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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0266000 |
| Transcript ID | LotjaGi6g1v0266000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Major facilitator superfamily protein; TAIR: AT1G64890.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9XIQ7|FBT7_ARATH Probable folate-biopterin transporter 7; TrEMBL-Plants: tr|I3SSK5|I3SSK5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0266000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:57982497..57987504) extracted from Lotus japonicus Gifu genome v1.2.
CAGAAAGAAAAGCAATCATCACAAAAAATTCTAGTACGTGTCCCTATAAAAACAATAGCCTAGGTATTCTGGTTGGAATC ACAGAAACAGGTGTCGCCTACTCAAAGTGTCTGAAACCTTAGTCATCACAATCAGAACTAGAAACCACAGATCAAATCTA AACCACCTTATTTTCCTCAACTGTGGAGGGAAAGATCAAACATGGTTTCTTCAAAGGGTGGTGGTGAATTGACGAAGAAG GTGTTGGGTTTGGGTTACTGGGTGCAAGGTTTAAGGTGCTTCCCGTGGCTTGCAGTGAGTTTTTTTCTGAAGGATGGTCT CAATGTGGATCCTTCTACTCTTCAGCTTCTTCAGAATTCTGCTAATCTTCCTATGGTTGGCAAGCCTCTTTATGGTCTTG TTTCTGATTCTGTTTACATCTCTGGTCAGCATCGAGTTCCCTACATCGCCATTGGAGGTAAATTGAACTAACATGCATTC TTCATGACCCTTTTGGTTTCTCTCGGTGATTTGATTACATGAAAGCCAAGTTGTACACTTTTTCATCTTGAGAATTGAGT AAACTACCTTCAAGATAATGGGCATTGAGGATTAATTTTTTCTTCTTTGATAAATAAATGGTCTTTTGTTGTTGTTGTTG TGTGTATGAATGTGAATCAAGGTTGTTAATGACGGACAGCGTAGTGTAGCGGCAAGTCCAAAACGCTATTTATTGCGGCA AATAGCGGCGGTGAATAGTGAAGTAGCGGTGTGAACCCAGGGCGCTACACTATAGCGCGCTATTAACAAGCCTGATATGA ATAGAAGAATTTGATTCTTAGGAATAGGGTTAGGTGTAGGGAATGCTGTTTCTTTAAGGAATTGGATGAAGCCCCTTCCT TGAATGTGGTCCTTTGGGGGCTGCTTTGTTAAAGCATAAAGAGAAAGAGATGAGGAAAAAGTAGGATTGAGATTCCAGGA TTTGAAGGGTTTTGTTTCTATGTTCTTTTTCTGTGTACATATATAAAGGAATGAATGTCATTGTTGCTTGAGCATAGAGA TAGGATAAGTTGATACTCTGTTGGCTTCCTTGTGAAGGAAATTTAGAATATCACAAATCCTTCTAGGAAGTAGTTAGCAG GTCAATGGTTTTTTAATGGATTTCTTTGTTTTCATTTTTAATAGAAGAAGGGATAGTAAGAGTGGTGATAAGGAATCATC CTAAGGCAAATTTATAAGAAAGCCAGAGGTCAAACAGAAACTAAGCTAACTCCTAGCAAAACTAATTTCAAAATAGATTT CCTATTCCTCTGCAAGTTTGGGCAGAGTAGCATTCCGGATTCTTTGAGTCTCTATTTTCTCCTCTTTTATCTGTTATTGT TCTTGTTACTGTTCCTATAATTATAGAATTGTTCTGTACATTTTGCTATAACTAAAGTGTAAATACCAGGATCTATCAGA CTCTTAGAAGTAAAGTTGTAAACTATGCCCTGAACACTAGAGAAAGACCAAATCTGCGGTTTTGCACCAGAAGTATGGTG AACTGGGTTAAGGCATTGAAGTTGTTTGTTGAGTTTACGTTGATTTGAACATCAAGTATTCAAAATAGAGACATGTGAAT CAGCATTGTCAGCCATTTCCCTCTAACCAGTAGCTTCTATCATATGCAAACTAGTTATTGTTTTACCTTTTTTTAATACA