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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0281500 |
| Transcript ID | LotjaGi6g1v0281500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 and GRAM domain-containing protein; TAIR: AT1G03370.2 C2 calcium/lipid-binding and GRAM domain containing protein; Swiss-Prot: sp|Q9ZVT9|C2GR1_ARATH C2 and GRAM domain-containing protein At1g03370; TrEMBL-Plants: tr|A0A0B2S6D4|A0A0B2S6D4_GLYSO C2 and GRAM domain-containing protein; Found in the gene: LotjaGi6g1v0281500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:59788178..59794213) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAGCTTGTGGTTCGGGTGATTGAAGGAAGGAACTTGCCACCGATGGATCCTAATGGGTTGAGTGATCCGTACGTGAG GCTGCAGTTGGGGAAGCAGAGGTTCAGGACTAAGGTGATCAAGAAGAGTTTGAATCCCAAGTGGGATGAAGAGTTTAGCT TTAGGGTGGAAGACCTTAATGAAGAGCTTGTTATCTCTGTCATGGATGAAGATAAGTTCTTCAATGATGACTTTATGGGC CAGCTTAGAGTTCCAGTCTCACTTGTTTTTGAGGAGGATATCAAATCCCTTGGCACTGCTTGGTATACTTTGACACCCAA AAGCAAGAAGTTCAAGAACAAGGAGTCTGGTGAGTTATTCTGCTGAATTAAACTCTTGTTGTATCCTGTAGTTTATTGCT TAGTACTTACCTATAAATGGTGTGGCCACATTTTTGCTTCTTTCTCAACTAGCAGTTATGTTGTTTATTTATGTCATATG TAAATCCCTAGTTTGATTAAGGTTTAGCCACATCACATTGGCACTCAAATGGTTTTTGATCATTGCAATAGATCAATTTG TTCTCACTAAGAAGTAGCTTGTGGAGTATTTTGATGTCAAAAAGGTATCATTTAAGAAACAATTTGATGCAGTAATATTT CGAAAACCAAATTGATGTTCTGAAAGCTAAGACCAAATGAGGTTTTACCCTACTTAATTGTGTTAACCTCCGCTGCTATA TCGGCTTTGTACTTTATTTACATAACAGATAACATGATGTGACGCCATGATGCTCATAGTCGTAGATAACGTGGTCTATA TTGCTCTATTTCTAACCTGAGACTATGGATTGTACATCTCAAAGGGCATTTCGATATGTACAATCCATAGTCTCGACATT GCTAAGTAGACCTTGTTATCTGTAGGCATCATGGCGTGAACTGATCTGTCTAGCTGATTCAGTTATTTGAAAAGGCTTAG GGTGTGTTTGTTTTTCTGTTGGCTTCCGTTGCAATGCTGTTCCATGTCACATTCCTGATTTCTGAGGCACATTCAGCTGA CAAAGCTCACTTGTTGGATTGCTTAAACGTCTGTTCACGTTGCTCCAACAACTATTCAAACACACCATTAGTTGTTGACA TTGTTTATACACCCAAGTCTTTTTGGAAAATAATGTGCTTAATAACTGTGAACATGAATGTATGAATCTTGATTTTGCTG TTATCTTTAACTTCAACTCTTGTCATTTTTTTTGTCAGGTGAGATTCGTTTGCACATTTACTTTTCACAAAAGAGCGCAT CTGTGGAGTCAAACGTTAATGGTGATCTGTTATTCCATCCAAGAAAACTTGCTGATTCAGCTACTGAATCGCCTTCGAGA TCTTCCACGGGTCATTCAAGCTCATCTTCTCCTCTGAGGGAAGATATTGTGTCTGCTAAGGATGAAAAGTCTGGTACACA AAAAACACTCACAGGCAGAATTGCTCAAATCTTTAATAAGAGCTCTGATATGTCTTCAACCCCATCCCGGAGAAGCATTG ACTCAGACCAATCTGAAATTAGTAAAGCAGAAATTAGTGAGATCACAACTGAGGATCAGTCCACTCCTCAGTCCACTAAT