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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0263300 |
| Transcript ID | LotjaGi6g1v0263300.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Boron transporter; TAIR: AT3G62270.1 HCO3- transporter family; Swiss-Prot: sp|Q9M1P7|BOR2_ARATH Probable boron transporter 2; TrEMBL-Plants: tr|I1L0M1|I1L0M1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0263300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:57699877..57705000) extracted from Lotus japonicus Gifu genome v1.2.
GCCTAACACACATACTCATTGATAAAGAGTTGTTTGTTTGTTTGTTCTCTTCTCTATATACAAGATCATTATATATGCAT TGAACCATATCATTAAACAACACCACAAACAAATAAAATGTGTTTCAGATTTAATGTAATGCTTCTGTCCAAGCCAATCC AGCTTGTCATCAACTGGCAAAACGCGGTTATCTTCATCATCTTATAATCATGTCTATGTGTTTGTGTCTTCAAATGCAGC AACACCAAAATCTCTCACACACTGCAATCTTCTCCATCTTCACTTCATTCCTTTTGTACCCTTTTGTGCTTTTGACTCAC ATTGTCGTCTACTTGCATTTCTGTGTACCCCCACTGTGAAAGTTCCTCCCTTTCTGCTTGCTTAATCCTCCAATCCTTTG TCATTTTGGTCATTCACTCCAACTGGGGTTTGAAGCTTGGTGACTCGGTCTGTTCCTTAAAAATTGGAACTTTGTTAGAG CCAAGATTAACTGATTTAGTACAGTGCTGTTTCTTCAAATCTGTACTGTTTTTTTGGGTCATAAATCATGGAAGAGACAT TTGTTCCATTTCGTGGAATAAAAAATGATCTTCAGCAGAGGTTGATGTATTACAAGCAAGACTGGATTGGTGGTCTCACT GCAGGTTTCAGGTACATCTTTTCTTATGCTGCAAAATCACTCACTTGTTTTCTTAAATCTGGGTAGTGGATTTTGATGTC ATGACATGTATTTTAATGAAGATATATAATTTTTTTCTTTTTATTCAGTTGGTAAGTTTTATTTTAACTTTTACATTTTT TTTTCTATTGGAATGTTAACTTGGTACTTAAACTGCTGTTTTGTAGGATATTAGCCCCTACCACGTATATATTTTTTGCA TCAGCAATTCCAGTTATTTCATTTGGAGAACAATTGGAAAGAGATACAGGTAAATTACTCCTATTGACTAATATCCCATA TGTTGTGTTTCTTGAGTTTTATTTATACACTAATATAGTGATTTGGTGCACCTTAAGTTTGATGTACTGTGTGTTCACCT TTTTTTCAGGTGGAATACTCACTGCAGTGCAAACATTAGCATCTACTGCTGTGTGTGGAATTATACACTCAATTATTGGA GGCCAGCCTTTGCTGATTCTTGGGGTGGCAGAACCAACCGTAATTATGTACACGTTCATGTTCAACTTCGCAAAAAATAG ACCGGATTTGGGTTCAAAGCTTTTTCTAGCATGGACTGCATGGTATAGCTTGTTCACTTTCAGATTTTAAGTGATTAGTG ACTTATGTTAGCTTTCATATTTCTTATTTTGTGTTGGTAGTTTTCCTAAACAGAGAAATTTATTTGCCTTGTGAATTCAT TGTATGAGCAGGGTATGCATTTGGACTGCCATCTTGCTGTTCCTACTTGCTATCTTAGGAGCTTGCTCCATCATCAACAG GTTCACACGCATAGCAGGGGAATTGTTCGGCCTTCTTATCGCAATGCTCTTCATGCAAGAGGCTATTAGAGTAAGAGGCA TATTTCTGTTTTCTCTGACAATAATATGGACTCATGAGTTTTGTTTTAGCACAAATGATTATGTGGCTCTAGCATGACAA