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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0271800 |
| Transcript ID | LotjaGi6g1v0271800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Homeobox leucine-zipper protein; TAIR: AT2G34710.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|O04291|ATB14_ARATH Homeobox-leucine zipper protein ATHB-14; TrEMBL-Plants: tr|K7LBF5|K7LBF5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0271800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:58640733..58645807) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTCTTTCTATGCACAAGGACTCTTCCAACAGCATGGATTCAAGCAAGTATGTGAGGTACACTCCTGAACAAGTTGA AGCTTTGGAGAGGGTCTATGCTGAATGTCCAAAGCCGAGTTCTTTAAGGAGGCAACAACTTATCAGAGAGTGTCCTATCC TCTCCAACATTGAACCAAAACAGATCAAAGTTTGGTTCCAAAATCGCAGGTAAGCTTTTGAAAAATGCATGCTTTCAAAG TCTCTTCACTTTTTATTAACATTTCTTGAAAATGGTCTTCACCTTTAGCTTCTAATTTTCTCTCCATGTGAGAAAGTAAG GAACTTTCTCTGTTTTATCCAACTCAAACTCACTCTTCTTTGGTCCATTGCTTAATGTTTAGGACCATTTATAGATGAAT GTAATTAGATTCTAAGTTTCCAACTTTATCAAGTTTTTGGTCTGAGAAAAGTTGCTTTTGGTGGATAACAATGTTTAGTC CAAATGGGCTAGTACGGTTCTGTTTTCTTTATTTCTTCAACCATTTTTCTGTTTTTTTTTCACAAGACATTGCTAATTTT TGTGTGTAGATGTCGTGAGAAGCAGAGGAAGGAAGCTTCACGTTTGACCACAGTGAATAGGAAGCTGAGTGCTATGAACA AGCTGCTAATGGAAGAGAATGACCGTCTGCAGAAGCAGGTCTCACATCTGGTGTATGAAAATGGTTACATGAAGCAACAG ATACATACTGTGAGTCCCTCTCTCTCTCTCTTTCTCTTCCTTCATTTATTGTGTTAACTTTCTGAGTTCTGAGAATGTCA TTGTAAGCATCGTGTGTTGTTTTTTCTGAACAGGCATCTGCTGCGACCACCACAGATAATAGCTGTGAGTCTGTGGTAGT GAGTGGTCAAAATCAACAGCAAAACCCATCTCAGCATTCCCAAAGGGATGCCAACAACCCAGCTGGGTAAGAAGCTTCAC TTTTAAAATGGCTATATGCATTTTTCATTTGAATGTTTTCATGATAAACTGATTATGTAGTTTTGTTTTGTAGTCTTCTC GCTATTGCTGAGGAGACCCTGGCAGAGTTCCTATCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGAT GAAGGTATGACCTTTTCAACAATGTTATAAGATTTTAGTACTTAGTAGTATTTGTGCATCAACATTTGTTTATTGAATTT GATGTCGTATGTTTCTTTTCTTTGTGGTGTGTTGTTGTGTAGCCTGGTCCGGATTCTATTGGAATCGTTGCTGTTTCCCG CAATTGTAGTGGGATAGCGGCACGAGCCTGCGGCCTTGTGAGCCTAGAGCCCACTAAGGTATGCTGATGTATCCATGTTG CTTTGTTCTCTCCTTGCTGATCAATGGAATTGTATTTTTTGGTTATGTTTTTCTTGACTTGTGTCTGTTTGAATTTTCAT