTAATAATTTTCAGTTGAGCCACAAAATTCATATG AGCTCTCTTAAGTTGGCTTGGAATCCTTTGTAATATTAAGGAAGGGCATTATGCAATCCTTTTTGCAATTACTGTAATTT TTTGGAAACGACTTTGTGACATATGGTGTTGATTTGTATATCCAGGAGGAACTTTTGGAGCTGCAGGATCCTAATCTTGC TTCTACTATGAGAAGTCAGCAACAACGAGCATTAGAATTCTGGGAGAAAAACTGGGTAAAAAGCAAAGTGTTCTCGTTGA ATTTGTTAGCTTTCCATTATGTTACTAACAAATTGTGTTAATCTTGTCAGCATAGTGGTGCACCCCTTAAAATAAAGCGT CTTGCTCGTGATCCTCAGAGGTTCATTTGGGCAGTAGGTATTGCACAATCACGATGTATTAATATGCAAATGAGAGTTGG TGCGTTAACTCAAAACGCAAACATGCTGGTTCCTTATGCCGGTAAGCTAAATTTACCTTAGATCGTCTGATTAAACATGA TAACTTTGTTGTACTATTAATATAATAAAAAATATATTTTACCTTCAATTTTCACCTTAGCTCTATATTTTACTATCATG TCCTTTACATATTTGAGGTGTTCGTTAATATTAAAACTTGATGACAAGTACCACAAAATTATGCATGGAATAGATATTTT CTGCTCTACAAAAAGAAAAATCGAAATCTTTGAGCAGAAGGGCAAAATGTTTGCAAGATGTTACACACCCTTCTCATGGG GGATTTTTTTATGTTACACACACTTCTCATCGTAGTACTACTTATTTTCTCCACTTCAAATGTATAGTTGTTTTTTTAAG TTGACAGATTAACTTAGTCTTACTTTTCAGATATGCTGAACCATTCATTTGAGCCAAATTGTTTTTTTCATTGGCGTTTT AAGGACCGGATGCTTGAAGTTCTTATAAATGCTGGGAGGCGGATTAAAAAGGGAGATGAGGTAAATCATTTGATTCTCCT AAAGCTAAGACAAAACACCAAAAATAACAAGAAAAAAAGGACAATTTTTTTTAGCTCTAGAAGGCTCTAAGTAATGGAAT GAGATGGGGAATAGAGTGGAACAGAACAGAATAGAAGAAGTTACTATTCTGTTGTTTGAATATTATTGTGATCTAATGGG GAAGAAATCTGGTTCCTTCCCATGCACCCTGAGATGGAGGGTAGAAAAGGTGGGGTGTTGGATGGGATGGAATTGAATTG AATGCATTCCACCATGTTCTAGTCCACATCCATCCTATTTTAAATCAGCCAAGCAATGGAACTTAATGTCATTCCATTCC ATCCATTTCTATCAATCCAAACATAGCTTAAAGAAAAGGCAATGTTAACTCAAGAAGGATGTTAAATTTATTGCATATTT GCTAAAGAAACCCCCTACACAACCCATACAAATAAGAATCTATGGCTAAAAATTCTCATGTTATTTATACTATAGATATA TTCGTCTAAAACCAGCAAAGAGAGCATAGGTCCACAAGTCCTCTAAATTGTTACTGCTCTGCTGAAACCTCTAAATTGAA TGAGGGGGGAAAAGGAAAATTGAAGTTGAGAAGGCAAATCCATGTTCCACTTGAATGCTGAACTTCTTATGTCACAACTG CCAATTGATAGCTATTGTATCATTTTATCTTTATATTTGTACATCATATCTTCAATGTTATGCTCTAGACATATATCATT CATAATCTTGAAAAATATTAATTGGTTACTTCATACATGCTTTTAGAACATAACTGCTATGTTTGTCAAACTAAACTTTT ATTTGCTAGTTTATTTTACTATTTGTGTTATCTTATTGTGAGATATAGATATCCTGATTAGGCTGTTGAAAATTGTAACA GATGACAGTTAATTACATGAGTGGTATGAAGAATGACATGTTAATGCAAAAATATGGATTTTCGTCACCTGTGGTAAGTT TCTTTCCATTTAAATATTTATGAAAGGATTGTTCTATATTTAGATCATTGTGCTGAAAATTTGACGGCTGACACCCTCAG CTATTGCAAAAGAAGCTCATACAATATGCATTTAATCAGCGAAGAAAATAAGGAAAAATCACACACTGAAAGCCCATTCA TTATATATGCCACTGTCAATCATAGCATTATAATTGGTCAACCAGTTGAATTGGAAATTGGTCAAGTTTTGTAAAAACTG GATAAACTGGCAACGGTATAAACAGTCAGAATAGTAGTGTTATTTGGTGACATTTTTATTGCATGAAGGGCCACATCATC ATTCTTCACCAATACTACTAAGTATGCTGTGTGCAGGCACTTCTTTGAAGTATTTCTATTGTTTTGTTCTTTCATCACTC TTGTAATAATTCATGTAAACTTATACGCCTGATATTTGATCGGTTGAGTTTTGAAATTTTATTTCTCTAAGTCGCTTAAA TTTGCAGAATCCTTGGGATACGATCGAATTCTCAGGCAATGCACGTATTCATTTGGAATCCTTCTTGTCAATCTTCAATA TATCTGGCCTTCCAGAGGAGTATTTCCATAACAGTATGACAATATGATTTTTCATTCTGTAATCTGCTTTCTTAGGCTTC TCTATTCATATTGCCGTTATTTAGGATATTAATATGAAATTTGTAGCAGATAATCTATCGAACGAGGGGGATACTTTTGT TGATGGAGCAGTCATAGCTGCAGCGCGAACATTGCCAACATGGTCAGATGGGGATGTGCCTCCGGTCCCCAGTGCAGAAA GAAAGGCTGTGAAGACGTTACAAGACGAATGCCAAAAGATGCTTTCTGGATTCGCTACAACTTCAAAGCAAGACCAGAAA