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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0250800 |
| Transcript ID | LotjaGi6g1v0250800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WD40 repeat-like protein; TAIR: AT4G15900.1 pleiotropic regulatory locus 1; Swiss-Prot: sp|Q42384|PRL1_ARATH Protein pleiotropic regulatory locus 1; TrEMBL-Plants: tr|A0A151T5Z5|A0A151T5Z5_CAJCA PP1/PP2A phosphatases pleiotropic regulator PRL1; Found in the gene: LotjaGi6g1v0250800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:56299707..56305738) extracted from Lotus japonicus Gifu genome v1.2.
TCTTATGGGGTCGAGTTTCTTCAACCTGTTGGAAGCGCGGTTTCCTCCCATCACCAATCGTCTTCACTTCACTTCAATTC AATCCAATCTGAAAACCCTAAAGCTTCAGGTGGTCGTTAATGGAGGTGGTGGAACCCGTAGAGCCACAATCACTGAAGAA GCTAAGCTTCAAGTCCCTCAAGCGTGCCCTCGATCTCTTCTCTCCTACTCATGGACAACTCGCTCCTCCCGATCCCGAAA GGTGCCTCCTTTCCCCTTTTCCGTTTCCAAAATCGTAACTTTTCATTGTTTCTAAGTACCCTTTATCTTCCAATGCTGAT TCTAATTCATTCTTGCCTTTGTTCTTTGTTGCAGCAAGAAAATTCGCGTTAATTACAAGGTTAGTTTATCTTAATCATGA TAATGTGTTTGAGTTTTTGTTAATTTTAACTTGGTAATCATATTGGCCTGGTTTTTTTTTTCTCTATCCCAAAACCCTAA ACCTAGACAAGAAGAATGAATGTAAATTGAATGAAATTTGGATTTATATGAGTGCTTTCGAGTTTATTTTGATTATTAGT GGAGGTAGTTATGCTGTATGGTTTGGAATGGAAATTAGGTAAATGCGGAGTACGGTGGAATCAAAGGCGCCACTGATCAG CCTTCCCGTCAAACTAGTTCTGCTACACCGGATACTCAACAAGCAGGGCCGTCTAACGCGCTGGCTCTACCAGGTGCGAT ATCCATTGTGATTATCTTGGTGTAAGGATATCAATTATCTAGCTAGGGAACTTGATAAGTTAACTTCAGGGTGGTTAACT GGTTATGTTTTCTCAGTATCTTTTTGTTATACTTGGTTAATTAGCATACATCTTCTTGTTACATTGTCATTATCTATTAT TTCAATTTGAGTGTTATGTTATTGCTTTGCTTTATTTTTTGGTCTGAGTTTGTAGGAGATCTATTTTCAGATAATTTTGT TGTATGGTCATGAAGATAAAATGTATAGGCGTCTGCTGACCTTAGCAAGTTTGTCTGGCTCAAATAGAGAATGGGGGGTG GGGGTAAGGGGAGGGAGGGAGGGAGGGAAAATAAAACTCCCTTGTATGGTTTGGTTGAAGGGGAGGGGAAGGGGGATTGG AGGTTAAATAATCCTTTTTCTCTTTGTATTTAGGGGGAGGATGGGAATATAAAAGTAATTTGCTAGTATATCCTTCCAAA ATATGAAAGAATGGATACAAAAGAAACCTTGACTAATATGACTTATACTAATGGAAAGAAACTATACTGTAGCGTGCAGA ACTTAAAAGTGAAGAAGTATGAAGGCGGTAGTAATATAGAACTGTAAGGGATAATGTATTTACGGAAAATTTTGAAAATA TAAAAATAATAAAGGATCTCTTAGGAGGGGAGGGTTTTCCATCTCCTCTTTGCGCCCCCTCCAAACTTCTGAACCCAATG