AGTGGAAAATAAGATAATTTATGATATAATATTGGATGGAAATTAATTCAACTGAGACAGATGCTTTCTGATTGGGTTTA ACAGGGACTCATCCACGAGTTTCGCATACCTGAGAGATCAGACCTAACATTACCTGAGTTTGAATCTTCATGGAGATTTG GAAATGGAATGTTTGCTTTAATTCTGTCCTTTGGCCTTCTGCTTACAGCATTGAGAAGCCGAAAAGCAAGGTCTTGGCGA TATGGATCAGGTAAAACCCGTTAGACTTTGTAAAGGTTTACATTGAAACAAGCAAGAAAGCATAAAATTTTCCTTCCCTT ATAGTATTTGTGGATTGTTGACAAAAGAAGTATTTAACAGAAGTCGATAAGCTGATAAGTAATAACTTAATTGCACTTAC GGTGGTCTTCAGAGTGATACATGTACAGCATTATGTACTTATATAGAATATGCAAAATGAAAAAACTAAAGATTTTCCTT TTACTCCAAAACAGCTGAAAATGTTCTTTTAACTCAGCTTTTGATGAAAAGTCCTTTCATTATGTTTCAGTTGTTCTTAG ATTTATTTTCGCCTTATTACAGGATGTCTGCGAGGCTTCATAGCAGACTATGGTGTCCCATTGATGGTTCTAATATGGAC TGCTGTTTCTTATATACCTGCGGGGAGTACGCCAAACGGAATCCCTAGGCGCCTCTTCAGTCCAAATCCATGGTCTCCTG GTGCATATGAAAACTGGACTGTCATAAAGGCATGGCTACTCAACAAATCCAAATTATTTATTGTTAGGATATATGATGAT CAAAATTTCAGTGTTTGGATATATGGTGATTAAAGTTCTCTTTAAAATTTTATAATCTCAGTACTTCAATGGAAAGTTCT CATGTAATTTTCAAAATCATTAACAGGACATGCTGAATGTGCCTGTTCTCTATATTATTGGAGCATTTATTCCAGCGACG ATGATTGCTGTGCTATATTATTTTGACCATAGTGTGGCATCTCAGCTTGCTCAGCAGAAAGAGTTCAATTTAAGAAAGCC ACCTTCTTTCCATTATGATTTACTTCTTTTGGGATTCATGGTACATGATCCTCCTTGCTTTATGTTTAATTCCATTGGCT CTTTTCCTTTTGCCTAATGCTCTTTATTTTCCCTTTCCAATTTAAGACAGGGTATAGCGTTCTGATCTGCCCAAGAACTA AATATTTTGATTTTTGATATGTTGGGTTTATGACATTGACAGGTTATAATATGTGGTCTTATTGGAATTCCCCCATCAAA TGGTGTTATTCCACAATCTCCAATGCATACCAAAAGTTTAGCTACATTGAAGCACCAGGTAGATTAATTAGTTTTCTAGT TCTATAGAGCTTCACTTTATCAAACTGATAAATGTTGCCAAAGCACTTCCGTTGCTACGAACTCTGATAGACTGGAATGT TAAAGTGGAAACAGAATACATAGTGACATGCATACTGAAACTACCATCTTTGTATTTTGGTGATTTGCAGTTACTTAGAA ACAAGCTTGTTGCAAAAGCTAGAAGTTGTATGAGAAAGCAAGAAAACCTGGGACAAGTATATGGAAGTATGCAAGATGCT TATTGGCAGATGCAAAGCCCTCTAGCTCACCAGGAACCTTCCTCTCAGGTATGTAGGATTGTGAACTTCTTTACTCTCCC TTTTCCCTTTCACCTATATGCATGATTACTCTTCGAAACTGGACAAATCATAGTTGATAAGAATTTTCTGACATTTAATT CCTCAGTTCTGCTTTGGGTTTGGAAGTTCTCTATTCTAGGACCTGCGCAAAAAAAACTTCCATTATGTCATTGTTTTAAT GGTTTTAAAAACTGAACTTTATTCTGATATTGTCAGTATTATCATCCAACCTTGCCGAAACCTTGTTTTGACAGGGACTA AAAGAGTTGAAAGAGTCAACTATTCAATTGGCATCAAGCTTGGGGAGCATAGAGGCTCCAGTTGATGAGTCAATATTTGA TATTGAGAAGGAAATCGACGACTTGTTGCCTGTCGAGGTTAAAGAACAGCGAGTGAGCAACTTGCTCCAATCTTTGATGG