CTCAGGTTGCCGAGATTCTTAAAGATAGAATGTCTTGGTATCGTGACTGTCGATGCCTTGATGTGCTGAGTATAGTCCCT ACTGGGAGTGGGGGAACAATAGAGCTCATGTACATGCAGGTCAAGTGGCTTATTTTAATCTACAATAGAAGCTATGCTGA TGTTGAAATTCATTTCTATTTAGTTTGTCAGTCGTTTTGCTGATATGAAGCTGTTTTTTTCAGACTTATGCGCCTACAAC ATTGGCAGCAGCTCGTGACTTTTGGACATTGAGATATACTACAACTTTAGAAGATGGAAGTCTTGTGGTACTAAAATAAT CCCAGCATCTACTCTATTCCTTTTGGCCTGCATATTGACTCTTGTTGACAAATATGCTTCCATCCTTTATGCGGTTGTAA TGCCATAGTTTCTTTTGGTTAAATTTTACCATCTTATGCTTCCATTTTGTATTTTGGCTTGCTTTGTTATTGTAACTGTT GCATAAAATTTGAAGCTATCGCACATCAGGGTTGACTTACATTTACACCTTTACATTTCAAAATATTGGATATTTTTTTC TCTAACCTGTTAAATTTTTTATGATGGCAGATATGTGAGAGATCATTGACCAATTCAACTGGTGGTCCCACTGGGCCTCC TCCTTCAAACTTTACTAGAGCTGAAATGCTTCCTAGTGGCTATCTAATTCGACCTTGTGAGGGTGGTGGCTCCATTATTC ACATTGTTGATCACATAGACCTAGATGTAAGGAACACATACAGTTCAAATTATGTTTGGAATTTCCATATGTCTGGAACT TCTCTAGATTCTCAACTTTGTTATTGCATACAGGTCTGGAGTGTTCCTGAAGTGCTGAGGCCCCTCTATGAATCATCCAA AATCCTAGCTCAGAAAATGACGATTGCTGTAAGTTTAATTAATACAAGTTAAGATACGTTCAATTATGTGAATATTAATG AGCCTTATTAAATATAATTCGCAGGCCCTGCAACACATAAGACAGATAGCACAGGAGTCCAGTGGAGAAATTCAGTATGG TGGGGGACGCCAACCAGCTGTCTTAAGGACGTTTAGTCAGAGACTTTGCAGGTAAGCTCTTGGATTTGGCAATGTAGTTG TTGGTTGGGTGCATTTCACATGTTTTGATTTAATTGATATGACTTATTTTTTGTTCACATTCTTTCTAAATCATATTCTT CAGGGGGTTCAATGATGCTGTGAATGGATTTGTGGATGACGGTTGGTCAATGCTGGGTCATGATGGGGCGGAAGATGTGA CTATAACTGTAAACTCCACCCCCAACAAGTTTTTGGGGTCCAATTACAATTCGTCAATGTTCCCAGCATTTGGAGGCGGG GTCCTGTGTGCTAAAGCATCAATGCTACTGCAGGTACTTCAGAAATTATTTACGTCATGAACTACTGTATAACAATAATC AACACCATGAACTATTCATATTGATTTCTTTTGCAATGCTGAGCTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGATTCC TGAGGGAGCATAGATCAGAGTGGGCTGATTATGGGGTTGATGCGTACTCTGCCGCTTGTCTTAAGGCTAGTCCCTATGCA GTTCCTTGTGCAAGACCTGGTGGTTTCCCCAGCACTCAGGTTATTTTACCACTTGCTCATACCATTGAGCATGAGGAGGT ATTACCCCTAACTACATGACATCTTTCATTCTGTTCTTTGCATAACATATGCTCATCTGTGATTTACCACAATTGTGCAG TTCCTGGAGGTAGTTCGAATAGAGGGTCATGCATTCTCCCCTGAAGACGTGGCATTAGCACGTGATATGTATCTATTGCA GGTAAAGTTATGTGCTTGAATGCCTGGAGGTAAATGTAGAAGTTATAGGTGGTTCTGTAAATGCTTCTTAATGACGTTTG TGCTATGCAACTTGATATGGCAGCTATGCAGTGGAGTTGATGAAAATGCAATTGGGGCATGTGCTCAGCTGGTGTTTGCA