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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0269300 |
| Transcript ID | LotjaGi6g1v0269300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histidinol dehydrogenase; TAIR: AT5G63890.1 histidinol dehydrogenase; Swiss-Prot: sp|Q9C5U8|HIS8_ARATH Histidinol dehydrogenase, chloroplastic; TrEMBL-Plants: tr|I3SWQ6|I3SWQ6_LOTJA Histidinol dehydrogenase, chloroplastic; Found in the gene: LotjaGi6g1v0269300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:58393278..58398196) extracted from Lotus japonicus Gifu genome v1.2.
GTTTCAATGGAGTCTGCGCTTACAGCTTCTAACTGGAACCGTTGCTTCCTTCATCCCCTCAACACCACCACCACCACCAG GAGGCCCTTCTCCGCCACCGCTTTCCGCGTCCGCTGCTCCATCAAGTCCTACCGTTTGTCCAACCTTTCTCACTCTGAGC TTCTCAGCCTCAAAACCCGTCCTCGCATTGATTTCTCATCGATTTTCAGTGTGGTGGGTAATTCAATTCGCCCCATTATG TTTTCTCTCTTTGTTTTCAAATGGGGTTTTGTTTTTCACTCTAAAAATTTATGCTTTTTGTCTTTTCAGGTTAACCCCAT TGTTGATGATGTTCACCAAAGAGGGGATGCTGCAGTGAAAGAGTAGCTGCTTTTTAATTCTTTACTCTCTTCTTATTTTA GGCACCGTTTGGGAAAACAGTTTAATTAAGCTCTTATGGTCATAAGCGCGCTTATGACATAAGCCCTTATTCATAAGCTA TTTTAAAAAATTTATTGAAATAAATTGAAAATAAGTTATATATAAGCATAAGCTCTTTTTCATAAGCTATCATAAGTAGC TTATGAAAATAAGCTTAAAACAGCTTATGACATGGTAGGCCATAAGTTGTTTGCATAAGCTCTCTCAAACACTGGCATAA GCGCTTATGCTATCAGATAAGCTCAAATAAAAGCTCTTCCAAACGGGGCCTTAGTCGTTATTTGATTAAATTGTTTTGTG TTGCAGTTTATATCTTCATTGTGTAACTTCAGCTTCAACTTGGTGTTTTTGTAGATATACTTCAAGGTTTGACAAAGTTG AGCTAGATAAGATAGTTGAAGTTGTCTCGGAGCTCCCGGACCCAGTGGTATATTTGTTTGGATATGCAAAGTTATTGTTG TCAATTGTTGAAGTTATTTGCTGTTATTATATTCCCCTTTTTTATTTTAGTGAGTGCTTGATAGTTGATACTGATTTGGA CGGACGCTATGTGGTTCTTGTTTTTGCCTTTTGCAGCTTGATCCACCTGTTAAGGAAGCTTTTGATGTCGCCTACAGCAA TATTTATGCCTTTCATGCTGCTCAGAAGTCAACTGAGAAAAGTGTTGAGAACATGAAAGTATGTCAATGCTGATTCTTGC TTCTAGCCTAGGTTAGATGGGCTAACTAGTGGCTTAATGGTTCAAGTGTGAATTGACACTTAAACGTAAAACTTTGAAGT ATTCAATGGCAAAATATGAAGAGTATCAGTATTGCTAATTGCTGTAGATATGTATTATGTTAGGCTTTTGTGAAACTGCT ATTGGAGCACTAGGTCATTGCAGCATTATCTAGGAATAGTTAAATAATACTAGAAAGATCAAATGTATAGGTTATCTGTT CCAGTTGTGATGATTTGTTTCCCTCTCCTTGATTAGTCTGTTTTCGAATATTCATCTATTTGTACATGTATGCCATGCCA TCTGATTGTCATGTCATGCCTTCATGTTTGCTCGTTCTCGGTCTTAGTGTTATCCAATAGTTTTCTGAAAATCTCAGGGA GTCCAATGCAAGAGAGTTGCTAGGAGTATTAATTCCGTGGGTCTTTATGTTCCAGGGGGAACTGCTGTGTTACCTTCAAC GGCCTTGATGCTTTCAGTTGTAAGTTGAATAAATATTCAAGTAGCTGTTATGTTGTTCAATATCCTACAGTTTTATTGTG