TAGGAGGATGTGTTGCAGCAATGCCTTTGCTAAAAAGGATTCCAACTTCTGTACTGTGGGGCTATTTTGCTTTCATGGCC ATCGAAAACTTACCCGGCAACCAGTTCTGGGAGCGGATTTTACTAGTTTTCACTGCTCCAAGTAGACGATACAAGTATGT CTTAAACACCATTTCCTGTCTTTTATCTCTTAAAAATATTTAACAAGTTACATTCACTAACTTGCTGCCGGTTTTTTATT TCTGTTGCGAAATAATTAGAGTTCTGGAGGAGTGCCATGCAACTTACGTGGAAACTATACCTTTCAAGACAATAGCAGTA TTTACAGTCTTCCAAACTGCTTACTTGCTTGTTTGTTTTGGTATCACGTGGGTTCCAATAGCTGGGGTTCTATTCCCATT GATGATCATGCTTCTGGTTCCTGTAAGACAATACATTTTGCCCAAGTTCTTCAAAGGGGCACACCTTCAGGATTTAGATG CTGCAGAATATGAAGAAGTACCTGCTTTACCATTTGAACTAGCTACTGTAAGTTGTCAATACCAGAGCCATAATCACCTT TTTTTTTCGCTACACATTAGGGGTATTTTTTCTCTTCGCAGAAAGAAATGGTTGAATACATTCAAACTATTTATACCATT ATGGCATGGCATTGCATAAAACCTATATGATACTGATATCAACAGTAGCAAGTAGTGATTTAGATCTCTTTGGAAAATTA TCTGTACTGGGCTATTTCATTTTTCATGCTTTTGCCCCATAACTTCTTTGAGGTCAATCAGCTTCTTATGCTACTGTCTT CCATGTTTGTTCTATTTATGCAGGAAGGTAACTTGAGCAGGACAGCTTCATTTGCAGATGATGGAGAGATTCTAGATGGA ATGATTACTCGAAGCCGGGGTGAGTTTAGACGTGTTTGCAGTCTGAAGGTGGTGAGCTCCCCTGGAACTCCATCCAAAGA GTTGACAGGTATTCAAAGTCCAAGGTTCTCAGATAAAGTATACAGCCCTAGGGTAAACCAACTCAGAGAAAATCATAGCC CTCGAGGTGTTGGGAGAGGACCATTTAGCCCTGGAGAAGCTAAGCCATCGAATTTGAGAAAGAGTGGATAAAGACTACAC ATTTTTTTGTTGATACTAATGCCTACAATTCAAGGATTGCCAGCAAAAGGTGGCATGCCCCTTGCTTATTTTAACATCTG ATTCTTGAGAATGGCAATTGTAGCGATATAAATTATTTAGTGTAGGGAATTTGTAGCAAGAGTTCTGTCGCTTGTATACA TATATTTTTTTAAATACCAAATTGTAGAGATGATTAAAGTCTATGATTTGTTTGTGAATGCAATTGTGGAGGCATCGAGT GGTGTTTACTAGTTGAGTTAAAGTGAAATCACTTTCATTTATAAAGAGTTGTTAACGTCCGTTGGCATTTCAGTTGAATC CAAG
CDS sequence (LotjaGi6g1v0263300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAGACATTTGTTCCATTTCGTGGAATAAAAAATGATCTTCAGCAGAGGTTGATGTATTACAAGCAAGACTGGAT TGGTGGTCTCACTGCAGGTTTCAGGATATTAGCCCCTACCACGTATATATTTTTTGCATCAGCAATTCCAGTTATTTCAT TTGGAGAACAATTGGAAAGAGATACAGGTGGAATACTCACTGCAGTGCAAACATTAGCATCTACTGCTGTGTGTGGAATT ATACACTCAATTATTGGAGGCCAGCCTTTGCTGATTCTTGGGGTGGCAGAACCAACCGTAATTATGTACACGTTCATGTT CAACTTCGCAAAAAATAGACCGGATTTGGGTTCAAAGCTTTTTCTAGCATGGACTGCATGGGTATGCATTTGGACTGCCA TCTTGCTGTTCCTACTTGCTATCTTAGGAGCTTGCTCCATCATCAACAGGTTCACACGCATAGCAGGGGAATTGTTCGGC CTTCTTATCGCAATGCTCTTCATGCAAGAGGCTATTAGAGGACTCATCCACGAGTTTCGCATACCTGAGAGATCAGACCT