CCAATTGATGAATCATTTGCTGATGATGCTCTCTTACTGCCTTCAGGCTTTCGTGTCATCCCATTGGATCCTAAAACAGT GAGTGTCTACTCGTCTGGTTTAATGGAGCTTTGTTACGAAACTGATATGGAATGTTTTATCATTATAGTTAGACTTCTGT AGTAGGGCTCTACTCAACCTTGTGTTAGCCAATTGTTAGATCAAAATTTCTCTATAGTTTCAATGCGTTAATTGTTGGTT AGGCAGTGTAGTTCAATTGACTCACTAAATCAATATCTTGTTTGGTACCTCTTTTCGGGTAATACTGTACTAGAAAGTAA TAATCCTAGGGCTTCCATATAAATACGGTTGCATGTTGACTTGCTAAATGTCTTTGTTTTTGTTTCTTTTGAAACTCAGG ATGGATCAGCTGCGTCTAGGACATTGGATTTGGCATCGACACTTGAAGTAGGTTCTGGTAGTACTCGTCCAGCTGGTGAA GCTGATGGTTACAACCTTAGGTCGGTCCTCACAATTGCATTTCAATTTACCTTCGAGAACCATTTAAGGGACAATGTTGC TGCTATGGCCCGTCAGTATGTGCGTAGTGTTGTGGGATCAGTTCAGAGGGTTGCCATGGCAATTGCTCCCTCTCGACTCA GCACCCAGATGGGCCCGAAACCACTTCCTGGTTCACCAGAGGCTGTTACCTTGGTTCGTTGGATCTGTAGAAGTTACAGG TGTGTCTTCTATTAATTCCAAAGTATACTGAGATTAGTTAGCATAACCCATGATTGGCCGATGTTTATGGTTCAAATTCA TGACCTGGAATTGAAAATGATTATCTTGTTCCTAGTTATGATCTGACAGTTTGAAGTTTGATTTGCAGGATTCACACTGG AGCAGATCTTTTTAGAGTTGAGTCTACAGCTGGTGATGCTATCTTGAAGCAACTTTGGCAACATTCTGATGCAATCTTGT GCTGTTCTGTGAAAACAAATGTAATTACTTGCATTGGTCCTTAACTTCTCTTTATTTAAACCTGAATAGTTAATTAGTTG TCTGAGTTTGTTTATAACCTGCTATTGTTTACTGAACTTCCCATTTAGTAATACTCTATTTGCAAAATTATTTCAGGCAG CTCCGGTGTTCACCTTTGCAAATCAGGCTGGACTAGACATGCTTGAAACTACTCTGGTTGCCCTTCAAGATATCATGCTT GATAAAGTTCTTGATGAAGGTGGCAGGAAGATTCTTTGCTCTGAATTCTCCAAGATAATGACACAGGTGATTAATGAATA CTTCATCATGTTAGTTTAGGCCCTCATCCTTGTGATTATTACTTCCAAAATATGAGGAATAGTTTTGTATTGTTACACTT ATTACAAATATGTGTGGAAAATTGATTTACTTGAATTGTGCATTGAAACTTAAAATTAGGATATTTATGTCCCTACCTCT TTCTATTCTTCTGAGTTACTTGCTAACTAATGACTGTTTCTTTTTCAGGGTTTTGCATCTCTTCCGGCAGGGATATGTGT ATCCAGTATGAATCGACCAGTCTCCTATGATCAGGCCATTGCATGGAAAGTTCTCAATGATGATGATTCCAATCACTGCC TGGCCTTCATGTTTGTGAACTGGTCTTTTGTCTGA
CDS sequence (LotjaGi6g1v0271800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCTTTCTATGCACAAGGACTCTTCCAACAGCATGGATTCAAGCAAGTATGTGAGGTACACTCCTGAACAAGTTGA AGCTTTGGAGAGGGTCTATGCTGAATGTCCAAAGCCGAGTTCTTTAAGGAGGCAACAACTTATCAGAGAGTGTCCTATCC TCTCCAACATTGAACCAAAACAGATCAAAGTTTGGTTCCAAAATCGCAGATGTCGTGAGAAGCAGAGGAAGGAAGCTTCA CGTTTGACCACAGTGAATAGGAAGCTGAGTGCTATGAACAAGCTGCTAATGGAAGAGAATGACCGTCTGCAGAAGCAGGT CTCACATCTGGTGTATGAAAATGGTTACATGAAGCAACAGATACATACTGCATCTGCTGCGACCACCACAGATAATAGCT