GAGACTTTTGAAGAAGCTATGAGAAAAATGCAGTCAGCAGATCAAGGCAGTGAAATTCCTAGCAACCTACCACTAGGGGT GTTTATTGATCAACACTATATTATTGCACCAGAAGACTTGAACAAGTTTCTATTTTCATCTGAATCAGATTTTCTAAAGT CATTGACAGAGATTCAGGGTAATACGGAATTGCAAATTGGTCCTTGGAAGTTTGAGAATGGCGGCGAGAGCTTCAAAAGA TTAGTTACATACGTCAAGGCTCCCAGTAAGTTAATTAAGGCTGTCAAAGCCTATGAGGAACACACATATTTAAAAGCTGA TGGGAAGAACTTCGCTGTTCTAGCCAGTGTCAGCACTCCTGATGTTATGTATGGGAGTACCTTTAGGGTTGAAGTACTCT ATGTGATCACACCTGGACCAGAGTTGCCCTCAGAAGAACAGTGTTCACGTCTGGTTGTATCATGGCGAATGAATTTTTTA CAGAGCACCATGGTTAAAGGAATGATCGAAAATGGGGCTCGACAAGGTATGAAAGAAAGCTTTCAGCAGTATGCTGATTT GTTATCTCAGACTGTTAAACCTTTTGATTTAAAGGACCTTAGTTCTGGTAAGGAACAAGCTTTGGCATCATTACATGCAG AGCCCCAGTCAGATTGGAAGCTGGCAGTGCAGTATTTTGCTAATTTCACAGTAGTCTCAACCATTTTCATGGGATTGTAT GTGCTTGTGCACATATGGCTGGCTGCACCCAGTACCATTCAAGGGCTTGAGTTTGTGGGACTTGACTTGCCAGATACAAT TGGTGAATTTGTTGTTTGTGCTGTCTTGGTTCTTCAAGGGGAACGCATGCTGCGTTTAATCTCACGCTTCATACAAGCCA GAGCACGAAAAGGTAATCCCACATTGATTGAATTCAAACATTTCATGTTTCAACCTTCTGGTTTTCTCCTTGACTTAGTG TTGCTTTTAATCGAGTTGCTTTGAGTTTGTTTCCCACTCATCTCTTAATTGTTCAGTGTGCGTTTACTTAATTTAATGCC CATGTATTGAATATTTTTTTGGTACTCCAATATTAGGCAGTGACCATGGAATTAAAGCACAAGGAGACGGGTGGTTACTA ACTGTTGCCTTGATTGAAGGAAGCAATTTAGCTTCTGTTGATTCTAGTGGGTTCTCTGATCCATATGTGGTGTTTACTTG CAATGGGAAAACAAGAACCAGTTCAATCAAGTTCCAGAAATCAAACCCTTTATGGAATGGTGAATATCATGATATCATTT ATTATTTGTTGTCTTATAATTTGAATATAAACAAATCTATGAATGCTGTGATCTAATACTTAACTCTACTTTTCCCTCTA ACTGATCTGTATTATCATATGATCAATTGATTTTGTCAAGAATATTGTCTATCTCTACAGAAATATTTGAGTTTGATGCA ATGGACGATCCTCCTTCTGTGCTGGATGTGGAAGTTTATGATTTTGATGGGCCTTTTGATGAAGCTGCATCTCTAGGACA TGCTGAAATTAATTTTCTAAAAGCAAACATTTCAGATCTTGCTGATATATGGGTTCCTCTTGAAGGAAATTTGGCTTTGG CAGTTCAGTCTAAGCTGCACTTAAGAATTTTCTTGGACAACACTAGAGCTGGAAATGTTGCAAAAGAATATTTAAATAAA ATGGAGAAAGAGGTTGGGAAGAAGGTATGTAAAACACTTAGCTTTTTCAGTGTTGTAATCCTCTTTTTCCATCCTTCTTT CTTTCTGACTTCTTTTAAAAACATTGTAGATTAATTTGCGGTCTCCTCAAACAAATTCAGCATTCCAGAAACTCTTCGGG CTTCCACCTGAGGAATTTCTCATCAATGATTTCACCTGTCATTTGAAAAGAAAAATGGTCCTGCAGGTGTGGTTATTATA TGATTTGATTTTGAAAGTCACATTCAACTTTTCTCTTTGGTATTTATTGGTACATGCTTCTTTGGTATTATCTCATCAAG TTGCCAATGTTTCTCTCCAGGGCCGCCTATTTCTGTCCGCAAGAATAATTGGATTTCATGCAAATTTGTTTGGAAAGAAG ACAAATTTCTTTTTTCTTTGGGAAGATATTGAAGACATTCAGGTCATTCCTCCTACATTTTCATCAATGGGGAGTCCAAT AATTGTCATAACTCTTCGGCCAGGTAGAGGTACCGATGCAAGACATGGTGCAAAAACACAAGATCAACAAGGCAGGCTAA