AACATTACCTGAGTTTGAATCTTCATGGAGATTTGGAAATGGAATGTTTGCTTTAATTCTGTCCTTTGGCCTTCTGCTTA CAGCATTGAGAAGCCGAAAAGCAAGGTCTTGGCGATATGGATCAGGATGTCTGCGAGGCTTCATAGCAGACTATGGTGTC CCATTGATGGTTCTAATATGGACTGCTGTTTCTTATATACCTGCGGGGAGTACGCCAAACGGAATCCCTAGGCGCCTCTT CAGTCCAAATCCATGGTCTCCTGGTGCATATGAAAACTGGACTGTCATAAAGGACATGCTGAATGTGCCTGTTCTCTATA TTATTGGAGCATTTATTCCAGCGACGATGATTGCTGTGCTATATTATTTTGACCATAGTGTGGCATCTCAGCTTGCTCAG CAGAAAGAGTTCAATTTAAGAAAGCCACCTTCTTTCCATTATGATTTACTTCTTTTGGGATTCATGGTTATAATATGTGG TCTTATTGGAATTCCCCCATCAAATGGTGTTATTCCACAATCTCCAATGCATACCAAAAGTTTAGCTACATTGAAGCACC AGTTACTTAGAAACAAGCTTGTTGCAAAAGCTAGAAGTTGTATGAGAAAGCAAGAAAACCTGGGACAAGTATATGGAAGT ATGCAAGATGCTTATTGGCAGATGCAAAGCCCTCTAGCTCACCAGGAACCTTCCTCTCAGGGACTAAAAGAGTTGAAAGA GTCAACTATTCAATTGGCATCAAGCTTGGGGAGCATAGAGGCTCCAGTTGATGAGTCAATATTTGATATTGAGAAGGAAA TCGACGACTTGTTGCCTGTCGAGGTTAAAGAACAGCGAGTGAGCAACTTGCTCCAATCTTTGATGGTAGGAGGATGTGTT GCAGCAATGCCTTTGCTAAAAAGGATTCCAACTTCTGTACTGTGGGGCTATTTTGCTTTCATGGCCATCGAAAACTTACC CGGCAACCAGTTCTGGGAGCGGATTTTACTAGTTTTCACTGCTCCAAGTAGACGATACAAAGTTCTGGAGGAGTGCCATG CAACTTACGTGGAAACTATACCTTTCAAGACAATAGCAGTATTTACAGTCTTCCAAACTGCTTACTTGCTTGTTTGTTTT GGTATCACGTGGGTTCCAATAGCTGGGGTTCTATTCCCATTGATGATCATGCTTCTGGTTCCTGTAAGACAATACATTTT GCCCAAGTTCTTCAAAGGGGCACACCTTCAGGATTTAGATGCTGCAGAATATGAAGAAGTACCTGCTTTACCATTTGAAC TAGCTACTGAAGGTAACTTGAGCAGGACAGCTTCATTTGCAGATGATGGAGAGATTCTAGATGGAATGATTACTCGAAGC CGGGGTGAGTTTAGACGTGTTTGCAGTCTGAAGGTGGTGAGCTCCCCTGGAACTCCATCCAAAGAGTTGACAGGTATTCA AAGTCCAAGGTTCTCAGATAAAGTATACAGCCCTAGGGTAAACCAACTCAGAGAAAATCATAGCCCTCGAGGTGTTGGGA GAGGACCATTTAGCCCTGGAGAAGCTAAGCCATCGAATTTGAGAAAGAGTGGATAA
Protein sequence (LotjaGi6g1v0263300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEETFVPFRGIKNDLQQRLMYYKQDWIGGLTAGFRILAPTTYIFFASAIPVISFGEQLERDTGGILTAVQTLASTAVCGI IHSIIGGQPLLILGVAEPTVIMYTFMFNFAKNRPDLGSKLFLAWTAWVCIWTAILLFLLAILGACSIINRFTRIAGELFG LLIAMLFMQEAIRGLIHEFRIPERSDLTLPEFESSWRFGNGMFALILSFGLLLTALRSRKARSWRYGSGCLRGFIADYGV PLMVLIWTAVSYIPAGSTPNGIPRRLFSPNPWSPGAYENWTVIKDMLNVPVLYIIGAFIPATMIAVLYYFDHSVASQLAQ QKEFNLRKPPSFHYDLLLLGFMVIICGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVAKARSCMRKQENLGQVYGS MQDAYWQMQSPLAHQEPSSQGLKELKESTIQLASSLGSIEAPVDESIFDIEKEIDDLLPVEVKEQRVSNLLQSLMVGGCV