TATATTGATATTTGTCTTTCCAGATTTAGCTGAAGTTTTTTTATTTTGTTGTGTACCAGCCTGCACAAATTGCTGGATGT AAAACTATTGTTCTTGCCAATCCTCCAACTCGGGATGGCACTACATGCAAGGTATTTGTCTATATTGTATCAAAATTATA ATTACGATGTTGTTCTGTTATTCTGACCTATGTTTTCCTGCAGGAGGTACTCTATTGTGCAAAGAAGGCTGGGGTCACTC ACATTCTTAAAGCTGGAGGAGCGCAGGTTTGAAACCTGATGATATATTTTACCCCTTAACATTTTTTGTAATTTGAATCT AATATCCTTATGAATTTCATTCTATTATATATTAATCTTTGGTTGATATGACATTTTCTTCCATCGTAGGCCATATCTGC AATGGCTTGGGGAACAGAAACTTGTCCAAAGGTAGGTAGCTTCTCATTTAACTCATCTTTTTTGTTGGGGCTTCTCTATT AGTACTTATTGAGTTCACAGCTCTTTGTTGTTATTTTTTTGTTTTGTTTTAGTATACCATAACATAACCCTAATTGCATT GCAAATTCATGATTAGATATAGTGAAACTCATCCCTTGATGGCTATTGGAATCCCCCCCCCCCAGATGTCTTGATGCATG CATTCTCAATTTGTGGTTAATGGTAACATAAATCACAGAGCCTGATGAATACATGGTGACCAAGATGTTATGTAAGAAAT TTTCTGATATTCAAGCAGGAAATTAGATACAAGGGTATGCTTTTTAAAAAACATATTTCAATTTTTTTAGGATAAATATA TAGATTTTTATAAAAAATGCAAACCTCACAGAGAAAGGAGTTTTAGAGCTCTTATCAGAATCTAGAATGAGTAGTCGAGT AGCGTCTAAAAAAAGCTAGAAGTGCTGTTGTTTTATAAAAAAAATCTTTACACACCCTAAATTTATTATGTAATCTGGTG ATAAAACAGCACTTAAGAATTAAGATGTAACCTTTACTTTTCTAACTAAGAATCAATGTACTTATATTCATATATTTTTC TATAAATTTCAATCATATACTGAAACTTTTGCAGGTTGAAAAGATTTTTGGCCCTGGAAACCAGTATGTCACAGCTGCAA AAATGATACTTCAAGTAAGTGTATCTTACATTGAAATCTCCAAATATTAATTACATTTCACACTTTGAATCTTAAGCTTC TTCCTCCTTTCTTTACTTTTTCAAAATCTTCTGCAGAACAGTGAAGCCATGGTTTCAATTGACATGCCAGCTGGTCCATC TGAAGTTTTGGTTATTGCGGACAAGAATGCAATTCCTTCTCATGTAGCTGCTGATTTGCTTTCCCAGGTTTAATGAGTTT TAAGATGCTCCTTTCCTTTCCTTTACATTATTCACTGCTTCTCTTTAACCCTGTTAGGAAGCAAACCCGCGCTCTAGTGT AATTTATACATCATCTAGCTTCTATATCTAGTTTCTACGTTATGTTGTTAGTTTTCCAAAGTTTAATAAAGGATAAATTC ATAATATTAATGTGTGGCATATCAATATGGAATTAGTTGAAGATTAATCACTAATATCTAGAAAAAAATCAGCTTTATAA ACTAAGGAGATGGTGCACATAAGGATTTCTTCTTTTGTTTGTTTAGAATCTGATTCTGATCAGAGTTCTCTTAATTGACA TTGCATGCAAAAAGACCACTAATTGGAACACCCTTTCTCCACTAAGGCAGAAAACCTACCAACATTAAAGCCCAAATGAA CCCTAAGTGCTTGACCTCCATAGAATAACCCAAGGCCCAAACCTGACAAAGACCCAAATAAACCCCGTTTTTATTCCCCC AAACACACTTCCAGATTGAGTCCTAACTTTTTTTTTGACTTTCTTTTACATTGCTGATATCTATGCCACAAATTTACAAT TTTCAGGCTGAGCATGGCCCTGATAGTCAGGTAGTTCTTGTTATTGCTGGAGACGGTGTGGACCTGAATGCAATACAGGA GGAACTCAGCAAGCAGTGCCAGAGTCTTCCAAGAGGCGAGTTTGCCTCTAAGGCACTGAGCCACAGTTTTATTGTGCATG CACGGGATATGCTTGAGGTCAGTACTGTTGTCCGAGTTTCTGGCTGTATTATACCCACTAAAAACAGTTACAAGATAAGA ACAGTAGGTGGGGAAAGTGGAAAATACTTCCTTTGGAACCTATAATACAGACGGTTAGGCCTCTTTGTTGCATAGTGTTA