AGTTCCATTTCCAGTCCTTTGTGTCTTTTGGTGTTGCACACAGGTAACTTATTTCTTATGTATAAATAGCTTCAACTTCT ATGATAATTTTCGGTGTTCTCTGTTTTGCCAATCTTTTTTCCTTTGCCCTGTTTGTTTAGGTATATAGCAATACTGGCAC ACTTTCATAATCATGGTAGCCAAAGTCTCAATTTCGATCCCTTAATCTTACAATTATGCAATTACAATGCACCTGTGCGA ATAAAATCTGTCGCATAATCCTTTTCTGACTAAATCTGACCTTACACGCGATTAAAATTGCATAATAGCACCTTAATCCC GATTATGCGATTAAGCTCGAGTGCTCGACCCATGTGATGCGGCTCTACCTCACTTCCTAAATGTGGCCCCTTTCGCAAAG CCCCTAATTTTTTTAGCAGCCAAGCCTTCTTCTCATACTCACGTTTGTGAGCCCCCTTCTTTCCCCCATTGCACCGACAA TGACGCTTTGACACCTTCGATGTGGCTCCTCCGCCGGGGACAGGAGACTGTCACTGGGGTTGGTAAGTCAAGTGGTGGTG CTGGGACTGGGGCTAGTACTGAGGCAGTTTTAGTATGACATTCCTATGAATTATGAGTTACAAAGTACAACTTTATTTAA GTGTTTTTATTTAAAGTGCTTTTATTTATTTATGCTGTTTATATGCATATACCATATATAGGAATTTTGCTGAATCTTAC GAGATTGATTTACAATTAACACCCCCGTCCTCGATTAAAGGCATAATCTCGATTTTGACTACCTTGAATTTTGGTTTCTT GTATTTCTCAATAATAGAAAGAAAATCCATGTTTGATCTTAGTGCAGTTCAGTAATTGTTTGTACAATACATGGATTGTG AAACATGGGCACTTTGTTATATAGAAATATATGACAAGTGTTTTTCTTCCAGCTATTTGATTATTATTTTGACAAATTCA TAGTTGCTTCTCAATTGCTCTGCCCCTATTCTCTCTACATAGATTTTGATGTGAGTTTTTCTGTAACCACCATAAATATT TCCTAGTTTTCAGAGGCTTTTCTGGCTCATCTAACTTGTTATATGATGCTTATATCTCTGAGTATGATGTGAAATGAAAT ATCCCTATTTCTAAGAAAAATATATGAAAATGTAACATTTATTATTATAGAAGATATTTTGTGTTACTAAGAAACTTTGA ATTGGTTGTATAGAACTATCATGGCTCTCTGGAAGGCCAGATCCTTGAGTCCTGAACAGAAGATCAAAGTTGTTGAAGAG GAATCTGACACCAAAAGCCTTATAAGTGAAGAAAGTGGCGGCTCATTACTTGGCCTGGATGACGTTAGCATGTCTGAGAT TTATTCCTGTGCTCTTCCAATTCCTGTAATCTCTCTTTGTCCTCTAACACATGTCCACTAATCTGTGCCACTTATTCAAT TTTCAGCACACTTTTGCTATTGCTCCTGTTTGATTATATTTCTTTTCCTTTAATTAATGTAGGCCAGTTTCCTCATGGAG CTATTTAGCGGAGGAGAGTTGGATCGTCGGGTCATGGAAAAATCTGGTTGTCTTAATTATTCTTATACTCCTTGGGTATC AGAGAACAAGGATATCTCTGAGAGGGCAGTATATTACAAATTTGAGAAGCGTGTTTCGAGTTATAAAGGTGAAGTGACAA GTACTCAGCAAAGATCTCCCCTTTTGGATGGAAAGGGTTGGCTTGTGGAAGAAGTTATGAATATTCATGGAGTTCCTCTT GGCGATCATTTCAATGTAAGTTGACTCAAATCTTGGTTGTTTCAACACTTTCAGCGCCTGATCGTTATATACTTGTTTTC TATGATTTATAGCATGTTTAAATCAGCTTATTTTCCTTGGAATCAATTCTGGCACCAGACGTTTCTCGCAAACTTCTTCC GATAATTGATTTGTCCTTTAGAATCAATTTTATCATTTCATCACCTTGCACTACTGAGTAGTGTCTGTCTCCTATATGCA ACAGATACACCTTCGCTACCAAATTGAGGATTCACCCCCAAAAGCAAAAGGATGTAGAGTACAAGTATTATTTGGACTTG AATGGCTGAAAAGCACAAAGAATCAGAAAAGGATTACAAAGAACATCCAACAAAATCTGCAGGAGCGTTTAAAGGTGACC TTTAGTCTAGCTGAGAAGGAGCTTTTACCAAAATAG