AGTTTCTTTTGTTATTAAAATCCCTCTCCTTGTTTTCCCTTACCTCCATGTTCCTTTAGCCAAACATTATGTTAGTCTTT GGACAACTCCTTCCTCACCAAGAACTGTAGAATACAAGATAACGGATTTGAAATTTGTTGTATGTGGCTTCACTGTTGAA GACAAGATCAGTATTTTCCCTGTAATTATTCTTCAATTAAAAGAACCTGTTTGTTAGTGTCTAACATGTTGATATTGTTT TCTCTTGTTATATGACAGGTCCAGGAGGTTCGAAGGATCCACAGAAAGGCGGATCCCAAAATGCTTTGGTTGTTGGTCCA TCTATGCCGTCCACAGCTCCGTAAGTATTTTCTCCATTCTTCTTGAACTTTATGTACATTGATATGTGGGATAGAGAGAA CTTTTCACACAGTTAAATAATCTGCTTGGCTCATGCTTCTCAGAATTATTTTTCTTTATAGTTCTTAAGTTATATTCAGA CGTATTAGACTATATAACAAATTAACAATTGAGATTGAATCATATATTCTGCTTGTAAAACTTTAATAATGAATCAAGTG TAATTCAGTATTCTAAATATTGTTTGAAGAACGTGTTTGGTAAATACAAGAAACTGTTTACTATGTAAACATGATGAAAG ATTGCATAAGTTGATGAAAGTATGATAAGGTGTGAGGTTTAATATTATGTTCCTTTTTTGTTTAGTGTTTTCTAGTTCAT GGGTCTTAAATATGGTTTTTTGAAATCACATGCATTGTTATCCTATGCCATTGCAGAAAGGAAAACCATGGGTTGCAAAT TTGAGGCATGGATTGTGTTACAAACTTGCAGAGTTTTTGAAAGGTGTTATTGAAGATTATTGATTCTTATCTTTTTGTTA CTTTACAGGAACGATCATGGTTTTCCCAGCAAAAGTACAGCCATCATTTCTGCCTCTGGTTCATCTGAAAGGTCGTGGCT TTCTCTGTGTCTTTTACAGTTTAAGAGATTTTAAGCTGATTTGTAATTGTAGCTGAGACTTTGCATATACTTCCTAGAGT GCAATGCTTTTTTGTTGGTTCTGCACACTATCTTCTTATGTTTACTCAATATGTTTGTGTACACATTTTGCTTATGATTG TGTTTTTATGTAGGATTGACATTCTGTTGTTATGACCTTTTTGACTAAACTGATAGTTTTTTTATCTCAGGAATTTTTCA ACATCTGCTCTAATGGAGAGAATGCCAAGTAAATGGCCACGACCTGTGTGGCATGCGCCATGGAAGAACTACAGGGTGAG AACCTGACTTCTTTTTTAATTATAATTTATATTTAGCAATGGATCAGAGGCATAATTCTACTTTTGTGATTTTAACCTTG TTTTATTTTCTGTAGGTCATCAGTGGTCACTTAGGGTGGGTGAGATCTATTGCAGTTGATCCCAGTAATACATGGTTTTG TACTGGTTCTGCAGATCGAACTATCAAGGTATTTAATTTCAAATTGCAGGTCTTAGTTGTTCATATTAGACGAGTAGGAA AATTAGCGAGTCATGTTGAATTGTTGATTCTGTGGTTAACTTTCCTTTTTGATCATTTCATCTAACAATTCTGCCTTTTT GTAAGTATTCCCAGATTCAAATTTTATAACTGTTGCATTTTTATGGATAATTGTGGGATAATCAGTGCTTCTATATAGTC TGCAAAATTACTTTTACATTCTTGTGACTTGTGATGTTGCCCTTTTCCTAGAGTTATCTTTATGCAACGTGTCAATTATT GATTGATTTTGACTTGTCATAACTCATAATTATTTACTCTGTCATTACCATACTTACCAGAAATGAGTTGAAGGTATAAA TCTTGAAATAGTTCTTGAAACTTTTCATGCCAAGCATATTATTTTGTTCTCTTTCCTATTTAAAACTTAGGATACTTTTT TGCTAAGTCGTTCATTTGAACAGATATGGGACTTGGCAAGTGGAGTACTCAAGCTCACATTAACCGGTCACATTGAACAA