GTGAGTCTGTGGTAGTGAGTGGTCAAAATCAACAGCAAAACCCATCTCAGCATTCCCAAAGGGATGCCAACAACCCAGCT GGTCTTCTCGCTATTGCTGAGGAGACCCTGGCAGAGTTCCTATCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGAT GATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTGTTTCCCGCAATTGTAGTGGGATAGCGGCACGAGCCT GCGGCCTTGTGAGCCTAGAGCCCACTAAGGTTGCCGAGATTCTTAAAGATAGAATGTCTTGGTATCGTGACTGTCGATGC CTTGATGTGCTGAGTATAGTCCCTACTGGGAGTGGGGGAACAATAGAGCTCATGTACATGCAGACTTATGCGCCTACAAC ATTGGCAGCAGCTCGTGACTTTTGGACATTGAGATATACTACAACTTTAGAAGATGGAAGTCTTGTGATATGTGAGAGAT CATTGACCAATTCAACTGGTGGTCCCACTGGGCCTCCTCCTTCAAACTTTACTAGAGCTGAAATGCTTCCTAGTGGCTAT CTAATTCGACCTTGTGAGGGTGGTGGCTCCATTATTCACATTGTTGATCACATAGACCTAGATGTCTGGAGTGTTCCTGA AGTGCTGAGGCCCCTCTATGAATCATCCAAAATCCTAGCTCAGAAAATGACGATTGCTGCCCTGCAACACATAAGACAGA TAGCACAGGAGTCCAGTGGAGAAATTCAGTATGGTGGGGGACGCCAACCAGCTGTCTTAAGGACGTTTAGTCAGAGACTT TGCAGGGGGTTCAATGATGCTGTGAATGGATTTGTGGATGACGGTTGGTCAATGCTGGGTCATGATGGGGCGGAAGATGT GACTATAACTGTAAACTCCACCCCCAACAAGTTTTTGGGGTCCAATTACAATTCGTCAATGTTCCCAGCATTTGGAGGCG GGGTCCTGTGTGCTAAAGCATCAATGCTACTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGATTCCTGAGGGAGCATAGA TCAGAGTGGGCTGATTATGGGGTTGATGCGTACTCTGCCGCTTGTCTTAAGGCTAGTCCCTATGCAGTTCCTTGTGCAAG ACCTGGTGGTTTCCCCAGCACTCAGGTTATTTTACCACTTGCTCATACCATTGAGCATGAGGAGTTCCTGGAGGTAGTTC GAATAGAGGGTCATGCATTCTCCCCTGAAGACGTGGCATTAGCACGTGATATGTATCTATTGCAGCTATGCAGTGGAGTT GATGAAAATGCAATTGGGGCATGTGCTCAGCTGGTGTTTGCACCAATTGATGAATCATTTGCTGATGATGCTCTCTTACT GCCTTCAGGCTTTCGTGTCATCCCATTGGATCCTAAAACAGATGGATCAGCTGCGTCTAGGACATTGGATTTGGCATCGA CACTTGAAGTAGGTTCTGGTAGTACTCGTCCAGCTGGTGAAGCTGATGGTTACAACCTTAGGTCGGTCCTCACAATTGCA TTTCAATTTACCTTCGAGAACCATTTAAGGGACAATGTTGCTGCTATGGCCCGTCAGTATGTGCGTAGTGTTGTGGGATC AGTTCAGAGGGTTGCCATGGCAATTGCTCCCTCTCGACTCAGCACCCAGATGGGCCCGAAACCACTTCCTGGTTCACCAG AGGCTGTTACCTTGGTTCGTTGGATCTGTAGAAGTTACAGGATTCACACTGGAGCAGATCTTTTTAGAGTTGAGTCTACA GCTGGTGATGCTATCTTGAAGCAACTTTGGCAACATTCTGATGCAATCTTGTGCTGTTCTGTGAAAACAAATGCAGCTCC GGTGTTCACCTTTGCAAATCAGGCTGGACTAGACATGCTTGAAACTACTCTGGTTGCCCTTCAAGATATCATGCTTGATA AAGTTCTTGATGAAGGTGGCAGGAAGATTCTTTGCTCTGAATTCTCCAAGATAATGACACAGATGACTGTTTCTTTTTCA GGGTTTTGCATCTCTTCCGGCAGGGATATGTGTATCCAGTATGAATCGACCAGTCTCCTATGA