AAATTTGTTTACCCTGGAGCTTATATTTTATTATCTTCTATTGAGGATGAAGCAAAACTGATAATAACATTTATTCAAGC CAATGCTTAGTACAGTTTCCAATAACACAAGTAAACACCACTTGGATTGAAATACTGAAAGTATTCTCTTCATTCTGAAT TTGTATATTTCAAGTGTTGTTTTACTGTAGCAACTTCTGACTAGGGCTCACTGTTAGTTTAATTCTGATACATCTGTTCT ACAAAAAAATATGTAGCTTGATTTGTTTTTTGTCCGAGAGAAAGTGCTCCAAAAGCAAATTCAGGTCCAACATTTGCCAG CAGATCTGCAGATAGCAGATACCATGACTAAACCTCTGCCTACAACTAGATTTCTTACCTTAAGGAACAAGCTGACTGTG TGTGATGCTGCACACACACCCAGTGCAGCTTGAGGGGGGAGTAATGGAGTGTATAGCACTCTGTTAGGAATATATGATGT ATTGTACTATTAGGATTAGGCAGAAGTAGCTTATTGTGTAAGCTGCTAGTCTTAGTTATAAATAGATCAATTGTGTACTG TGTCAATTACCAATTATCATAATAACAAAATTCAGTTAGAAAGCTTTCTCTCTCTTCTCTCCTTTCTCTCTCTTCTCTCT TTTCTGTTTTTTTTTCTGTTAATCATGAACTTATAATTTTTATCTAAATCTTGAGTCTGATAGTGGATTTTACTACTTTC AATGCTAGAGCTTGACCAAACCTGGTTAAGTTCTACCATTGTAGAGAATGAGAACAAGTTTTGTGTCTATATATCCTTTT GTCACACTCTAATTGGTACCTTTATATCATTCATTGAATTTAGCATAAAAGATTGATATAAGTAAACCTACTCCTAACAT ATATATTGCTTTTAGGGATCGTGCATATCTCAGGTGCAACATGGTGGAACTTGTGTAAATTATTCTGTCTTCTGTGGGCT AAAATGTTGCTTCTTTTAAATTGTTCAATCCCCCACTAATTATTGAGAATCCCTTTAAAGCCACTCCTAGTCTAAATGTT GACTTAGGGAACTAGTGAATGATAATGTTTGCTTACCTCAAGTAGATGCAAATAGTTAAACGGCTATTTGACTTGGATAC CACTTGGCATGAATCAGTTCCCTCTGAACATTTTTGCTTGGCTTGATTTTCAGTAATCTTCCCCCCTCTTTTGTTTTTTG TGGAAATATCATCCCTAGTTTCTTGGTTGCTTAATTTGGAATTGGCATTGATTTTTCATTTAGTTCTCATCTAATAGAGC AACTTGGATGACATTTTCTGATTTTGTGCAAGTAGCCTCATTCTTGTATCTTGATAGTCTTCAGTTGTGTTGAGGAAAAT ACATTAAAATATGCCAAAGACTTTTAGGAGAATCAAATCTATTATGAATTTTAAAATCATTCCAATGTTCGTAGCTTTAT TGCATTTCTAATGTCAACCAGTGACATGAGTCACATGACTAATTCTGAAGAGATTTGTTTATGCAGCTTTCTTGCAGGCA CTGTCATGGCTAGCCGTAGCAATCTCTCCATCAAACATATCTATTTTCACTATCTCCATATACCTCCTCCTTAGTAATCT TGGTGCTTCAATAGGTGAGGTTGCAAATGACGCCATTGTTGCAGAAATGGGTAAACAGCCTCCTTCCTCAAGCAAGAACT CTCAATCGTCATCCTCAGGCAACCTCCAATCATTTGTTTGGATAGCGTCTTCTTTAGGAGGAGTCCTTGGAAACCTTCTC GGCGGAATTTTTATTGGACGGTTCTCCCCGCAGACCATGTTTTTGTTTTACGGCCTTCTCCTTTCTCTCCAATTTTTCAT AACCATTTTAGTTCGTGAGAGCTCTCTTGGGCTCCCAAAGAGTCCATCTGTTGGGATAAGGAAACAGCTTTCAGAGCTAT CGGCTGCTCTAAGAAAACCTGAAATTGCTTATTCGATATCATGGTTTGCAGCTTCTTATGCCATTATTCCTGCACTTACA GGCACCATGTTCTTTTACCAGACACAGTATTTGAAAATTGGCTCATCTGTATTGGGCATCTCCAAGGTATTTGGCCAGGC AACAATGCTTCTATGGGGCATCGTTTACAATCAATACCTGAAATCTGTCCCGCCAAGGAAACTGATATCAACCATTCAAG CTATGATGGCTGTCTTAATGGTTTCAGATTTCTTGTTTGTGCGAGGCTTTTACCGACAAATGGGCGTGCCAGACTCGCTC TATGTTGTGATTTTCTCCGGATTCTTGGAGGTTCTGTTTTTCTTCAAGATTCTGCCATTCAGTGTCTTGATTGCGCAGCT