GTGAGAGGTAAGATACTGAGGTAACTATGAATGGTGGTGCTAGCAATTGTGAACCAAGTTCGTAATAACAGTTTGCTTTG TTTACAGGCCTTGCGATTAGTAACAGACATACATACATGTTTTCTGCTGGTGATGATAAACAAGTTAAATGTTGGGATCT TGAACAGAATAAGGTCAAATCCCCTTTTCAGTATTTGTTTTTCTGGCTGAATATTTCAGTACTTTTTCAACTCTGTCAAA TAACTGGCTACTAAAACACATGTTATTCTATTTAGGTTATTAGGTCGTATCATGGTCATTTGAGTGGTGTTTATTGCTTG GCTCTTCATCCTACAATTGACGTTTTACTCACGGGAGGACGTGATTCTGTCTGCCGGGTATAGACTTTATTGATATAGTT ACTTTATGGTATATTTAGATCAATGCAATACCCTACTAAACAATTTCCCATATTTTTTAATTTGTTATTAAGGAAGAAAT ATGATGGTTATACTTCGGTGATACCAAATTTGCAGGTCTGGGATATACGTAGTAAAATGCAAGTTCATGCTCTCTCGGGT CATGATAACACTGTCTGCTCTGTATTTACGCGGCCAACGGTACGTAGATTATTCTACTGTTGCCTATATTATTTTTTCTT TTGATATTCTGAGTAGTGCCACAACTTTAATTTTGTTTTATTTTTCAAAACCTTTTCTTCCCGTACTTCACGAGCTTTAT TCAGTTTTTTATTTTGGTTTTAGGATCCCCAAGTTGTTACTGGTTCTCATGACTCTACCATCAAGATGTGGGATCTTAGA TATGGTAATTTATGGTTTTATATTGCTTATCTTCTTGTTTCCTTCTATCCCGTGATTATATGCACTTGAATTATCCTGAA TGTGTTTGGTATCAATCTTACACATGATGCATTCATGCAGGTAAAACAATGTTAACCCTTACAAATCATAAAAAATCTGT TCGAGCCATGGCTCCACACCCTAAAGAGTATGTGTTTTATATCAGTTGATTGTTACTTGTAGAATGATATCTTATGGTTG GCTATTTGATCTTCTTTAAGTTTGCCATTCTTTCTGGTCTTACCCTTTTTTCCTTTTTTGTTACCTGCAGGCAATCTTTT GCATCTGCATCTGCGGATAATGTTAAAAAGTTCAACCTTCCCAAAGGAGAATTTGTGCACAATATGCTGTGAGTTCATAA ACTTTTACCAAACCTGTGTGATTAGGGGTATTATTAATGAAGAGTTTTCCTTTGGGATGGAGAAAAGGAACAATTTATGC TAAATATTCAGGTTCAGATTCTGCAGCTTGAATGAAACATACATATATTGCTCTTACAATTTATGTGCCTGTTTTATGTG CAGCTCACAACAGAAAACTATCATCAATGCGATGGCCGTCAATGAGGATGGAGTGATGGTTACCGGAGGTATGGATTGGA CAATAATGTCTTTGATGGAATAAATTCAATTAATCCACGTCGCTATTCTCCATGATCATGTGACAAGGGATTACTGTCCC CTCAGTCTTGCTGAAAAAGAATTTGCGCAGATTTATATATTTTTTTCCCATTACATTCTTCAACTTTGCTATTTTTTTTT TGGTTGAAGGTGACAACGGCAGTATGTGGTTCTGGGACTGGAAAAGTGGTCACAATTTCCAGCAAGCCCAAACAATTGTG CAACCTGGTATGCATATTTGTCTGCTCTTGGATGTTTACTTTGATGCTATTTAATTCTACCATAAACTGATACACAACAC AAGATTGACAAGTATAATTACTCTATCTACCTTCCTATTGCAGGTTCACTGGACAGTGAAGCTGGTATTTATGCTTTAAC CTATGATGTTACGGGTTCAAGGCTTATAAGCTGTGAAGCCGACAAGACCATAAAGGTGTGGAAAGAAGATGAAAATGCCA CGCCAGAGACTCATCCCCTTAACTTCCGGCCTCCAAAAGATATCCGTCGATTCTAGCTATTATCCGTCCTCATATCTCAG GCTTATTTATTCTGCTAAGTAATGCACAAGTTGACTTGTTGGGCAATGATTCACAGTTTCTCTTTTTAACAGACTATCAT