TTGCTAGGTAAATTTGATGTTCAGACTTCATATCTGGAACTGATTGTCATGATAATTTGTTTTGCAACATAACCGCATTG TTGAGTGCATGTATCTTCCTGAAAGTTGTAATGTTGATTCTTTGTTTTAGCCTTAGTCTGTTTATTATATTGTATTTTTA TATTAATAATACACGTTTGAGGGGTGAAGTAATTGGTCTTTAATTGGACTTAACTTGTATGATAAGAGCTAATGCTTAGC TTACACATCATGACCACAGATTCCATGCCTGAAGCTACAAGAACACTTGAAGCTGCACTAAAGTATGTAAAATTTACATC ATCTAGCAGTTTCATAAGCTTTTTAAAATTTTAATCTGTAAAATCTTAGCCCTGTGAATGCTACATGTGCAGGTATAGAT TGCACCGAAAATTGTTCATTGAGAAAGTTATGCAAGCATTGGAGATCTATCAAGAGAGAATACTATTCTGA
CDS sequence (LotjaGi6g1v0245200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGAGCTTACGGGATTGATTTTAAGGAAGGGCCAGATGGTTTTGGTGTGTATGCTTCCAAAGATGTAGAACCTCTTCG CCGGCCTAGGGTTATAATGGAAATTCCTCTTGAATTGATGCTAACCATAAGCAAGAAGCTACCGTGGATGTTTTTCCCTG ATATAATTCCCATTGGTCATCCAATATTTGATATTATCAACTCGACAAATCCAGAGACAGATTTGGACTTAAGGTTAGCA TGCCTCCTCTTATATTCATTTGACTGCCAAGAAAACTTTTGGCAGTTATATGGTGACTTCTTACCAAGCGCAGATGAGAG CACTAGCTTACTTCTAGCTACAGAGGAGGAACTTTTGGAGCTGCAGGATCCTAATCTTGCTTCTACTATGAGAAGTCAGC AACAACGAGCATTAGAATTCTGGGAGAAAAACTGGCATAGTGGTGCACCCCTTAAAATAAAGCGTCTTGCTCGTGATCCT CAGAGGTTCATTTGGGCAGTAGGTATTGCACAATCACGATGTATTAATATGCAAATGAGAGTTGGTGCGTTAACTCAAAA CGCAAACATGCTGGTTCCTTATGCCGATATGCTGAACCATTCATTTGAGCCAAATTGTTTTTTTCATTGGCGTTTTAAGG ACCGGATGCTTGAAGTTCTTATAAATGCTGGGAGGCGGATTAAAAAGGGAGATGAGATGACAGTTAATTACATGAGTGGT ATGAAGAATGACATGTTAATGCAAAAATATGGATTTTCGTCACCTGTGAATCCTTGGGATACGATCGAATTCTCAGGCAA TGCACGTATTCATTTGGAATCCTTCTTGTCAATCTTCAATATATCTGGCCTTCCAGAGGAGTATTTCCATAACACAGATA ATCTATCGAACGAGGGGGATACTTTTGTTGATGGAGCAGTCATAGCTGCAGCGCGAACATTGCCAACATGGTCAGATGGG GATGTGCCTCCGGTCCCCAGTGCAGAAAGAAAGGCTGTGAAGACGTTACAAGACGAATGCCAAAAGATGCTTTCTGGATT CGCTACAACTTCAAAGCAAGACCAGAAATTGCTAGATTCCATGCCTGAAGCTACAAGAACACTTGAAGCTGCACTAAAGT ATAGATTGCACCGAAAATTGTTCATTGAGAAAGTTATGCAAGCATTGGAGATCTATCAAGAGAGAATACTATTCTGA
Protein sequence (LotjaGi6g1v0245200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRAYGIDFKEGPDGFGVYASKDVEPLRRPRVIMEIPLELMLTISKKLPWMFFPDIIPIGHPIFDIINSTNPETDLDLRLA CLLLYSFDCQENFWQLYGDFLPSADESTSLLLATEEELLELQDPNLASTMRSQQQRALEFWEKNWHSGAPLKIKRLARDP QRFIWAVGIAQSRCINMQMRVGALTQNANMLVPYADMLNHSFEPNCFFHWRFKDRMLEVLINAGRRIKKGDEMTVNYMSG MKNDMLMQKYGFSSPVNPWDTIEFSGNARIHLESFLSIFNISGLPEEYFHNTDNLSNEGDTFVDGAVIAAARTLPTWSDG DVPPVPSAERKAVKTLQDECQKMLSGFATTSKQDQKLLDSMPEATRTLEAALKYRLHRKLFIEKVMQALEIYQERILF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 398 | 398 | 2.7E-227 | – | |
| PANTHER | 1 | 398 | 398 | 2.7E-227 | – | |
| ProSiteProfiles | 1 | 238 | 238 | 9.258 | ||
| Gene3D | 2 | 248 | 247 | 4.4E-31 | – | |
| SUPERFAMILY | 13 | 253 | 241 | 1.74E-35 | – | |
| Pfam | 14 | 237 | 224 | 2.0E-20 | ||
| Gene3D | 249 | 396 | 148 | 1.7E-11 | ||
| SUPERFAMILY | 250 | 394 | 145 | 2.09E-20 | ||
| Pfam | 327 | 379 | 53 | 8.4E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0245200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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