GTGTCCACCAGGATGTGAAGGGTCTATTATGGCATTTCTGATGTCTGCGGTAGCCTTGGCCTTCATTGTGAGTGGATACC TTGGTGTTGCCCTTGCATCATACATCAAGGTAACAGGAAGTGACTTTTCAGGACTTCCACTTGGGCTTTTGATACAAGCT GCATGTACTTTATTGCCAATTTTCTGGTCATCGTGCATACCTGAGTATGTAAAAACAAAATCCAAGCGAAAAGACTAGAA TATTAGCTTTTAGAAGCATATAGTAGTGATTCAAGGAGATAGTGATGTGATGCTGAAAAGATTGATTCTGGTTTATTTCA TTGCATTCATGCATCAGCTGGGAAAAGTAAGATGTATCAGTTGGCTAAATTTTTTTATTCTAAAGTGATAGGTGTAAAGG TATACATCAAGTGAATATGCTTATCCTTTTCCATATATTATATCTTGGGTGGCTTTTGTTTTTTTGAATATTTTGTTTTG CTAAGACAGAAGCAGCGAGATTGATACCTTCAAGCAGCGGTCGGGTGAAAACTGCCACAAACTTGGTTGTGGCATCTGGG AAGGTGGCGGGCAAGTGACCGCCACGTAAACGTTTAGTGGCGGTTATTTAACGGCCACTATGTGTAAAAAAGACCGCCAC TAAAACGTCCCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACATTTCCCCTCTTCGGCCTTCAAAGTT CTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGACCGCTCCGCCCGGGCGCTAAAGTGATAGGTGTAAAG GTATACATCAAGTGAATATGCTTATCCTTTTCCATATATTATATCTTGGGTGGCTTTTGTTTTTTTGAATATTTTGTTTA GCTAAGACAGAAGCAGCGAGATTGATACCTTCAAGCAGGGGCGGAGGCAGGAATTTTATAAGGGAGTGACGAAGATTTAA AGGAATGTAATTTATAAGAAAATTTTAATTTTTCTCACAAAGCATGTG
CDS sequence (LotjaGi6g1v0266000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTCTTCAAAGGGTGGTGGTGAATTGACGAAGAAGGTGTTGGGTTTGGGTTACTGGGTGCAAGGTTTAAGGTGCTT CCCGTGGCTTGCAGTGAGTTTTTTTCTGAAGGATGGTCTCAATGTGGATCCTTCTACTCTTCAGCTTCTTCAGAATTCTG CTAATCTTCCTATGGTTGGCAAGCCTCTTTATGGTCTTGTTTCTGATTCTGTTTACATCTCTGGTCAGCATCGAGTTCCC TACATCGCCATTGGAGCTTTCTTGCAGGCACTGTCATGGCTAGCCGTAGCAATCTCTCCATCAAACATATCTATTTTCAC TATCTCCATATACCTCCTCCTTAGTAATCTTGGTGCTTCAATAGGTGAGGTTGCAAATGACGCCATTGTTGCAGAAATGG GTAAACAGCCTCCTTCCTCAAGCAAGAACTCTCAATCGTCATCCTCAGGCAACCTCCAATCATTTGTTTGGATAGCGTCT TCTTTAGGAGGAGTCCTTGGAAACCTTCTCGGCGGAATTTTTATTGGACGGTTCTCCCCGCAGACCATGTTTTTGTTTTA CGGCCTTCTCCTTTCTCTCCAATTTTTCATAACCATTTTAGTTCGTGAGAGCTCTCTTGGGCTCCCAAAGAGTCCATCTG TTGGGATAAGGAAACAGCTTTCAGAGCTATCGGCTGCTCTAAGAAAACCTGAAATTGCTTATTCGATATCATGGTTTGCA GCTTCTTATGCCATTATTCCTGCACTTACAGGCACCATGTTCTTTTACCAGACACAGTATTTGAAAATTGGCTCATCTGT ATTGGGCATCTCCAAGGTATTTGGCCAGGCAACAATGCTTCTATGGGGCATCGTTTACAATCAATACCTGAAATCTGTCC CGCCAAGGAAACTGATATCAACCATTCAAGCTATGATGGCTGTCTTAATGGTTTCAGATTTCTTGTTTGTGCGAGGCTTT TACCGACAAATGGGCGTGCCAGACTCGCTCTATGTTGTGATTTTCTCCGGATTCTTGGAGGTTCTGTTTTTCTTCAAGAT TCTGCCATTCAGTGTCTTGATTGCGCAGCTGTGTCCACCAGGATGTGAAGGGTCTATTATGGCATTTCTGATGTCTGCGG TAGCCTTGGCCTTCATTGTGAGTGGATACCTTGGTGTTGCCCTTGCATCATACATCAAGGTAACAGGAAGTGACTTTTCA GGACTTCCACTTGGGCTTTTGATACAAGCTGCATGTACTTTATTGCCAATTTTCTGGTCATCGTGCATACCTGAGTATGT AAAAACAAAATCCAAGCGAAAAGACTAG