CDS sequence (LotjaGi6g1v0281500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCTTGTGGTTCGGGTGATTGAAGGAAGGAACTTGCCACCGATGGATCCTAATGGGTTGAGTGATCCGTACGTGAG GCTGCAGTTGGGGAAGCAGAGGTTCAGGACTAAGGTGATCAAGAAGAGTTTGAATCCCAAGTGGGATGAAGAGTTTAGCT TTAGGGTGGAAGACCTTAATGAAGAGCTTGTTATCTCTGTCATGGATGAAGATAAGTTCTTCAATGATGACTTTATGGGC CAGCTTAGAGTTCCAGTCTCACTTGTTTTTGAGGAGGATATCAAATCCCTTGGCACTGCTTGGTATACTTTGACACCCAA AAGCAAGAAGTTCAAGAACAAGGAGTCTGGTGAGATTCGTTTGCACATTTACTTTTCACAAAAGAGCGCATCTGTGGAGT CAAACGTTAATGGTGATCTGTTATTCCATCCAAGAAAACTTGCTGATTCAGCTACTGAATCGCCTTCGAGATCTTCCACG GGTCATTCAAGCTCATCTTCTCCTCTGAGGGAAGATATTGTGTCTGCTAAGGATGAAAAGTCTGGTACACAAAAAACACT CACAGGCAGAATTGCTCAAATCTTTAATAAGAGCTCTGATATGTCTTCAACCCCATCCCGGAGAAGCATTGACTCAGACC AATCTGAAATTAGTAAAGCAGAAATTAGTGAGATCACAACTGAGGATCAGTCCACTCCTCAGTCCACTAATGAGACTTTT GAAGAAGCTATGAGAAAAATGCAGTCAGCAGATCAAGGCAGTGAAATTCCTAGCAACCTACCACTAGGGGTGTTTATTGA TCAACACTATATTATTGCACCAGAAGACTTGAACAAGTTTCTATTTTCATCTGAATCAGATTTTCTAAAGTCATTGACAG AGATTCAGGGTAATACGGAATTGCAAATTGGTCCTTGGAAGTTTGAGAATGGCGGCGAGAGCTTCAAAAGATTAGTTACA TACGTCAAGGCTCCCAGTAAGTTAATTAAGGCTGTCAAAGCCTATGAGGAACACACATATTTAAAAGCTGATGGGAAGAA CTTCGCTGTTCTAGCCAGTGTCAGCACTCCTGATGTTATGTATGGGAGTACCTTTAGGGTTGAAGTACTCTATGTGATCA CACCTGGACCAGAGTTGCCCTCAGAAGAACAGTGTTCACGTCTGGTTGTATCATGGCGAATGAATTTTTTACAGAGCACC ATGGTTAAAGGAATGATCGAAAATGGGGCTCGACAAGGTATGAAAGAAAGCTTTCAGCAGTATGCTGATTTGTTATCTCA GACTGTTAAACCTTTTGATTTAAAGGACCTTAGTTCTGGTAAGGAACAAGCTTTGGCATCATTACATGCAGAGCCCCAGT CAGATTGGAAGCTGGCAGTGCAGTATTTTGCTAATTTCACAGTAGTCTCAACCATTTTCATGGGATTGTATGTGCTTGTG CACATATGGCTGGCTGCACCCAGTACCATTCAAGGGCTTGAGTTTGTGGGACTTGACTTGCCAGATACAATTGGTGAATT TGTTGTTTGTGCTGTCTTGGTTCTTCAAGGGGAACGCATGCTGCGTTTAATCTCACGCTTCATACAAGCCAGAGCACGAA AAGGCAGTGACCATGGAATTAAAGCACAAGGAGACGGGTGGTTACTAACTGTTGCCTTGATTGAAGGAAGCAATTTAGCT TCTGTTGATTCTAGTGGGTTCTCTGATCCATATGTGGTGTTTACTTGCAATGGGAAAACAAGAACCAGTTCAATCAAGTT CCAGAAATCAAACCCTTTATGGAATGAAATATTTGAGTTTGATGCAATGGACGATCCTCCTTCTGTGCTGGATGTGGAAG TTTATGATTTTGATGGGCCTTTTGATGAAGCTGCATCTCTAGGACATGCTGAAATTAATTTTCTAAAAGCAAACATTTCA GATCTTGCTGATATATGGGTTCCTCTTGAAGGAAATTTGGCTTTGGCAGTTCAGTCTAAGCTGCACTTAAGAATTTTCTT GGACAACACTAGAGCTGGAAATGTTGCAAAAGAATATTTAAATAAAATGGAGAAAGAGGTTGGGAAGAAGATTAATTTGC GGTCTCCTCAAACAAATTCAGCATTCCAGAAACTCTTCGGGCTTCCACCTGAGGAATTTCTCATCAATGATTTCACCTGT CATTTGAAAAGAAAAATGGTCCTGCAGGTGTGGGCCGCCTATTTCTGTCCGCAAGAATAA