CATCCGTTTTTTGCACCATTGGATTGCATGAAGATTATTGCTGCCTAGATTCATATGTATTTCAATAGCTTTACAATTAA GCTGATGTATTAGTGTATTACTCAAACTCAACTTGTTGAAAGCTCGATTGAGTTTGTCGATGTTCAAGTTATGAATTAGC TCAAGTTTGATATAATATGGCAAATAGTTTGTGTATGTGTATTACTTAAGTTATTTTTTGTTGGATAAGTGTTTCTTAAA TTATAATTTTGTTTTTTTATTTTCCTAGTATTGCTTGTCTAGTCTAGTGCTAATTTTCTGGAATCGCTATAAATGGGGGT AGTCTTGAAGGAAAATATATACTATCTCCATCAAAGATTTTAGACCAAACCATTTCAAAATAACATTAAAGTAAGACAAG GGAACAACACTTCTACACTAAAATTTTTACACTATTTTAAGCATCATTTAACATGACTCAGTTATTGGTTAACAAAGTGA ATAGATTGGTTATCAATCTGAGACTACTGTAG
CDS sequence (LotjaGi6g1v0250800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGTGGTGGAACCCGTAGAGCCACAATCACTGAAGAAGCTAAGCTTCAAGTCCCTCAAGCGTGCCCTCGATCTCTT CTCTCCTACTCATGGACAACTCGCTCCTCCCGATCCCGAAAGCAAGAAAATTCGCGTTAATTACAAGGTAAATGCGGAGT ACGGTGGAATCAAAGGCGCCACTGATCAGCCTTCCCGTCAAACTAGTTCTGCTACACCGGATACTCAACAAGCAGGGCCG TCTAACGCGCTGGCTCTACCAGGTCCAGGAGGTTCGAAGGATCCACAGAAAGGCGGATCCCAAAATGCTTTGGTTGTTGG TCCATCTATGCCGTCCACAGCTCCGAACGATCATGGTTTTCCCAGCAAAAGTACAGCCATCATTTCTGCCTCTGGTTCAT CTGAAAGGAATTTTTCAACATCTGCTCTAATGGAGAGAATGCCAAGTAAATGGCCACGACCTGTGTGGCATGCGCCATGG AAGAACTACAGGGTCATCAGTGGTCACTTAGGGTGGGTGAGATCTATTGCAGTTGATCCCAGTAATACATGGTTTTGTAC TGGTTCTGCAGATCGAACTATCAAGATATGGGACTTGGCAAGTGGAGTACTCAAGCTCACATTAACCGGTCACATTGAAC AAGTGAGAGGCCTTGCGATTAGTAACAGACATACATACATGTTTTCTGCTGGTGATGATAAACAAGTTAAATGTTGGGAT CTTGAACAGAATAAGGTTATTAGGTCGTATCATGGTCATTTGAGTGGTGTTTATTGCTTGGCTCTTCATCCTACAATTGA CGTTTTACTCACGGGAGGACGTGATTCTGTCTGCCGGGTCTGGGATATACGTAGTAAAATGCAAGTTCATGCTCTCTCGG GTCATGATAACACTGTCTGCTCTGTATTTACGCGGCCAACGGATCCCCAAGTTGTTACTGGTTCTCATGACTCTACCATC AAGATGTGGGATCTTAGATATGGTAAAACAATGTTAACCCTTACAAATCATAAAAAATCTGTTCGAGCCATGGCTCCACA CCCTAAAGAGCAATCTTTTGCATCTGCATCTGCGGATAATGTTAAAAAGTTCAACCTTCCCAAAGGAGAATTTGTGCACA ATATGCTCTCACAACAGAAAACTATCATCAATGCGATGGCCGTCAATGAGGATGGAGTGATGGTTACCGGAGGTGACAAC GGCAGTATGTGGTTCTGGGACTGGAAAAGTGGTCACAATTTCCAGCAAGCCCAAACAATTGTGCAACCTGGTTCACTGGA CAGTGAAGCTGGTATTTATGCTTTAACCTATGATGTTACGGGTTCAAGGCTTATAAGCTGTGAAGCCGACAAGACCATAA AGGTGTGGAAAGAAGATGAAAATGCCACGCCAGAGACTCATCCCCTTAACTTCCGGCCTCCAAAAGATATCCGTCGATTC TAG
