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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0261900 |
| Transcript ID | LotjaGi6g1v0261900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Agenet domain-containing protein; TAIR: AT3G06520.1 agenet domain-containing protein; Swiss-Prot: sp|Q9FZD9|DUF3_ARATH DUF724 domain-containing protein 3; TrEMBL-Plants: tr|A0A151T678|A0A151T678_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0261900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:57419434..57423815) extracted from Lotus japonicus Gifu genome v1.2.
CTTGGGGAAAAAGCAAACCAGTAATGAAGACACTCACAGAGGTTCACTCCCTTAGGTATTTGCATTGTTGAAACCTTTTA ATCTTCACCATTCTCTTTCCACTCTCAACCAGAACCAGAATCAAAACCAAACCATGATGTCCATTTTCAACAAAGGTGAA GGAGTTGAGGTAATCAAGCAAAACGAAAATGACGAATACAGCTACTTTCCGGCCACCGTGCTCCGGCCACCGTCGAAAAA CAACAACATGGTGTTCGTGGAGTACCAGGCTCCCACAAAGTCACGCAATAGAGAGTATGTGAATGTTGCTAGCGTGAGAC CCAAGCTTCCATACGAGCTCAATCCATGGTTCAAGGTCGGTGACTCCGTCGACGCTTTCCGGCCGAATGTCACTGCATTT TCTTGGTGCCCTGCCACCGTCTCCGACATCCTCGAAAACTCCACCTACCGTGTCGACTTCCGTGGTCATTCCGCCGCCGT CGACCACTGTAGTCTCCGCCTTCACCGGGATTGGGTAAATGGGAACTGGGTCCCACCTCTCCCTCAACCTCAACCGCAGG TTCGTTCGTTCCCACTGCAATTTCCACTTGTTTCTTTGCAGTCAAATGAGAAAGTTGAAAACTTTGTGGCAGTTGATAGA GAAATTCCTCCAATGGAGTAATTTCCTAAATGGGTTTTGTGGGTATAGTGAGTTTCCATTTGGATGCAAGCCAAAAAGCA CTTATTGAAACTTATTTAGTGCATTTTTTAGTAGTGAAGCTCCAATAAGTGCTTTTTGGTTCGTATCCAAACAGGTTAGT ACAAATGTAACCGGACACCATGAAGTATTTTATGGATTAAGATTAGATTACTGTTGCTTCATTATTCAAATGTAGTTATA AAGTGTGTTTGGGTTAGCTTTTAGAAACCAATTTAGAGTTCAAAATCAATTATTTGCATGAAGCTTTCCTCATGTTTGGT TTGGTGTTTGCTAGCATTGGAATCAATTTCATTGATTGAGAAGCTACACTTGGTAACTTCTGTGGTGGATGTGATTTTAG ACTGAATGTAAGTGATCAGTGTTTCCAAATATGCTAAAAGTTTAGCTTTTGAGTAGAACTGCATTTGCTTTTGAGTCCAC TTGCACTCTTGATCTTAATGATTTTGTGGGTAAACTGGAAAGTATAAATGTATTCACTTTGAGATTTCTTGGGTTAAGAT TATGACTACTTGTGAGTAAGTATAAATGTATTCACTTTGAGATTTCTTGGGTTAAGATTATGACTACTTTAAGTTAAATC AAATATAGACATAGCCTTACTTTACTTTGAGTATGAAAACTTTAGAGTAGGTGAGTGCCTTTGTGGATGCCCATCCATAC