Protein sequence (LotjaGi6g1v0271800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALSMHKDSSNSMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEAS RLTTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTASAATTTDNSCESVVVSGQNQQQNPSQHSQRDANNPA GLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLVSLEPTKVAEILKDRMSWYRDCRC LDVLSIVPTGSGGTIELMYMQTYAPTTLAAARDFWTLRYTTTLEDGSLVICERSLTNSTGGPTGPPPSNFTRAEMLPSGY LIRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKILAQKMTIAALQHIRQIAQESSGEIQYGGGRQPAVLRTFSQRL CRGFNDAVNGFVDDGWSMLGHDGAEDVTITVNSTPNKFLGSNYNSSMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHR SEWADYGVDAYSAACLKASPYAVPCARPGGFPSTQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGV DENAIGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKTDGSAASRTLDLASTLEVGSGSTRPAGEADGYNLRSVLTIA FQFTFENHLRDNVAAMARQYVRSVVGSVQRVAMAIAPSRLSTQMGPKPLPGSPEAVTLVRWICRSYRIHTGADLFRVEST AGDAILKQLWQHSDAILCCSVKTNAAPVFTFANQAGLDMLETTLVALQDIMLDKVLDEGGRKILCSEFSKIMTQMTVSFS GFCISSGRDMCIQYESTSLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 815 | 809 | 0.0 | – | |
| PANTHER | 7 | 815 | 809 | 0.0 | – | |
| Gene3D | 8 | 83 | 76 | 1.0E-19 | – | |
| ProSiteProfiles | 12 | 76 | 65 | 15.742 | ||
| SMART | 14 | 80 | 67 | 8.6E-16 | ||
| Pfam | 17 | 75 | 59 | 1.9E-16 | ||
| SUPERFAMILY | 17 | 80 | 64 | 8.98E-17 | ||
| CDD | 17 | 77 | 61 | 1.84088E-17 | ||
| CDD | 69 | 108 | 40 | 3.46413E-6 | – | |
| Coils | 86 | 106 | 21 | - | – | |
| MobiDBLite | 136 | 156 | 21 | - | – | |
| ProSiteProfiles | 155 | 356 | 202 | 24.579 | ||
| CDD | 159 | 375 | 217 | 8.74212E-71 | – | |
| SMART | 164 | 374 | 211 | 1.2E-50 | ||
| Pfam | 165 | 372 | 208 | 1.2E-51 | ||
| SUPERFAMILY | 165 | 376 | 212 | 9.2E-37 | – | |
| Gene3D | 198 | 380 | 183 | 3.9E-19 | ||
| Pfam | 697 | 813 | 117 | 8.2E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of LotjaGi6g1v0271800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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