TACATAACATAAGTTTATTGTTAGAAAAATATCAAGAGAAGAATGTGAATAGCTAGGAACGACTAACTCAACGCTTTGTC TTCCTATGTCTATATTTATACTGAAAAATAAATCTCAGCACAACAAAGATAGTCCCAGGCTCCCAGCCCAATCATGCAAA ATAACCTAAGAAACACATGTATGGAATATTACATGTATCAACTCATGTAATATTTATGAAGTTTGAATGTTAGGGTTTTC TCTTGATATGCCAGAAATTCAGAGTTCATGGCTTTCTTTGGAAGAATTTAGAATTCAGCCTGAAATTATCTGTCAGTTTA ATGTTTATTTTTTGAAACAATTAATTGTTTAAACTTGAGTCCTACTTCTCCTCTAGCTTGTTAAGTCTCAATTTATCAAC ATCTTTATTGGAGTTTCAGAAGTAAATGTTACTTTTCCATCTTCCAGGCCATTACTTTCTCAAACTTATATGCACCTGAG CATCTAATTATCAACGTGAAGGATGCAGAGAAGTGGGAGAGTTTTATTGAGAATGCAGGTAGTATAGCCTATAGATTTTC ATCTAGTTGCTCCATTTTTAATTTATTTTTCAAATGTAAGCTCTCATTTCTGCAATCTCTGACATGGTCCAATTCCTGTT AGATAGCCACATTTTGTACCTGTAAATTGTAATGGCAATTCTACGACCCTAGATTTTAATGTCTTCCAAATGCCTCTGCA GGTTCTGTGTTTTTAGGGCAGTGGACACCTGAGAGTGTTGGTGATTATGCAAGTGGGACAAACCATGTCCTTCCTACATA TGGATATGCAAGAATGTATAGTGGGGTGTCATTGGACTCATTCCTGAAGTACATAACAGTGCAGTCTCTCACAGAGGAAG GTCTAAGAAGGCTTGGGCCATTTGTAGCAACCATGGCTGATGTTGAAGGTCTTGAAGCCCACAAGAGAGCTGTTACCTTG AGACTTCAGGACATAGAAGCCAGGCAGGTTCAGAGATGA
CDS sequence (LotjaGi6g1v0269300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCTGCGCTTACAGCTTCTAACTGGAACCGTTGCTTCCTTCATCCCCTCAACACCACCACCACCACCAGGAGGCC CTTCTCCGCCACCGCTTTCCGCGTCCGCTGCTCCATCAAGTCCTACCGTTTGTCCAACCTTTCTCACTCTGAGCTTCTCA GCCTCAAAACCCGTCCTCGCATTGATTTCTCATCGATTTTCAGTGTGGTTAACCCCATTGTTGATGATGTTCACCAAAGA GGGGATGCTGCAGTGAAAGAATATACTTCAAGGTTTGACAAAGTTGAGCTAGATAAGATAGTTGAAGTTGTCTCGGAGCT CCCGGACCCAGTGCTTGATCCACCTGTTAAGGAAGCTTTTGATGTCGCCTACAGCAATATTTATGCCTTTCATGCTGCTC AGAAGTCAACTGAGAAAAGTGTTGAGAACATGAAAGGAGTCCAATGCAAGAGAGTTGCTAGGAGTATTAATTCCGTGGGT CTTTATGTTCCAGGGGGAACTGCTGTGTTACCTTCAACGGCCTTGATGCTTTCAGTTCCTGCACAAATTGCTGGATGTAA AACTATTGTTCTTGCCAATCCTCCAACTCGGGATGGCACTACATGCAAGGAGGTACTCTATTGTGCAAAGAAGGCTGGGG TCACTCACATTCTTAAAGCTGGAGGAGCGCAGGCCATATCTGCAATGGCTTGGGGAACAGAAACTTGTCCAAAGGTTGAA AAGATTTTTGGCCCTGGAAACCAGTATGTCACAGCTGCAAAAATGATACTTCAAAACAGTGAAGCCATGGTTTCAATTGA CATGCCAGCTGGTCCATCTGAAGTTTTGGTTATTGCGGACAAGAATGCAATTCCTTCTCATGTAGCTGCTGATTTGCTTT CCCAGGCTGAGCATGGCCCTGATAGTCAGGTAGTTCTTGTTATTGCTGGAGACGGTGTGGACCTGAATGCAATACAGGAG GAACTCAGCAAGCAGTGCCAGAGTCTTCCAAGAGGCGAGTTTGCCTCTAAGGCACTGAGCCACAGTTTTATTGTGCATGC ACGGGATATGCTTGAGGCCATTACTTTCTCAAACTTATATGCACCTGAGCATCTAATTATCAACGTGAAGGATGCAGAGA AGTGGGAGAGTTTTATTGAGAATGCAGGTTCTGTGTTTTTAGGGCAGTGGACACCTGAGAGTGTTGGTGATTATGCAAGT GGGACAAACCATGTCCTTCCTACATATGGATATGCAAGAATGTATAGTGGGGTGTCATTGGACTCATTCCTGAAGTACAT AACAGTGCAGTCTCTCACAGAGGAAGGTCTAAGAAGGCTTGGGCCATTTGTAGCAACCATGGCTGATGTTGAAGGTCTTG AAGCCCACAAGAGAGCTGTTACCTTGAGACTTCAGGACATAGAAGCCAGGCAGGTTCAGAGATGA