ATGTAATGTGATACGCTACGTTGAAATGCATTCCCTTAGCAGAGTGATTGTATGTACAAAAATGGATTCTCATGTTTTTG TAGTGGGGAACATTTTTTCCATAGCTATAACAAGTTCAAATTGAAGATGCATTTTTTTCATTGGATGTTTGCTAATTTAC CGAAAACTTGAGTTGCAGGAGCAGCCACCAGAAACGGTGACAAGGTCTGAAAAAATAAGGATCAAGATCAAATGCAGCAG AAGCCCACAAAAAGAATCAGAGTTTTTTAAAGGGAAAATAGTGGAAGTCAGCAGCGATGATGAAGGTTATAAGGGTGCTT GGTTCGTTGCTACTATTGTTGACATAATAGCAAAAGACAAGTTTCTAGTAGAATATAGGGACCTGGCAACCGAAGATGGC ACCCAGCTCTTGAATGAAGTAATCCATGAGAGGTTTATTAGGCCCTGCCCCCCTGAAGTTCCACTTGCTGGTTCTTTTAA ACAGTTCCAAGAGGTTGATGCATGGTACAATGATGGGTGGTGGGAAGGAGTGGTGTGTGAAGTACGTAATGGCAGAGAGT GCCTTGTTTCTTTTATGAACAATGATGTAATGGAATTTGAAAATTCTAAACTAAGGCCTCATCAGGACTGGTTGGATGGA AAATGGGTCATGTCTTCCAAGGTAAAACACTTAGATGCCTCTCTTTTTTCGTTTTTATTAATCAAAGATTTTCTTCTGAA ATTACAGTTGACAATTACGTCTTCCAAAATTGACTTAGGGGATAAGCAAACTTCAAACACCAAACTTGTTGAAATCATAG TTTTTACTCTCTTGGATTTGATGAGACTATCGTGTTTCCTGTTACTTTATATTATAAATCAGTTTCTCTACAAGAGTTCT ACCATATGTTGAAACTTGGGATGTCAATTAAATGATTCCAAGATAAAGCGTTCTAAAAATTTCAGGCATTTTGTACCTTA TAAAAACAAACCATCAACATCATGCATAACTTGTGAACTGCTCATGGTCATCACGTAGTTTAAATTTGTCTGTTTATCTT CATATTATTATTGGATATAATGTTAAGCGAAAGCGCATCATTTTCTTACTAATTGCTCAATTCTGTTTATGGTGGAAACG TCTAAATCTACTTGACAATATGAGATTTTAAAATATCAGGAGTCAAGTGAGTTGGTGAAGAAGTTTGGAGATGTGAGGCC TGAGGCCAATAATCTCACTGGAAATAAATTAATTGTGAAACTTAAAAAGTCAAGTGACCCGGCAAAGAGGCCCAGGGATG TAATGGAAAGAACCCCGATCACCAGAAGCAAACATATGTTACAATTTTGCAGAGGTGCAAAGGTAGAAGTTAGAAGCGAT GAAGAAGGATACCAAGGTTCCTGGTATACTGCCATTATTGTTGACCCTTTGCAGAGCAGCAAGTACTTGGTGGAATATTC AACCCTTAAAACAGATGACTTGACTGAACAACTGAAAGAAGTAGCAGAAGCTTTTAATATCAGGCCATGTCCACCAGATA CTAGTGGTGCTGATTGCTTTTTGCTGCATGAATGGGTTGATGCTTGGTATAATGATGGATGGTGGGTAGGTCAGGTATCC CGTGTTCTTGGAGGCTTCAAGTATATGGTTTACTTCTGGACTTCAAAGGAGGAGCTGGAATTCGAATACAGTCTTCTAAG GCCTCATCAGGACTGGATTGATGGAAAATGGGTGCTTGCTTCTTTGGTATGACTTAAACAACACTTTATTTGATTTGTTA ATTTGCCAAAATATTTTGATATGATATGCTTGGTAAAATTCATTGATCTTCATCACTTTTATATTTATAATTTATATAGT GAGTAACCTCTCCACATGATGGTATAGCCCATTTAAGCTAATTACTGATTACTGTTGTGACCTCTTACTAATTGTTTCAC TCATTTAAATGTTACTTTTTGTCGTTGGATCTTTTAGTATGTTGTGATATAGTGGTTCCTTGCAGCTGTACAACAATGTC