Protein sequence (LotjaGi6g1v0266000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSSKGGGELTKKVLGLGYWVQGLRCFPWLAVSFFLKDGLNVDPSTLQLLQNSANLPMVGKPLYGLVSDSVYISGQHRVP YIAIGAFLQALSWLAVAISPSNISIFTISIYLLLSNLGASIGEVANDAIVAEMGKQPPSSSKNSQSSSSGNLQSFVWIAS SLGGVLGNLLGGIFIGRFSPQTMFLFYGLLLSLQFFITILVRESSLGLPKSPSVGIRKQLSELSAALRKPEIAYSISWFA ASYAIIPALTGTMFFYQTQYLKIGSSVLGISKVFGQATMLLWGIVYNQYLKSVPPRKLISTIQAMMAVLMVSDFLFVRGF YRQMGVPDSLYVVIFSGFLEVLFFFKILPFSVLIAQLCPPGCEGSIMAFLMSAVALAFIVSGYLGVALASYIKVTGSDFS GLPLGLLIQAACTLLPIFWSSCIPEYVKTKSKRKD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 78 | 78 | - | – | |
| PANTHER | 10 | 434 | 425 | 5.1E-213 | ||
| PANTHER | 10 | 434 | 425 | 5.1E-213 | – | |
| CDD | 14 | 419 | 406 | 2.37245E-75 | – | |
| Gene3D | 17 | 434 | 418 | 4.1E-21 | – | |
| TIGRFAM | 19 | 427 | 409 | 1.6E-65 | ||
| Pfam | 22 | 197 | 176 | 4.4E-41 | ||
| SUPERFAMILY | 28 | 432 | 405 | 3.27E-25 | ||
| Phobius | 79 | 98 | 20 | - | – | |
| TMHMM | 91 | 113 | 23 | - | – | |
| Phobius | 99 | 103 | 5 | - | – | |
| Phobius | 104 | 125 | 22 | - | – | |
| Phobius | 126 | 154 | 29 | - | – | |
| TMHMM | 154 | 176 | 23 | - | – | |
| Phobius | 155 | 178 | 24 | - | – | |
| Phobius | 179 | 183 | 5 | - | – | |
| TMHMM | 183 | 201 | 19 | - | – | |
| Phobius | 184 | 201 | 18 | - | – | |
| Phobius | 202 | 235 | 34 | - | – | |
| TMHMM | 234 | 256 | 23 | - | – | |
| Phobius | 236 | 257 | 22 | - | – | |
| Pfam | 240 | 425 | 186 | 4.7E-42 | ||
| Phobius | 258 | 262 | 5 | - | – | |
| Phobius | 263 | 286 | 24 | - | – | |
| TMHMM | 263 | 285 | 23 | - | – | |
| Phobius | 287 | 297 | 11 | - | – | |
| TMHMM | 298 | 320 | 23 | - | – | |
| Phobius | 298 | 317 | 20 | - | – | |
| Phobius | 318 | 328 | 11 | - | – | |
| Phobius | 329 | 354 | 26 | - | – | |
| TMHMM | 333 | 355 | 23 | - | – | |
| Phobius | 355 | 365 | 11 | - | – | |
| Phobius | 366 | 392 | 27 | - | – | |
| TMHMM | 370 | 392 | 23 | - | – | |
| Phobius | 393 | 403 | 11 | - | – | |
| TMHMM | 399 | 421 | 23 | - | – | |
| Phobius | 404 | 427 | 24 | - | – | |
| Phobius | 428 | 435 | 8 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi6g1v0266000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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