Protein sequence (LotjaGi6g1v0269300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESALTASNWNRCFLHPLNTTTTTRRPFSATAFRVRCSIKSYRLSNLSHSELLSLKTRPRIDFSSIFSVVNPIVDDVHQR GDAAVKEYTSRFDKVELDKIVEVVSELPDPVLDPPVKEAFDVAYSNIYAFHAAQKSTEKSVENMKGVQCKRVARSINSVG LYVPGGTAVLPSTALMLSVPAQIAGCKTIVLANPPTRDGTTCKEVLYCAKKAGVTHILKAGGAQAISAMAWGTETCPKVE KIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVIADKNAIPSHVAADLLSQAEHGPDSQVVLVIAGDGVDLNAIQE ELSKQCQSLPRGEFASKALSHSFIVHARDMLEAITFSNLYAPEHLIINVKDAEKWESFIENAGSVFLGQWTPESVGDYAS GTNHVLPTYGYARMYSGVSLDSFLKYITVQSLTEEGLRRLGPFVATMADVEGLEAHKRAVTLRLQDIEARQVQR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 21 | 471 | 451 | 1.1E-284 | – | |
| PANTHER | 21 | 471 | 451 | 1.1E-284 | ||
| PIRSF | 33 | 467 | 435 | 1.1E-174 | ||
| Hamap | 45 | 465 | 421 | 63.754 | ||
| Pfam | 57 | 464 | 408 | 2.7E-159 | ||
| SUPERFAMILY | 66 | 464 | 399 | 3.33E-72 | ||
| CDD | 66 | 456 | 391 | 0.0 | ||
| Gene3D | 69 | 268 | 200 | 6.7E-112 | – | |
| TIGRFAM | 70 | 463 | 394 | 9.7E-149 | ||
| PRINTS | 70 | 94 | 25 | 2.3E-100 | ||
| PRINTS | 169 | 195 | 27 | 2.3E-100 | ||
| PRINTS | 204 | 230 | 27 | 2.3E-100 | ||
| PRINTS | 234 | 259 | 26 | 2.3E-100 | ||
| PRINTS | 266 | 287 | 22 | 2.3E-100 | ||
| ProSitePatterns | 266 | 298 | 33 | - | ||
| Gene3D | 270 | 386 | 117 | 6.7E-112 | – | |
| PRINTS | 288 | 307 | 20 | 2.3E-100 | ||
| PRINTS | 357 | 382 | 26 | 2.3E-100 | ||
| PRINTS | 398 | 416 | 19 | 2.3E-100 | ||
| Coils | 450 | 470 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Histidine biosynthetic process | The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid. | ||
| Molecular function | Histidinol dehydrogenase activity | Catalysis of the reaction: L-histidinol + NAD+ = L-histidine + NADH + H+. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. | ||
| Molecular function | NAD binding | Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0269300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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