TTCATTTAAGGCAACAAATAAATTCTTTCTTGCACTATCTGTTAACTGTGAGGTAGTTTGCCTTCTTTTCTTTTTGGCTT TGTATTGGAGAGTTCTTTCCTTTGGCATTTCTCGGGGTGGATGCACAGCTTATGGCTTTATTTTTCCAGTCTTTTGAGCA ATTTTCTTTTAACATGAAACTTGAAAGACAAATGTAAAGTTTCCATTTTCTACCTTATTAGTTCATTCATGTAATGAATA ATTATTTAGTTACAGTTTGGAATGTTAAATGCATTTAGAAAATTTGTTGTGTTGACAAGTTATTATTGGACTAGTTCTGA GACAAAAATATGGTAGTGGTAGGGTAGCATGTTGAAATGTTGATCCGCCAGTAATGTAATAAACTTGCTCCATTCATTTG ATATATTTGAACTCTATAATCAGCTGTTGACTAATTTTATTTCTCTATTGAATGATTGCTCCATTCATTTGATATATTTA TATACTGAATGATTGATTCCATTACTCTATTAATCTTTTTCTGGGAGTGTAAACTGATTACTCTGGTTCTTGTTCTCTAT GGTTTCTTCTAGGATCCAAGACCTGTTCGTTAGTGAATTGCTAGAAGTTCTTTTTGCTACTTTGCTACCTTCACTGAAAT GCTTTTTGCTGCCAGCCATCCTATCATTTAGCACTTTCTGGTGCTAATTGCAACTTCAACCTAGAGGTTCTTTTTGCTAC TTTGCTACCTTCACTGAAATGCTTTTTGCTGCCAGCCATCCTATCATTTAGCACTTTCTGGAGTTGAAATGTAATCTGCA AATATGTGTAATATGCTGATCTGTGTTTTGTCTACTCCTGGTGCTAATTGCAACTTCAACCTTTTTCTTTTGTCTGTAGT TATCCCACTGACATTACTTTATGTATATGTAATGTTAATATATCCCAAAATCAGGATTATTATGTCGAAGAACATATGAA CTGAGTTTATGTTTTGATTACTTATAACCTATTGGGTTTACTTTTGTTGCTACTTAAACAAA
CDS sequence (LotjaGi6g1v0261900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTCCATTTTCAACAAAGGTGAAGGAGTTGAGGTAATCAAGCAAAACGAAAATGACGAATACAGCTACTTTCCGGC CACCGTGCTCCGGCCACCGTCGAAAAACAACAACATGGTGTTCGTGGAGTACCAGGCTCCCACAAAGTCACGCAATAGAG AGTATGTGAATGTTGCTAGCGTGAGACCCAAGCTTCCATACGAGCTCAATCCATGGTTCAAGGTCGGTGACTCCGTCGAC GCTTTCCGGCCGAATGTCACTGCATTTTCTTGGTGCCCTGCCACCGTCTCCGACATCCTCGAAAACTCCACCTACCGTGT CGACTTCCGTGGTCATTCCGCCGCCGTCGACCACTGTAGTCTCCGCCTTCACCGGGATTGGGTAAATGGGAACTGGGTCC CACCTCTCCCTCAACCTCAACCGCAGCCACCAGAAACGGTGACAAGGTCTGAAAAAATAAGGATCAAGATCAAATGCAGC AGAAGCCCACAAAAAGAATCAGAGTTTTTTAAAGGGAAAATAGTGGAAGTCAGCAGCGATGATGAAGGTTATAAGGGTGC TTGGTTCGTTGCTACTATTGTTGACATAATAGCAAAAGACAAGTTTCTAGTAGAATATAGGGACCTGGCAACCGAAGATG GCACCCAGCTCTTGAATGAAGTAATCCATGAGAGGTTTATTAGGCCCTGCCCCCCTGAAGTTCCACTTGCTGGTTCTTTT AAACAGTTCCAAGAGGTTGATGCATGGTACAATGATGGGTGGTGGGAAGGAGTGGTGTGTGAAGTACGTAATGGCAGAGA