AAMPLLKRIPTSVLWGYFAFMAIENLPGNQFWERILLVFTAPSRRYKVLEECHATYVETIPFKTIAVFTVFQTAYLLVCF GITWVPIAGVLFPLMIMLLVPVRQYILPKFFKGAHLQDLDAAEYEEVPALPFELATEGNLSRTASFADDGEILDGMITRS RGEFRRVCSLKVVSSPGTPSKELTGIQSPRFSDKVYSPRVNQLRENHSPRGVGRGPFSPGEAKPSNLRKSG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| PANTHER | 1 | 710 | 710 | 0.0 | – | |
| PANTHER | 1 | 710 | 710 | 0.0 | ||
| Pfam | 2 | 179 | 178 | 3.9E-36 | ||
| Phobius | 26 | 52 | 27 | - | – | |
| TMHMM | 27 | 49 | 23 | - | – | |
| Phobius | 53 | 63 | 11 | - | – | |
| TMHMM | 64 | 86 | 23 | - | – | |
| Phobius | 64 | 85 | 22 | - | – | |
| Phobius | 86 | 89 | 4 | - | – | |
| Phobius | 90 | 109 | 20 | - | – | |
| TMHMM | 91 | 110 | 20 | - | – | |
| Phobius | 110 | 120 | 11 | - | – | |
| TMHMM | 120 | 142 | 23 | - | – | |
| Phobius | 121 | 142 | 22 | - | – | |
| Phobius | 143 | 153 | 11 | - | – | |
| TMHMM | 154 | 176 | 23 | - | – | |
| Phobius | 154 | 176 | 23 | - | – | |
| Phobius | 177 | 195 | 19 | - | – | |
| Phobius | 196 | 215 | 20 | - | – | |
| TMHMM | 196 | 216 | 21 | - | – | |
| Pfam | 202 | 372 | 171 | 1.9E-25 | ||
| Phobius | 216 | 234 | 19 | - | – | |
| Phobius | 235 | 255 | 21 | - | – | |
| Phobius | 256 | 290 | 35 | - | – | |
| TMHMM | 287 | 309 | 23 | - | – | |
| Phobius | 291 | 310 | 20 | - | – | |
| Phobius | 311 | 330 | 20 | - | – | |
| Phobius | 331 | 351 | 21 | - | – | |
| TMHMM | 336 | 358 | 23 | - | – | |
| Phobius | 352 | 553 | 202 | - | – | |
| Pfam | 460 | 550 | 91 | 1.1E-18 | ||
| Phobius | 554 | 580 | 27 | - | – | |
| TMHMM | 554 | 576 | 23 | - | – | |
| Phobius | 581 | 711 | 131 | - | – | |
| MobiDBLite | 655 | 684 | 30 | - | – | |
| MobiDBLite | 655 | 711 | 57 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Inorganic anion exchanger activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: inorganic anion A(out) + inorganic anion B(in) = inorganic anion A(in) + inorganic anion B(out). | ||
| Biological process | Anion transport | The directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi6g1v0263300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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