Protein sequence (LotjaGi6g1v0250800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVVEPVEPQSLKKLSFKSLKRALDLFSPTHGQLAPPDPESKKIRVNYKVNAEYGGIKGATDQPSRQTSSATPDTQQAGP SNALALPGPGGSKDPQKGGSQNALVVGPSMPSTAPNDHGFPSKSTAIISASGSSERNFSTSALMERMPSKWPRPVWHAPW KNYRVISGHLGWVRSIAVDPSNTWFCTGSADRTIKIWDLASGVLKLTLTGHIEQVRGLAISNRHTYMFSAGDDKQVKCWD LEQNKVIRSYHGHLSGVYCLALHPTIDVLLTGGRDSVCRVWDIRSKMQVHALSGHDNTVCSVFTRPTDPQVVTGSHDSTI KMWDLRYGKTMLTLTNHKKSVRAMAPHPKEQSFASASADNVKKFNLPKGEFVHNMLSQQKTIINAMAVNEDGVMVTGGDN GSMWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALTYDVTGSRLISCEADKTIKVWKEDENATPETHPLNFRPPKDIRRF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 480 | 472 | 1.1E-224 | – | |
| MobiDBLite | 55 | 125 | 71 | - | – | |
| MobiDBLite | 61 | 82 | 22 | - | – | |
| MobiDBLite | 95 | 125 | 31 | - | – | |
| SUPERFAMILY | 155 | 457 | 303 | 1.83E-74 | ||
| SMART | 159 | 198 | 40 | 6.7E-10 | ||
| Pfam | 161 | 198 | 38 | 3.7E-9 | ||
| CDD | 162 | 457 | 296 | 9.89326E-93 | – | |
| Gene3D | 163 | 459 | 297 | 2.0E-104 | ||
| ProSiteProfiles | 166 | 466 | 301 | 55.524 | ||
| ProSiteProfiles | 166 | 207 | 42 | 14.853 | ||
| PRINTS | 185 | 199 | 15 | 7.6E-8 | ||
| SMART | 201 | 240 | 40 | 3.7E-6 | ||
| Pfam | 206 | 240 | 35 | 2.6E-4 | ||
| ProSiteProfiles | 208 | 249 | 42 | 13.416 | ||
| SMART | 243 | 282 | 40 | 1.8E-8 | ||
| Pfam | 245 | 282 | 38 | 3.9E-6 | ||
| ProSiteProfiles | 250 | 291 | 42 | 14.084 | ||
| PRINTS | 269 | 283 | 15 | 7.6E-8 | ||
| ProSitePatterns | 269 | 283 | 15 | - | ||
| SMART | 285 | 324 | 40 | 1.5E-6 | ||
| Pfam | 289 | 324 | 36 | 2.0E-5 | ||
| ProSiteProfiles | 292 | 333 | 42 | 15.555 | ||
| PRINTS | 311 | 325 | 15 | 7.6E-8 | ||
| ProSitePatterns | 311 | 325 | 15 | - | ||
| SMART | 327 | 365 | 39 | 0.6 | ||
| SMART | 368 | 407 | 40 | 0.5 | ||
| SMART | 419 | 457 | 39 | 0.19 | ||
| Pfam | 431 | 457 | 27 | 0.15 | ||
| MobiDBLite | 461 | 480 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0250800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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