GTGCCTTGTTTCTTTTATGAACAATGATGTAATGGAATTTGAAAATTCTAAACTAAGGCCTCATCAGGACTGGTTGGATG GAAAATGGGTCATGTCTTCCAAGGAGTCAAGTGAGTTGGTGAAGAAGTTTGGAGATGTGAGGCCTGAGGCCAATAATCTC ACTGGAAATAAATTAATTGTGAAACTTAAAAAGTCAAGTGACCCGGCAAAGAGGCCCAGGGATGTAATGGAAAGAACCCC GATCACCAGAAGCAAACATATGTTACAATTTTGCAGAGGTGCAAAGGTAGAAGTTAGAAGCGATGAAGAAGGATACCAAG GTTCCTGGTATACTGCCATTATTGTTGACCCTTTGCAGAGCAGCAAGTACTTGGTGGAATATTCAACCCTTAAAACAGAT GACTTGACTGAACAACTGAAAGAAGTAGCAGAAGCTTTTAATATCAGGCCATGTCCACCAGATACTAGTGGTGCTGATTG CTTTTTGCTGCATGAATGGGTTGATGCTTGGTATAATGATGGATGGTGGGTAGGTCAGGTATCCCGTGTTCTTGGAGGCT TCAAGTATATGGTTTACTTCTGGACTTCAAAGGAGGAGCTGGAATTCGAATACAGTCTTCTAAGGCCTCATCAGGACTGG ATTGATGGAAAATGGGTGCTTGCTTCTTTGGATCCAAGACCTGTTCGTTAG
Protein sequence (LotjaGi6g1v0261900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSIFNKGEGVEVIKQNENDEYSYFPATVLRPPSKNNNMVFVEYQAPTKSRNREYVNVASVRPKLPYELNPWFKVGDSVD AFRPNVTAFSWCPATVSDILENSTYRVDFRGHSAAVDHCSLRLHRDWVNGNWVPPLPQPQPQPPETVTRSEKIRIKIKCS RSPQKESEFFKGKIVEVSSDDEGYKGAWFVATIVDIIAKDKFLVEYRDLATEDGTQLLNEVIHERFIRPCPPEVPLAGSF KQFQEVDAWYNDGWWEGVVCEVRNGRECLVSFMNNDVMEFENSKLRPHQDWLDGKWVMSSKESSELVKKFGDVRPEANNL TGNKLIVKLKKSSDPAKRPRDVMERTPITRSKHMLQFCRGAKVEVRSDEEGYQGSWYTAIIVDPLQSSKYLVEYSTLKTD DLTEQLKEVAEAFNIRPCPPDTSGADCFLLHEWVDAWYNDGWWVGQVSRVLGGFKYMVYFWTSKEELEFEYSLLRPHQDW IDGKWVLASLDPRPVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 3 | 69 | 67 | 19.0 | ||
| PANTHER | 5 | 133 | 129 | 6.1E-133 | – | |
| PANTHER | 5 | 133 | 129 | 6.1E-133 | – | |
| Pfam | 8 | 66 | 59 | 1.5E-5 | ||
| SMART | 71 | 129 | 59 | 7.5E-4 | ||
| PANTHER | 159 | 488 | 330 | 6.1E-133 | – | |
| PANTHER | 159 | 488 | 330 | 6.1E-133 | – | |
| SMART | 167 | 235 | 69 | 6.4E-14 | ||
| Pfam | 172 | 232 | 61 | 3.7E-19 | ||
| SMART | 238 | 293 | 56 | 1.2E-9 | ||
| SMART | 355 | 423 | 69 | 1.6E-17 | ||
| Pfam | 360 | 420 | 61 | 1.5E-18 | ||
| SMART | 426 | 482 | 57 | 4.0E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0261900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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