Protein sequence (LotjaGi6g1v0281500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLVVRVIEGRNLPPMDPNGLSDPYVRLQLGKQRFRTKVIKKSLNPKWDEEFSFRVEDLNEELVISVMDEDKFFNDDFMG QLRVPVSLVFEEDIKSLGTAWYTLTPKSKKFKNKESGEIRLHIYFSQKSASVESNVNGDLLFHPRKLADSATESPSRSST GHSSSSSPLREDIVSAKDEKSGTQKTLTGRIAQIFNKSSDMSSTPSRRSIDSDQSEISKAEISEITTEDQSTPQSTNETF EEAMRKMQSADQGSEIPSNLPLGVFIDQHYIIAPEDLNKFLFSSESDFLKSLTEIQGNTELQIGPWKFENGGESFKRLVT YVKAPSKLIKAVKAYEEHTYLKADGKNFAVLASVSTPDVMYGSTFRVEVLYVITPGPELPSEEQCSRLVVSWRMNFLQST MVKGMIENGARQGMKESFQQYADLLSQTVKPFDLKDLSSGKEQALASLHAEPQSDWKLAVQYFANFTVVSTIFMGLYVLV HIWLAAPSTIQGLEFVGLDLPDTIGEFVVCAVLVLQGERMLRLISRFIQARARKGSDHGIKAQGDGWLLTVALIEGSNLA SVDSSGFSDPYVVFTCNGKTRTSSIKFQKSNPLWNEIFEFDAMDDPPSVLDVEVYDFDGPFDEAASLGHAEINFLKANIS DLADIWVPLEGNLALAVQSKLHLRIFLDNTRAGNVAKEYLNKMEKEVGKKINLRSPQTNSAFQKLFGLPPEEFLINDFTC HLKRKMVLQVWAAYFCPQE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 729 | 729 | 0.0 | – | |
| ProSiteProfiles | 1 | 83 | 83 | 20.846 | ||
| PANTHER | 1 | 729 | 729 | 0.0 | – | |
| Phobius | 1 | 461 | 461 | - | – | |
| Gene3D | 1 | 139 | 139 | 1.8E-42 | ||
| Pfam | 2 | 103 | 102 | 7.6E-30 | ||
| SMART | 2 | 98 | 97 | 1.6E-24 | ||
| SUPERFAMILY | 2 | 127 | 126 | 1.03E-35 | – | |
| CDD | 3 | 104 | 102 | 2.51988E-33 | – | |
| PRINTS | 18 | 30 | 13 | 3.1E-8 | ||
| PRINTS | 42 | 55 | 14 | 3.1E-8 | ||
| PRINTS | 63 | 71 | 9 | 3.1E-8 | ||
| MobiDBLite | 148 | 243 | 96 | - | – | |
| MobiDBLite | 151 | 171 | 21 | - | – | |
| MobiDBLite | 180 | 211 | 32 | - | – | |
| MobiDBLite | 219 | 243 | 25 | - | – | |
| ProSiteProfiles | 261 | 433 | 173 | 35.314 | ||
| Pfam | 266 | 413 | 148 | 3.8E-31 | ||
| Phobius | 462 | 484 | 23 | - | – | |
| Phobius | 485 | 503 | 19 | - | – | |
| Phobius | 504 | 524 | 21 | - | – | |
| Phobius | 525 | 739 | 215 | - | – | |
| Gene3D | 532 | 667 | 136 | 2.8E-24 | ||
| SUPERFAMILY | 547 | 669 | 123 | 1.93E-24 | – | |
| Pfam | 548 | 649 | 102 | 6.1E-16 | ||
| SMART | 548 | 646 | 99 | 1.5E-14 | ||
| ProSiteProfiles | 549 | 631 | 83 | 13.964 | ||
| CDD | 549 | 649 | 101 | 6.35949E-19 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0281500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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